Overlapping genes: a new strategy of thermophilic stress tolerance in prokaryotes

scientific article published on 13 December 2014

Overlapping genes: a new strategy of thermophilic stress tolerance in prokaryotes is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1007/S00792-014-0720-3
P698PubMed publication ID25503326

P2093author name stringTapash Chandra Ghosh
Arup Panda
Soumita Podder
Deeya Saha
P2860cites workMammalian overlapping genes: the comparative perspective.Q35728678
Genome reduction promotes increase in protein functional complexity in bacteriaQ36480414
Same-strand overlapping genes in bacteria: compositional determinants of phase bias.Q36889689
Growth temperature and genome size in bacteria are negatively correlated, suggesting genomic streamlining during thermal adaptationQ36905240
The effect of gene overlapping on the rate of RNA virus evolutionQ37003107
Prevalent genome streamlining and latitudinal divergence of planktonic bacteria in the surface oceanQ37010628
Comparative study of overlapping genes in bacteria, with special reference to Rickettsia prowazekii and Rickettsia conoriiQ37864918
Genome reduction in prokaryotic obligatory intracellular parasites of humans: a comparative analysisQ37866068
Overlapping coding regions and trancriptional units of two essential chromosomal genes (CCT8, TRP1)in the fungal pathogen Candida albicansQ39725705
Role of ribosome recycling factor (RRF) in translational couplingQ40430140
Origin and length distribution of unidirectional prokaryotic overlapping genesQ41864017
Variation in global codon usage bias among prokaryotic organisms is associated with their lifestylesQ41959537
A pair of partially overlapping Arabidopsis genes with antagonistic circadian expressionQ42549989
Overlapping genes produce proteins with unusual sequence properties and offer insight into de novo protein creationQ42570606
Optimum growth temperature and the base composition of open reading frames in prokaryotes.Q43014566
A novel method for estimating ancestral amino acid composition and its application to proteins of the Last Universal AncestorQ43015409
Origin and evolution of overlapping genes in the family MicroviridaeQ47219210
OTC and AUL1, two convergent and overlapping genes in the nuclear genome of Arabidopsis thalianaQ47911315
A powerful non-homology method for the prediction of operons in prokaryotesQ48625522
Thermal analysis of CHL V79 cells using differential scanning calorimetry: implications for hyperthermic cell killing and the heat shock response.Q52552056
Evolution of relative reading frame bias in unidirectional prokaryotic gene overlaps.Q53063071
Why genes overlap in viruses.Q55053051
Evolution of Gene Overlaps: Relative Reading Frame Bias in Prokaryotic Two-Component System GenesQ63889333
Strategies for genome reduction in microbial genomesQ80091307
Seasonal variation in cell volume of epilimnetic bacteriaQ86670065
Overlapping genes in the human and mouse genomesQ21263185
Properties of overlapping genes are conserved across microbial genomesQ22065755
Evidence of Selection upon Genomic GC-Content in BacteriaQ24502896
OMA 2011: orthology inference among 1000 complete genomesQ24610080
Thermophilic bacteria strictly obey Szybalski's transcription direction rule and politely purine-load RNAs with both adenine and guanineQ24624834
Analysis of Nanoarchaeum equitans genome and proteome composition: indications for hyperthermophilic and parasitic adaptationQ24672111
Rapid asymmetric evolution of a dual-coding tumor suppressor INK4a/ARF locus contradicts its functionQ24682671
Experimental evidence for the thermophilicity of ancestral lifeQ27678677
Relationships between genomic G+C content, RNA secondary structures, and optimal growth temperature in prokaryotesQ28239616
On the correlation between genomic G+C content and optimal growth temperature in prokaryotes: data quality and confounding factorsQ31032969
Environment specific substitution tables for thermophilic proteinsQ33281933
Birth and death of gene overlaps in vertebrates.Q33302860
Avoiding dangerous missense: thermophiles display especially low mutation ratesQ33471395
PairWise Neighbours database: overlaps and spacers among prokaryote genomes.Q33474544
IS1414, an Escherichia coli insertion sequence with a heat-stable enterotoxin gene embedded in a transposase-like geneQ33591956
Reduction in structural disorder and functional complexity in the thermal adaptation of prokaryotesQ33658850
Comparative study of overlapping genes in the genomes of Mycoplasma genitalium and Mycoplasma pneumoniaeQ33856721
A high frequency of overlapping gene expression in compacted eukaryotic genomesQ33911415
Sequence conservation and functional constraint on intergenic spacers in reduced genomes of the obligate symbiont BuchneraQ34017517
The universal ancestor was a thermophile or a hyperthermophile: tests and further evidenceQ34184184
Temperature adaptation at homologous sites in proteins from nine thermophile-mesophile species pairsQ34382684
Genome-wide patterns of nucleotide substitution reveal stringent functional constraints on the protein sequences of thermophilesQ34645289
Viral proteins originated de novo by overprinting can be identified by codon usage: application to the "gene nursery" of DeltaretrovirusesQ34961642
Parallel evolution of transcriptome architecture during genome reorganizationQ35493875
P433issue2
P921main subjectprokaryotesQ19081
P304page(s)345-353
P577publication date2014-12-13
P1433published inExtremophilesQ15766992
P1476titleOverlapping genes: a new strategy of thermophilic stress tolerance in prokaryotes
P478volume19

Reverse relations

cites work (P2860)
Q47114728Computational design of fully overlapping coding schemes for protein pairs and triplets
Q37393076Overlapping Regions in HIV-1 Genome Act as Potential Sites for Host-Virus Interaction
Q36830924Temperature effects on virion volume and genome length in dsDNA viruses.

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