Genetic variation and recombination of RdRp and HSP 70h genes of Citrus tristeza virus isolates from orange trees showing symptoms of citrus sudden death disease.

scientific article published on 16 January 2008

Genetic variation and recombination of RdRp and HSP 70h genes of Citrus tristeza virus isolates from orange trees showing symptoms of citrus sudden death disease. is …
instance of (P31):
scholarly articleQ13442814

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P6179Dimensions Publication ID1004397172
P356DOI10.1186/1743-422X-5-9
P932PMC publication ID2244595
P698PubMed publication ID18199320

P50authorClarissa P C GomesQ80501875
P2093author name stringDarren P Martin
Tatsuya Nagata
Georgios J Pappas
Carlos R Borges Neto
Waldir C de Jesus
P2860cites workCLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choiceQ24286950
Spatial and temporal analyses of citrus sudden death as a tool to generate hypotheses concerning its etiology.Q51124326
RDP2: recombination detection and analysis from sequence alignments.Q51989136
A Modified Bootscan Algorithm for Automated Identification of Recombinant Sequences and Recombination BreakpointsQ56878359
Possible emergence of new geminiviruses by frequent recombinationQ73278372
MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignmentQ27860726
DnaSP, DNA polymorphism analyses by the coalescent and other methodsQ27860965
A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum LikelihoodQ27861000
Analyzing the mosaic structure of genesQ29616749
Identification and genomic characterization of a new virus (Tymoviridae family) associated with citrus sudden death diseaseQ33211868
Persistent infection and promiscuous recombination of multiple genotypes of an RNA virus within a single host generate extensive diversityQ33299487
Sister-scanning: a Monte Carlo procedure for assessing signals in recombinant sequencesQ33389642
Evaluation of methods for detecting recombination from DNA sequences: computer simulationsQ33950030
Cell-to-cell movement and assembly of a plant closterovirus: roles for the capsid proteins and Hsp70 homologQ34085336
Progress on strain differentiation of Citrus tristeza virus and its application to the epidemiology of citrus tristeza diseaseQ34117631
An exact nonparametric method for inferring mosaic structure in sequence tripletsQ35846218
Genetic variation of Citrus tristeza virus isolates from California and Spain: evidence for mixed infections and recombinationQ39606780
A new DNA sequence assembly programQ40397097
Complete sequence of the citrus tristeza virus RNA genomeQ42684039
Closterovirus encoded HSP70 homolog and p61 in addition to both coat proteins function in efficient virion assemblyQ44164483
The haplotype distribution of two genes of citrus tristeza virus is altered after host change or aphid transmission.Q44649831
Molecular variability of the 5'- and 3'-terminal regions of citrus tristeza virus RNA.Q45389224
Evolutionary analysis of genetic variation observed in citrus tristeza virus (CTV) after host passage.Q45421927
Assessment of sequence diversity in the 5'-terminal region of Citrus tristeza virus from IndiaQ45446151
Population structure and genetic diversity within California Citrus tristeza virus (CTV) isolatesQ45739236
A statistical test for detecting geographic subdivisionQ46747673
RDP: detection of recombination amongst aligned sequencesQ46776083
The effect of recombination on the accuracy of phylogeny estimationQ47584013
P275copyright licenseCreative Commons Attribution 2.0 GenericQ19125117
P6216copyright statuscopyrightedQ50423863
P921main subjectCitrusQ81513
genetic variationQ349856
P304page(s)9
P577publication date2008-01-16
P1433published inVirology JournalQ7934868
P1476titleGenetic variation and recombination of RdRp and HSP 70h genes of Citrus tristeza virus isolates from orange trees showing symptoms of citrus sudden death disease
P478volume5

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cites work (P2860)
Q33613558Deep Sequencing Analysis of RNAs from Citrus Plants Grown in a Citrus Sudden Death-Affected Area Reveals Diverse Known and Putative Novel Viruses.
Q37539300Genetic Structure and Molecular Variability Analysis of Citrus sudden death-associated virus Isolates from Infected Plants Grown in Brazil
Q42287855Genetic variability and evolutionary dynamics of viruses of the family Closteroviridae.
Q46152285Nuclear magnetic resonance characterization of metabolite disorder in orange trees caused by citrus sudden death disease
Q35895349Phylogenetic Studies of the Three RNA Silencing Suppressor Genes of South American CTV Isolates Reveal the Circulation of a Novel Genetic Lineage

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