Deazaguanine derivatives, examples of crosstalk between RNA and DNA modification pathways.

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Deazaguanine derivatives, examples of crosstalk between RNA and DNA modification pathways. is …
instance of (P31):
review articleQ7318358
scholarly articleQ13442814

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P356DOI10.1080/15476286.2016.1265200
P932PMC publication ID5699537
P698PubMed publication ID27937735

P50authorValérie de Crécy-LagardQ84288090
Manal A SwarjoQ88940235
P2093author name stringGeoffrey Hutinet
P2860cites workN6-methyladenosine in nuclear RNA is a major substrate of the obesity-associated FTOQ24293481
ALKBH8-mediated formation of a novel diastereomeric pair of wobble nucleosides in mammalian tRNAQ24338915
From cyclohydrolase to oxidoreductase: discovery of nitrile reductase activity in a common foldQ24555756
Queuosine modification of the wobble base in tRNAHis influences 'in vivo' decoding propertiesQ24555808
Genome annotation and intraviral interactome for the Streptococcus pneumoniae virulent phage Dp-1Q24600699
Discovery and characterization of an amidinotransferase involved in the modification of archaeal tRNAQ24633984
Zinc plays a key role in human and bacterial GTP cyclohydrolase IQ27628605
Crystal structure of archaeosine tRNA-guanine transglycosylaseQ27639126
Alternative Tertiary Structure of tRNA for Recognition by a Posttranscriptional Modification EnzymeQ27641144
Crystal structure of QueC from Bacillus subtilis: an enzyme involved in preQ1 biosynthesisQ27650644
An integrative approach combining noncovalent mass spectrometry, enzyme kinetics and X-ray crystallography to decipher Tgt protein-protein and protein-RNA interactionQ27656669
Zinc-Independent Folate Biosynthesis: Genetic, Biochemical, and Structural Investigations Reveal New Metal Dependence for GTP Cyclohydrolase IBQ27657481
High-Resolution Structure of the Nitrile Reductase QueF Combined with Molecular Simulations Provide Insight into Enzyme MechanismQ27664686
Structural Basis of Biological Nitrile ReductionQ27670708
Investigation of Specificity Determinants in Bacterial tRNA-Guanine Transglycosylase Reveals Queuine, the Substrate of Its Eucaryotic Counterpart, as InhibitorQ27678289
Radical SAM enzyme QueE defines a new minimal core fold and metal-dependent mechanismQ27681041
Biochemical and Structural Studies of 6-Carboxy-5,6,7,8-tetrahydropterin Synthase Reveal the Molecular Basis of Catalytic Promiscuity within the Tunnel-fold SuperfamilyQ27684533
Crystal structure of tRNA-guanine transglycosylase: RNA modification by base exchangeQ27732798
Mutagenesis and crystallographic studies of Zymomonas mobilis tRNA-guanine transglycosylase reveal aspartate 102 as the active site nucleophileQ27734193
Messenger RNA modifications: Form, distribution, and functionQ28074540
The dynamic N(1)-methyladenosine methylome in eukaryotic messenger RNAQ28116053
Identification of four genes necessary for biosynthesis of the modified nucleoside queuosineQ28189890
Origins of highly mosaic mycobacteriophage genomesQ28198119
Queuosine deficiency in eukaryotes compromises tyrosine production through increased tetrahydrobiopterin oxidationQ28235401
Queuosine formation in eukaryotic tRNA occurs via a mitochondria-localized heteromeric transglycosylaseQ28594211
Identification and characterization of novel Salmonella mobile elements involved in the dissemination of genes linked to virulence and transmissionQ28728986
Mg2+ binding and archaeosine modification stabilize the G15 C48 Levitt base pair in tRNAsQ29048148
Biosynthesis of pyrrolopyrimidinesQ33616474
Specificity shifts in the rRNA and tRNA nucleotide targets of archaeal and bacterial m5U methyltransferases.Q33738594
Towards a systems approach in the genetic analysis of archaea: Accelerating mutant construction and phenotypic analysis in Haloferax volcaniiQ33793214
Modified bases in bacteriophage DNAsQ34056745
Plant, animal, and fungal micronutrient queuosine is salvaged by members of the DUF2419 protein familyQ34061163
Biosynthesis of archaeosine, a novel derivative of 7-deazaguanosine specific to archaeal tRNA, proceeds via a pathway involving base replacement on the tRNA polynucleotide chainQ34064981
Novel mechanism of post-transcriptional modification of tRNA. Insertion of bases of Q precursors into tRNA by a specific tRNA transglycosylase reactionQ34188506
Kinetic Mechanism of the tRNA-Modifying Enzyme S-Adenosylmethionine:tRNA Ribosyltransferase-Isomerase (QueA)Q34194898
Diversity of archaeosine synthesis in crenarchaeotaQ34227918
Queuosine biosynthesis is required for sinorhizobium meliloti-induced cytoskeletal modifications on HeLa Cells and symbiosis with Medicago truncatulaQ34586583
A nutrient-driven tRNA modification alters translational fidelity and genome-wide protein coding across an animal genusQ34662812
Genomic sequencing and biological characteristics of a novel Escherichia coli bacteriophage 9g, a putative representative of a new Siphoviridae genusQ34774812
Computational identification of novel biochemical systems involved in oxidation, glycosylation and other complex modifications of bases in DNA.Q34787593
A novel class of modular transporters for vitamins in prokaryotes.Q34860011
Discovery of epoxyqueuosine (oQ) reductase reveals parallels between halorespiration and tRNA modificationQ34937455
Escherichia coli QueD is a 6-carboxy-5,6,7,8-tetrahydropterin synthaseQ34949346
The deazapurine biosynthetic pathway revealed: in vitro enzymatic synthesis of PreQ(0) from guanosine 5'-triphosphate in four stepsQ34974758
Transcriptome-wide mapping of pseudouridines: pseudouridine synthases modify specific mRNAs in S. cerevisiaeQ35374452
The queuine micronutrient: charting a course from microbe to man.Q35586012
Functional promiscuity of the COG0720 familyQ35685500
An adenosine-to-inosine tRNA-editing enzyme that can perform C-to-U deamination of DNA.Q35808735
Regulation of DNA phosphorothioate modification in Salmonella enterica by DndB.Q35865501
Site-specific modification of Shigella flexneri virF mRNA by tRNA-guanine transglycosylase in vitroQ35945409
The AlkB Family of Fe(II)/α-Ketoglutarate-dependent Dioxygenases: Repairing Nucleic Acid Alkylation Damage and BeyondQ35978195
Mechanism and substrate specificity of tRNA-guanine transglycosylases (TGTs): tRNA-modifying enzymes from the three different kingdoms of life share a common catalytic mechanism.Q36277356
Radical-mediated ring contraction in the biosynthesis of 7-deazapurinesQ36578587
Effects of tRNA modification on translational accuracy depend on intrinsic codon-anticodon strengthQ36627949
Novel genomic island modifies DNA with 7-deazaguanine derivativesQ36710523
Biosynthesis of 7-deazaguanosine-modified tRNA nucleosides: a new role for GTP cyclohydrolase IQ36994365
Deciphering deazapurine biosynthesis: pathway for pyrrolopyrimidine nucleosides toyocamycin and sangivamycinQ37016115
Functional Annotations of Paralogs: A Blessing and a CurseQ37293854
Identification of Streptococcus thermophilus CNRZ368 genes involved in defense against superoxide stressQ37318008
Studies of translational misreading in vivo show that the ribosome very efficiently discriminates against most potential errorsQ37400285
Queuosine modification of tRNA: its divergent role in cellular machineryQ37635276
The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST).Q37661996
Structure and function of mammalian DNA methyltransferases.Q37829700
The Escherichia coli tRNA-guanine transglycosylase can recognize and modify DNA.Q38293680
Wybutosine biosynthesis: structural and mechanistic overviewQ38335461
A Single Enzyme Transforms a Carboxylic Acid into a Nitrile through an Amide IntermediateQ38627537
Multisite-specific archaeosine tRNA-guanine transglycosylase (ArcTGT) from Thermoplasma acidophilum, a thermo-acidophilic archaeonQ38667780
Mechanism and biological role of Dnmt2 in Nucleic Acid Methylation.Q38845904
The APOBEC Protein Family: United by Structure, Divergent in FunctionQ38860803
Biosynthesis and Function of Modified Bases in Bacteria and Their VirusesQ38869789
New function of vitamin B12: cobamide-dependent reduction of epoxyqueuosine to queuosine in tRNAs of Escherichia coli and Salmonella typhimuriumQ39953065
Endonuclease (R) subunits of type-I and type-III restriction-modification enzymes contain a helicase-like domainQ41131058
Dynamic modulation of Dnmt2-dependent tRNA methylation by the micronutrient queuineQ41830843
Complete Genome Sequences of Four Novel Escherichia coli Bacteriophages Belonging to New Phage GroupsQ42028944
Crystal structure of the archaeosine synthase QueF-like-Insights into amidino transfer and tRNA recognition by the tunnel fold.Q45964968
Mechanistic studies of Bacillus subtilis QueF, the nitrile oxidoreductase involved in queuosine biosynthesisQ46955515
Phosphorothioation of DNA in bacteria by dnd genes.Q54432882
Sequence and structural features of the T-fold, an original tunnelling building unitQ57752885
Isolation and characterization of an Escherichia coli mutant lacking tRNA-guanine transglycosylase. Function and biosynthesis of queuosine in tRNAQ71601854
Structure of the archaeal transfer RNA nucleoside G*-15 (2-amino-4,7-dihydro- 4-oxo-7-beta-D-ribofuranosyl-1H-pyrrolo[2,3-d]pyrimidine-5-carboximi dam ide (archaeosine))Q72079353
Effects of a diet deficient in tyrosine and queuine on germfree miceQ73031298
Transfer RNA modification, temperature and DNA superhelicity have a common target in the regulatory network of the virulence of Shigella flexneri: the expression of the virF geneQ73486827
PreQ0 base, an unusual metabolite with anti-cancer activity from Streptomyces qinglanensis 172205Q85888785
P275copyright licenseCreative Commons Attribution-NonCommercial-NoDerivs 4.0 InternationalQ24082749
P433issue9
P921main subjectDNAQ7430
P304page(s)1175-1184
P577publication date2016-12-12
P1433published inRNA BiologyQ7277167
P1476titleDeazaguanine derivatives, examples of crosstalk between RNA and DNA modification pathways
P478volume14

Reverse relations

cites work (P2860)
Q915584117-Deazaguanine modifications protect phage DNA from host restriction systems
Q58117643Bacteriophage vB_PagS_Vid5: A Low-Temperature Siphovirus That Harbors a Cluster of Genes Involved in the Biosynthesis of Archaeosine
Q61805350Complete Genome Sequence of Escherichia coli Siphophage BRET
Q93086348Discovery of novel bacterial queuine salvage enzymes and pathways in human pathogens
Q47121089Editorial: RNA modifications - what to read first?
Q48304481Identification of a Novel Epoxyqueuosine Reductase Family by Comparative Genomics
Q64097394Mycobacteriophage CRB2 defines a new subcluster in mycobacteriophage classification
Q58550160Superior cellular activities of azido- over amino-functionalized ligands for engineered preQ riboswitches in E.coli
Q37729417The Escherichia coli COG1738 Member YhhQ Is Involved in 7-Cyanodeazaguanine (preQ₀) Transport
Q64110756Transcriptional activation by MafR, a global regulator of Enterococcus faecalis
Q57808741Transfer RNA Modification Enzymes from Thermophiles and Their Modified Nucleosides in tRNA

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