Big data management challenges in health research-a literature review.

scientific article published on 7 August 2017

Big data management challenges in health research-a literature review. is …
instance of (P31):
scholarly articleQ13442814

External links are
P8978DBLP publication IDjournals/bib/WangWLC19
P356DOI10.1093/BIB/BBX086
P932PMC publication ID6488939
P698PubMed publication ID28968677

P2093author name stringXiaoming Wang
Carolyn Williams
Zhen Hua Liu
Joe Croghan
P2860cites workBig data: teaching must evolve to keep up with advancesQ59065944
Text-mining and information-retrieval services for molecular biologyQ21184158
Genetic studies of body mass index yield new insights for obesity biologyQ22305005
A systematic review of barriers to data sharing in public healthQ24549717
The 2010 Nucleic Acids Research Database Issue and online Database Collection: a community of data resourcesQ24642881
big data: The future of biocurationQ24650969
The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information RepositoryQ26253943
Big Data Application in Biomedical Research and Health Care: A Literature ReviewQ26769605
The FAIR Guiding Principles for scientific data management and stewardshipQ27942822
Supporting the curation of biological databases with reusable text miningQ28257005
Probabilistic machine learning and artificial intelligenceQ28262482
Data curation + process curation=data integration + scienceQ28303099
Pivoting approaches for bulk extraction of Entity-Attribute-Value dataQ28303422
Translational integrity and continuity: personalized biomedical data integrationQ28388444
A Dimensional Bus model for integrating clinical and research dataQ28394891
Making sense of big data in health research: Towards an EU action planQ28597362
Automated methods for the summarization of electronic health recordsQ28597789
Exploring performance issues for a clinical database organized using an entity-attribute-value representationQ39422347
A Practical Guide to The Cancer Genome Atlas (TCGA).Q39894314
Computers read the fossil recordQ40775406
Preserving an integrated view of informatics.Q42408157
Precision medicine informaticsQ42507839
Sharing Clinical Trial Data--A Proposal from the International Committee of Medical Journal EditorsQ42672446
Don't forget people and specimens that make the databaseQ48072851
TensorFlow: Biology's Gateway to Deep Learning?Q50516290
Assisted curation: does text mining really help?Q51895917
The entity-relationship model---toward a unified view of dataQ54151498
Data science and predictionQ55919439
Principles of transaction-oriented database recoveryQ55921859
SQL databases v. NoSQL databasesQ56569753
The Functional Genomics Experiment model (FuGE): an extensible framework for standards in functional genomicsQ56889083
Big data analytics in healthcare: promise and potentialQ28649383
A machine reading system for assembling synthetic paleontological databasesQ28650786
Translational research platforms integrating clinical and omics data: a review of publicly available solutionsQ28652234
Towards a data sharing culture: recommendations for leadership from academic health centersQ28757253
Genome-wide trans-ancestry meta-analysis provides insight into the genetic architecture of type 2 diabetes susceptibilityQ29417007
Research electronic data capture (REDCap)--a metadata-driven methodology and workflow process for providing translational research informatics supportQ29547407
The genetic architecture of type 2 diabetesQ29583824
The minimum information about a proteomics experiment (MIAPE)Q29615391
A new initiative on precision medicineQ29615654
Genetic screens in human cells using the CRISPR-Cas9 systemQ29617411
Inverted files for text search enginesQ30054512
Indicators for the Data Usage Index (DUI): an incentive for publishing primary biodiversity data through global information infrastructureQ30282040
What is biomedical informatics?Q30379894
ImmPort: disseminating data to the public for the future of immunologyQ30813520
High dimensional biological data retrieval optimization with NoSQL technologyQ30872534
Efficient Execution Methods of Pivoting for Bulk Extraction of Entity-Attribute-Value-Modeled DataQ30885429
How (not) to protect genomic data privacy in a distributed network: using trail re-identification to evaluate and design anonymity protection systemsQ30938588
From big data analysis to personalized medicine for all: challenges and opportunitiesQ30976798
Privacy protection for clinical and genomic data. The use of privacy-enhancing techniques in medicineQ30982141
Big Data Clinical Research: Validity, Ethics, and Regulation.Q30986372
MLBCD: a machine learning tool for big clinical dataQ30998933
caCORE: a common infrastructure for cancer informaticsQ31032181
Integrative methods for analyzing big data in precision medicineQ31032576
Analysis of metabolomic data: tools, current strategies and future challenges for omics data integrationQ31076586
The Common Data Elements for cancer research: remarks on functions and structure.Q31082863
Mindtagger: A Demonstration of Data Labeling in Knowledge Base ConstructionQ31090225
PredicT-ML: a tool for automating machine learning model building with big clinical dataQ31106742
GENOMICS. A federated ecosystem for sharing genomic, clinical dataQ31107067
Improving the value of clinical research through the use of Common Data ElementsQ31108589
Genome, transcriptome and proteome: the rise of omics data and their integration in biomedical sciencesQ31144431
Data extraction and ad hoc query of an entity-attribute-value databaseQ31970070
A relational model of data for large shared data banksQ32061744
Common data element (CDE) management and deployment in clinical trials.Q33196883
The Enterprise Data Trust at Mayo Clinic: a semantically integrated warehouse of biomedical dataQ33535114
Extraction of standardized archetyped data from Electronic Health Record systems based on the Entity-Attribute-Value ModelQ33600693
STRIDE--An integrated standards-based translational research informatics platformQ33626790
The National Institutes of Health's Biomedical Translational Research Information System (BTRIS): design, contents, functionality and experience to dateQ33632571
Serving the enterprise and beyond with informatics for integrating biology and the bedside (i2b2).Q34399891
Defining the role of common variation in the genomic and biological architecture of adult human heightQ34441746
Text summarization in the biomedical domain: a systematic review of recent researchQ34663938
NCBI's Database of Genotypes and Phenotypes: dbGaP.Q35057773
The Cancer Genome Atlas (TCGA): an immeasurable source of knowledgeQ35066321
New genetic loci link adipose and insulin biology to body fat distributionQ35114362
Enabling flexible integration of healthcare information using the entity-attribute-value storage modelQ35122436
ChIP-chip: considerations for the design, analysis, and application of genome-wide chromatin immunoprecipitation experimentsQ35676599
National Database for Autism Research (NDAR): Big Data Opportunities for Health Services Research and Health Technology Assessment.Q35800876
BigQ: a NoSQL based framework to handle genomic variants in i2b2.Q35881016
Towards an Oncology Database (ONCOD) Using a Warehousing Approach.Q36082936
Data Sharing - Is the Juice Worth the Squeeze?Q36175174
Finding useful data across multiple biomedical data repositories using DataMed.Q36382190
Incremental Knowledge Base Construction Using DeepDiveQ36854866
The genetic regulatory signature of type 2 diabetes in human skeletal muscleQ37060991
The genetics of blood pressure regulation and its target organs from association studies in 342,415 individualsQ37297746
Trans-ancestry meta-analyses identify rare and common variants associated with blood pressure and hypertensionQ37324554
Facts from text: can text mining help to scale-up high-quality manual curation of gene products with ontologies?Q37342472
Sharing and reporting the results of clinical trialsQ37403368
DeepDive: Declarative Knowledge Base ConstructionQ37714815
Million Veteran Program: A mega-biobank to study genetic influences on health and diseaseQ38386184
Machine learning: Trends, perspectives, and prospectsQ38549184
Using Electronic Health Records for Population Health Research: A Review of Methods and Applications.Q38669361
Proteogenomics: Key Driver for Clinical Discovery and Personalized MedicineQ38743141
Comparison of Breast Cancer Molecular Features and Survival by African and European Ancestry in The Cancer Genome AtlasQ38804228
Functional genetic screens for enhancer elements in the human genome using CRISPR-Cas9.Q38805040
Automatically explaining machine learning prediction results: a demonstration on type 2 diabetes risk predictionQ38836207
Problems, challenges and promises: perspectives on precision medicine.Q38976902
P433issue1
P921main subjectbig dataQ858810
data managementQ1149776
research data managementQ30089794
P304page(s)156-167
P577publication date2017-08-07
P1433published inBriefings in BioinformaticsQ4967031
P1476titleBig data management challenges in health research-a literature review
P478volume20

Reverse relations

cites work (P2860)
Q97422216A review of big data and medical research
Q89561192A semi-automated pipeline for fulfillment of resource requests from a longitudinal Alzheimer's disease registry
Q60923048Adapting data management education to support clinical research projects in an academic medical center
Q90415776Artificial intelligence with multi-functional machine learning platform development for better healthcare and precision medicine
Q103004911Guidelines for Data Acquisition, Quality and Curation for Observational Research Designs (DAQCORD)
Q92956133MAV-clic: management, analysis, and visualization of clinical data
Q62730213Twenty years of bioinformatics research for protease-specific substrate and cleavage site prediction: a comprehensive revisit and benchmarking of existing methods
Q98564898Understanding the complexities of digital dentistry integration in high-volume dental institutions

Search more.