Programming biological operating systems: genome design, assembly and activation

scientific article published in May 2014

Programming biological operating systems: genome design, assembly and activation is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1038/NMETH.2894
P698PubMed publication ID24781325

P2093author name stringDaniel G Gibson
P2860cites workThe Minimal Gene Complement of Mycoplasma genitaliumQ22065573
One-step assembly in yeast of 25 overlapping DNA fragments to form a complete synthetic Mycoplasma genitalium genomeQ22066288
Ubiquity of Biological Ice Nucleators in SnowfallQ22242277
Generating a synthetic genome by whole genome assembly: phiX174 bacteriophage from synthetic oligonucleotidesQ24618245
A whole-cell computational model predicts phenotype from genotypeQ24622101
Towards synthesis of a minimal cellQ24672349
Refactoring bacteriophage T7Q24672460
Enzymatic assembly of DNA molecules up to several hundred kilobasesQ28241142
Precise manipulation of chromosomes in vivo enables genome-wide codon replacementQ28243372
Programming cells by multiplex genome engineering and accelerated evolutionQ28253066
Complete chemical synthesis, assembly, and cloning of a Mycoplasma genitalium genomeQ28265807
Separation of yeast chromosome-sized DNAs by pulsed field gradient gel electrophoresisQ28267117
A fully decompressed synthetic bacteriophage øX174 genome assembled and archived in yeastQ28277443
Creation of a bacterial cell controlled by a chemically synthesized genomeQ28283016
ZFN, TALEN, and CRISPR/Cas-based methods for genome engineeringQ29615505
Initiation of translation in prokaryotes and eukaryotesQ29618237
Synthetic generation of influenza vaccine viruses for rapid response to pandemicsQ30430578
Direct transfer of whole genomes from bacteria to yeastQ33668186
Eukaryotic transcriptional controlQ33803995
Cloning whole bacterial genomes in yeastQ33812409
High efficiency mutagenesis, repair, and engineering of chromosomal DNA using single-stranded oligonucleotidesQ33948878
Nuclear transfer to eggs and oocytesQ34026825
Combining two genomes in one cell: stable cloning of the Synechocystis PCC6803 genome in the Bacillus subtilis 168 genomeQ34115824
Update on designing and building minimal cellsQ34126515
Enzymatic assembly of overlapping DNA fragmentsQ34186536
Genome engineeringQ34614856
Genome transplantation in bacteria: changing one species to anotherQ34643428
The first half-century of nuclear transplantationQ35167059
Refactoring the nitrogen fixation gene cluster from Klebsiella oxytocaQ35935807
DNA synthesis, assembly and applications in synthetic biologyQ36179505
Sequence analysis of a complete 1.66 Mb Prochlorococcus marinus MED4 genome cloned in yeastQ36368852
Synthetic biology projects in vitroQ36675907
Rapid, modular and reliable construction of complex mammalian gene circuitsQ37148538
Synthetic chromosome arms function in yeast and generate phenotypic diversity by designQ37176292
DNA assembly for synthetic biology: from parts to pathways and beyond.Q37829924
Computational tools for the synthetic design of biochemical pathwaysQ37977830
Constructing large DNA segments by iterative clone recombinationQ38647318
Transfer of YACs up to 2.3 Mb intact into human cells with polyethylenimineQ40928405
Synthesis of DNA fragments in yeast by one-step assembly of overlapping oligonucleotidesQ42148059
An exogenous chloroplast genome for complex sequence manipulation in algaeQ42562712
An origin-deficient yeast artificial chromosome triggers a cell cycle checkpointQ43597288
Oligonucleotide assembly in yeast to produce synthetic DNA fragmentsQ44260295
Gene and genome construction in yeastQ46085150
Cloning the Acholeplasma laidlawii PG-8A genome in Saccharomyces cerevisiae as a yeast centromeric plasmid.Q51014022
Chemical synthesis of the mouse mitochondrial genome.Q54407443
Plasmid construction by homologous recombination in yeast.Q54771077
Selective isolation of genomic loci from complex genomes by transformation-associated recombination cloning in the yeast Saccharomyces cerevisiaeQ80829937
Creating bacterial strains from genomes that have been cloned and engineered in yeastQ84441441
Assembly of large, high G+C bacterial DNA fragments in yeastQ86731238
P433issue5
P304page(s)521-526
P577publication date2014-05-01
P1433published inNature MethodsQ680640
P1476titleProgramming biological operating systems: genome design, assembly and activation
P478volume11

Reverse relations

cites work (P2860)
Q26828848A review of metabolic and enzymatic engineering strategies for designing and optimizing performance of microbial cell factories
Q38831258ACEMBL Tool-Kits for High-Throughput Multigene Delivery and Expression in Prokaryotic and Eukaryotic Hosts.
Q35892238An innovative platform for quick and flexible joining of assorted DNA fragments.
Q35641174An overhang-based DNA block shuffling method for creating a customized random library
Q35830879Artificially designed pathogens - a diagnostic option for future military deployments
Q41380617Assessing glycolytic flux alterations resulting from genetic perturbations in E. coli using a biosensor
Q36692751Codon Bias as a Means to Fine-Tune Gene Expression
Q46269319Detailed transcriptome analysis of the plant growth promoting Paenibacillus riograndensis SBR5 by using RNA-seq technology
Q47104259Exponential propagation of large circular DNA by reconstitution of a chromosome-replication cycle.
Q93052007Genome-driven cell engineering review: in vivo and in silico metabolic and genome engineering
Q38728295High molecular weight DNA assembly in vivo for synthetic biology applications
Q34417984Large-scale de novo DNA synthesis: technologies and applications
Q46455637Magnesium aminoclay-based transformation of Paenibacillus riograndensis and Paenibacillus polymyxa and development of tools for gene expression
Q39010533Next generation of network medicine: interdisciplinary signaling approaches
Q36590659Reinvigorating natural product combinatorial biosynthesis with synthetic biology
Q27021207Rewriting the blueprint of life by synthetic genomics and genome engineering
Q38321952Strategies for cloning and manipulating natural and synthetic chromosomes
Q36098396Synthetic Biology of Natural Products
Q89146024Synthetic biology advances and applications in the biotechnology industry: a perspective
Q38368454Synthetic biology advances for pharmaceutical production
Q39156083Total synthesis of a eukaryotic chromosome: Redesigning and SCRaMbLE-ing yeast.
Q38817999Transformation-associated recombination (TAR) cloning for genomics studies and synthetic biology
Q45935586UP Finder: A COBRA toolbox extension for identifying gene overexpression strategies for targeted overproduction.
Q28278149Vibrio natriegens as a fast-growing host for molecular biology

Search more.