| Q56883166 | A Review of Arthropod Phylogeny: New Data Based on Ribosomal DNA Sequences and Direct Character Optimization |
| Q21283768 | A close phylogenetic relationship between Sipuncula and Annelida evidenced from the complete mitochondrial genome sequence of Phascolosoma esculenta |
| Q55315093 | A complete logical approach to resolve the evolution and dynamics of mitochondrial genome in bilaterians. |
| Q45905055 | A comprehensive analysis of bilaterian mitochondrial genomes and phylogeny. |
| Q38645061 | A flexible genetic toolkit for arthropod neurogenesis |
| Q34075090 | A hemocyanin from the Onychophora and the emergence of respiratory proteins. |
| Q34093967 | A method for computing an inventory of metazoan mitochondrial gene order rearrangements |
| Q33214611 | Advances in phylogeny reconstruction from gene order and content data |
| Q28765948 | Analysis of the complete mitochondrial DNA sequence of the brachiopod terebratulina retusa places Brachiopoda within the protostomes |
| Q33594295 | Animal evolution. The end of the intermediate taxa? |
| Q29547362 | Animal mitochondrial genomes |
| Q92786363 | Arm-less mitochondrial tRNAs conserved for over 30 millions of years in spiders |
| Q58337495 | Arthropod Cladistics: Combined Analysis of Histone H3 and U2 snRNA Sequences and Morphology |
| Q33778360 | Asymmetric substitution patterns: a review of possible underlying mutational or selective mechanisms |
| Q37037867 | Beyond linear sequence comparisons: the use of genome-level characters for phylogenetic reconstruction |
| Q47730461 | Big trees from little genomes: mitochondrial gene order as a phylogenetic tool |
| Q38047777 | Bioinformatics methods for the comparative analysis of metazoan mitochondrial genome sequences. |
| Q34790843 | Changing identities: tRNA duplication and remolding within animal mitochondrial genomes |
| Q36102656 | Characteristics of the nuclear (18S, 5.8S, 28S and 5S) and mitochondrial (12S and 16S) rRNA genes of Apis mellifera (Insecta: Hymenoptera): structure, organization, and retrotransposable elements |
| Q64116291 | Characterization of the mitochondrial genome of an ancient amphipod Halice sp. MT-2017 (Pardaliscidae) from 10,908 m in the Mariana Trench |
| Q52136184 | Chelicerate Hox genes and the homology of arthropod segments. |
| Q28776339 | Cloning and functional expression of a cDNA encoding a pheromone gland-specific acyl-CoA Delta11-desaturase of the cabbage looper moth, Trichoplusia ni |
| Q33882264 | Complete DNA sequence of the mitochondrial genome of the ascidian Halocynthia roretzi (Chordata, Urochordata). |
| Q51726429 | Complete mitochondrial DNA sequence of the endangered frog Odorrana ishikawae (family Ranidae) and unexpected diversity of mt gene arrangements in ranids. |
| Q56927744 | Complete mitochondrial genome of the Antarctic amphipod Gondogeneia antarctica (Crustacea, amphipod) |
| Q42255127 | Complete mitochondrial genomes from two species of Chinese freshwater crabs of the genus Sinopotamon recovered using next-generation sequencing reveal a novel gene order (Brachyura, Potamidae). |
| Q41331983 | Complete mitochondrial genomes of Anopheles stephensi and An. dirus and comparative evolutionary mitochondriomics of 50 mosquitoes |
| Q39940632 | Complete mitochondrial genomes of two gelechioids, Mesophleps albilinella and Dichomeris ustalella (Lepidoptera: Gelechiidae), with a description of gene rearrangement in Lepidoptera |
| Q44956867 | Complete mitochondrial genomes of two green lacewings, Chrysoperla nipponensis (Okamoto, 1914) and Apochrysa matsumurae Okamoto, 1912 (Neuroptera: Chrysopidae) |
| Q21034129 | Complete mtDNA genomes of Anopheles darlingi and an approach to anopheline divergence time |
| Q42679112 | Complete nucleotide sequence of the mitochondrial genome of a Malagasy poison frog Mantella madagascariensis: evolutionary implications on mitochondrial genomes of higher anuran groups |
| Q24548080 | Complete sequence of the amphioxus (Branchiostoma lanceolatum) mitochondrial genome: relations to vertebrates |
| Q28769446 | Complete sequence of the mitochondrial DNA of the annelid worm Lumbricus terrestris |
| Q42619304 | Complete sequence of the mitochondrial DNA of the primitive opisthobranch gastropod Pupa strigosa: systematic implication of the genome organization |
| Q42503348 | Complete sequence of the mitochondrial genome of the tapeworm Hymenolepis diminuta: gene arrangements indicate that Platyhelminths are Eutrochozoans |
| Q77724522 | Counting on comparative maps |
| Q33255505 | Data mining for proteins characteristic of clades |
| Q60075392 | Demise of the Atelocerata? |
| Q54780993 | Development, characterisation, inheritance, and cross-species utility of American lobster (Homarus americanus) microsatellite and mtDNA PCR-RFLP markers. |
| Q47183355 | Distance-based genome rearrangement phylogeny |
| Q37050816 | Duplication and Remolding of tRNA Genes in the Mitochondrial Genome of Reduvius tenebrosus (Hemiptera: Reduviidae). |
| Q33302473 | EST sequencing of Onychophora and phylogenomic analysis of Metazoa |
| Q52138299 | Embryonic expression patterns of the Hox genes of the crayfish Procambarus clarkii (Crustacea, Decapoda). |
| Q29547800 | Evidence for a clade of nematodes, arthropods and other moulting animals |
| Q24671542 | Evidence that plant-like genes in Chlamydia species reflect an ancestral relationship between Chlamydiaceae, cyanobacteria, and the chloroplast |
| Q28710147 | Evolution and phylogeny of the mud shrimps (Crustacea: Decapoda) revealed from complete mitochondrial genomes |
| Q38556679 | Evolution of the entire arthropod Hox gene set predated the origin and radiation of the onychophoran/arthropod clade |
| Q89737532 | Exceptional Enlargement of the Mitochondrial Genome Results from Distinct Causes in Different Rain Frogs (Anura: Brevicipitidae: Breviceps) |
| Q47683002 | Extensive gene order rearrangement in the mitochondrial genome of the centipede Scutigera coleoptrata |
| Q36474872 | Extent of genomic rearrangement after genome duplication in yeast |
| Q29618261 | Fossils, genes and the evolution of animal limbs |
| Q51995846 | Gene silencing in the spider mite Tetranychus urticae: dsRNA and siRNA parental silencing of the Distal-less gene. |
| Q52563100 | Gene translocation links insects and crustaceans. |
| Q28751827 | General properties and phylogenetic utilities of nuclear ribosomal DNA and mitochondrial DNA commonly used in molecular systematics |
| Q51649190 | Genetic variability among Schistosoma japonicum isolates from different endemic regions in China revealed by sequences of three mitochondrial DNA genes. |
| Q55871227 | Genomics and the animal tree of life: conflicts and future prospects |
| Q35618813 | Homeotic genes and the arthropod head: expression patterns of the labial, proboscipedia, and Deformed genes in crustaceans and insects |
| Q56084299 | How good is the fossil record of arthropods? An assessment using the stratigraphic congruence of cladograms |
| Q30671173 | Hox genes and the phylogeny of the arthropods |
| Q46236272 | Hox protein mutation and macroevolution of the insect body plan |
| Q33427610 | IMGD: an integrated platform supporting comparative genomics and phylogenetics of insect mitochondrial genomes |
| Q41236718 | Inhibitory glutamate receptor channels |
| Q28648491 | Is it an ant or a butterfly? Convergent evolution in the mitochondrial gene order of Hymenoptera and Lepidoptera |
| Q48538611 | Linnaeus at 300: we are family |
| Q52932606 | Major rearrangements characterize the mitochondrial genome of the isopod Idotea baltica (Crustacea: Peracarida). |
| Q29028596 | Misconceptions regarding nuclear mitochondrial pseudogenes (Numts) may obscure detection of mitochondrial evolutionary novelties |
| Q33864075 | Mitochondrial DNA sequences of human schistosomes: the current status |
| Q28597273 | Mitochondrial Genomes of Kinorhyncha: trnM Duplication and New Gene Orders within Animals |
| Q37091387 | Mitochondrial gene rearrangements: new paradigm in the evolutionary biology and systematics |
| Q33712502 | Mitochondrial genome evolution in fire ants (Hymenoptera: Formicidae) |
| Q35761643 | Mitochondrial genome rearrangements at low taxonomic levels: three distinct mitogenome gene orders in the genus Pseudoniphargus (Crustacea: Amphipoda). |
| Q28755463 | Mitochondrial genome sequence and gene order of Sipunculus nudus give additional support for an inclusion of Sipuncula into Annelida |
| Q83623927 | Mitochondrial genome sequence of Unionicola foili (Acari: Unionicolidae): a unique gene order with implications for phylogenetic inference |
| Q83475601 | Mitochondrial genome sequence of Unionicola parkeri (Acari: Trombidiformes: Unionicolidae): molecular synapomorphies between closely-related Unionicola gill mites |
| Q52918958 | Mitochondrial genomes of Galathealinum, Helobdella, and Platynereis: sequence and gene arrangement comparisons indicate that Pogonophora is not a phylum and Annelida and Arthropoda are not sister taxa. |
| Q44980213 | Mitochondrial genomes of Vanhornia eucnemidarum (Apocrita: Vanhorniidae) and Primeuchroeus spp. (Aculeata: Chrysididae): Evidence of rearranged mitochondrial genomes within the Apocrita (Insecta: Hymenoptera). |
| Q34103287 | Mitochondrial genomes of human helminths and their use as markers in population genetics and phylogeny. |
| Q24673556 | Mitochondrial genomes suggest that hexapods and crustaceans are mutually paraphyletic |
| Q52591166 | Mitochondrial protein phylogeny joins myriapods with chelicerates. |
| Q52580598 | Mitochondrial sequence evolution in spiders: intraspecific variation in tRNAs lacking the TPsiC Arm. |
| Q47703359 | Mitogenomics: digging deeper with complete mitochondrial genomes |
| Q34310061 | Molecular variability in the Celleporella hyalina (Bryozoa; Cheilostomata) species complex: evidence for cryptic speciation from complete mitochondrial genomes |
| Q39510167 | Multiple Lines of Evidence from Mitochondrial Genomes Resolve Phylogenetic Relationships of Parasitic Wasps in Braconidae. |
| Q32028622 | Multiple independent origins of mitochondrial gene order in birds |
| Q39630742 | Multiple rearrangements in mitochondrial genomes of Isopoda and phylogenetic implications |
| Q35201892 | Next-generation sequencing, phylogenetic signal and comparative mitogenomic analyses in Metacrangonyctidae (Amphipoda: Crustacea). |
| Q34178694 | Novel gene rearrangements in the mitochondrial genome of a webspinner, Aposthonia japonica (Insecta: Embioptera). |
| Q43586358 | Numerous gene rearrangements in the mitochondrial genome of the wallaby louse, Heterodoxus macropus (Phthiraptera). |
| Q33311054 | Onychophoran cephalic nerves and their bearing on our understanding of head segmentation and stem-group evolution of Arthropoda |
| Q47621192 | Organization of the mitochondrial genome of Antarctic krill Euphausia superba (Crustacea: Malacostraca). |
| Q60078799 | Origin of the arthropod mandible |
| Q54673895 | PCR-based approach for sequencing mitochondrial genomes of decapod crustaceans, with a practical example from kuruma prawn (Marsupenaeus japonicus). |
| Q38602866 | Partially local three-way alignments and the sequence signatures of mitochondrial genome rearrangements |
| Q83520326 | Phylogenetic analyses of complete mitochondrial genome of Urechis unicinctus (Echiura) support that echiurans are derived annelids |
| Q35147690 | Phylogenetic position of Myriapoda revealed by 454 transcriptome sequencing. |
| Q28284611 | Phylogenetic relationships of annelids, molluscs, and arthropods evidenced from molecules and morphology |
| Q39164750 | Phylogenies inferred from mitochondrial gene orders-a cautionary tale from the parasitic flatworms. |
| Q28072935 | Progress, pitfalls and parallel universes: a history of insect phylogenetics |
| Q57000581 | Rapid recovery of nuclear and mitochondrial genes by genome skimming from Northern Hemisphere freshwater crayfish |
| Q42666558 | Rare genomic changes and mitochondrial sequences provide independent support for congruent relationships among the sea spiders (Arthropoda, Pycnogonida). |
| Q31160625 | Reconstructing ordinal relationships in the Demospongiae using mitochondrial genomic data |
| Q42446614 | Resolving arthropod phylogeny: exploring phylogenetic signal within 41 kb of protein-coding nuclear gene sequence |
| Q33420136 | Revaluation of deuterostome phylogeny and evolutionary relationships among chordate subphyla using mitogenome data |
| Q46040648 | Sequencing and comparing whole mitochondrial genomes of animals |
| Q34429812 | Stages of embryonic development in the amphipod crustacean, Parhyale hawaiensis |
| Q34007254 | Structure and evolution of the atypical mitochondrial genome of Armadillidium vulgare (Isopoda, Crustacea). |
| Q41479020 | Structure of the insect head in ontogeny and phylogeny: a view from Drosophila. |
| Q52921295 | The complete mitochondrial DNA sequence of the horseshoe crab Limulus polyphemus. |
| Q54405923 | The complete mitochondrial genome of Caprella scaura (Crustacea, Amphipoda, Caprellidea), with emphasis on the unique gene order pattern and duplicated control region. |
| Q28755760 | The complete mitochondrial genome of Pseudocellus pearsei (Chelicerata: Ricinulei) and a comparison of mitochondrial gene rearrangements in Arachnida |
| Q42630423 | The complete mitochondrial genome of Scutigerella causeyae (Myriapoda: Symphyla) and the phylogenetic position of Symphyla |
| Q42009488 | The complete mitochondrial genome of the Chinese peacock, Papilio bianor (Insecta: Lepidoptera: Papilionidae). |
| Q33258169 | The complete mitochondrial genome of the common sea slater, Ligia oceanica (Crustacea, Isopoda) bears a novel gene order and unusual control region features |
| Q57231803 | The complete mitochondrial genome of the endemic and highly specialized South African bee speciesRediviva intermixta(Hymenoptera: Melittidae), with a comparison with other bee mitogenomes |
| Q28652050 | The complete mitochondrial genome of the geophilomorph centipede Strigamia maritima |
| Q34330935 | The complete mitochondrial genome of the giant pill millipede, Sphaerotheriidae sp. (Myriapoda: Diplopoda: Sphaerotheriida). |
| Q28755970 | The complete mitochondrial genome of the sea spider Achelia bituberculata (Pycnogonida, Ammotheidae): arthropod ground pattern of gene arrangement |
| Q24811433 | The complete mitochondrial genome of the stomatopod crustacean Squilla mantis. |
| Q46095298 | The complete mitochondrial genome of the subterranean crustacean Metacrangonyx longipes (Amphipoda): a unique gene order and extremely short control region |
| Q39439577 | The complete mitochondrial genome of the tapeworm Cladotaenia vulturi (Cestoda: Paruterinidae): gene arrangement and phylogenetic relationships with other cestodes |
| Q46367823 | The complete mitochondrial genome sequences of Chelodina rugosa and Chelus fimbriata (Pleurodira: Chelidae): implications of a common absence of initiation sites (O(L)) in pleurodiran turtles |
| Q33233364 | The complete mitochondrial genomes of Schistosoma haematobium and Schistosoma spindale and the evolutionary history of mitochondrial genome changes among parasitic flatworms. |
| Q28769440 | The complete nucleotide sequence of the mitochondrial genome of the lungfish (Protopterus dolloi) supports its phylogenetic position as a close relative of land vertebrates. |
| Q47954894 | The complete sequence of the mitochondrial genome of Daphnia pulex (Cladocera: Crustacea). |
| Q28768107 | The complete sequence of the mitochondrial genome of Nautilus macromphalus (Mollusca: Cephalopoda) |
| Q52579527 | The complete sequence of the mitochondrial genome of the crustacean Penaeus monodon: are malacostracan crustaceans more closely related to insects than to branchiopods? |
| Q54711270 | The contribution of molecular data to our understanding of cephalopod evolution and systematics: a review |
| Q24653725 | The evolution of the Ecdysozoa |
| Q42637557 | The first mitochondrial genome for the wasp superfamily Platygastroidea: the egg parasitoid Trissolcus basalis |
| Q56949086 | The mitochondrial genome of Euphausia superba (Prydz Bay) (Crustacea: Malacostraca: Euphausiacea) reveals a novel gene arrangement and potential molecular markers |
| Q34003889 | The mitochondrial genome of Sinentomon erythranum (Arthropoda: Hexapoda: Protura): an example of highly divergent evolution. |
| Q81546625 | The mitochondrial genome of Xiphinema americanum sensu stricto (Nematoda: Enoplea): considerable economization in the length and structural features of encoded genes |
| Q28749421 | The mitochondrial genome of the 'twisted-wing parasite' Mengenilla australiensis (Insecta, Strepsiptera): a comparative study |
| Q33898398 | The mitochondrial genome of the ascalaphid owlfly Libelloides macaronius and comparative evolutionary mitochondriomics of neuropterid insects. |
| Q34609410 | The mitochondrial genome of the brachiopod Laqueus rubellus. |
| Q33538758 | The mitochondrial genome of the butterfly Papilio xuthus (Lepidoptera: Papilionidae) and related phylogenetic analyses |
| Q34605701 | The mitochondrial genome of the hemichordate Balanoglossus carnosus and the evolution of deuterostome mitochondria |
| Q52903624 | The mitochondrial genome of the onychophoran Opisthopatus cinctipes (Peripatopsidae) reflects the ancestral mitochondrial gene arrangement of Panarthropoda and Ecdysozoa. |
| Q52648410 | The mitochondrial genomes of soft ticks have an arrangement of genes that has remained unchanged for over 400 million years. |
| Q42647256 | The mitochondrial sequences of Heptathela hangzhouensis and Ornithoctonus huwena reveal unique gene arrangements and atypical tRNAs |
| Q45396091 | The mitochondrial trn-cox1 locus: rapid evolution in Pompilidae and evidence of bias in cox1 initiation and termination codon usage |
| Q42608516 | The non-photosynthetic plastid in malarial parasites and other apicomplexans is derived from outside the green plastid lineage |
| Q44926015 | The partial mitochondrial genome of the Cephalothrix rufifrons (Nemertea, Palaeonemertea): characterization and implications for the phylogenetic position of Nemertea |
| Q33838505 | The regulation of juvenile hormone production in arthropods. Functional and evolutionary perspectives |
| Q38563449 | The sequence and structure of the meadow grasshopper (Chorthippus parallelus) mitochondrial srRNA, ND2, COI, COII ATPase8 and 9 tRNA genes |
| Q28727103 | Tick-box for 3'-end formation of mitochondrial transcripts in Ixodida, basal chelicerates and Drosophila |
| Q28742917 | What is the phylogenetic signal limit from mitogenomes? The reconciliation between mitochondrial and nuclear data in the Insecta class phylogeny |
| Q57531285 | When phylogenetic assumptions are violated: base compositional heterogeneity and among-site rate variation in beetle mitochondrial phylogenomics |
| Q36261842 | Whole mitochondrial genome of the Ram's Horn Squid shines light on the phylogenetic position of the monotypic order Spirulida (Haeckel, 1896). |
| Q116675550 | A comparison of gene organisations and phylogenetic relationships of all 22 squamate species listed in South Korea using complete mitochondrial DNA |