Automatic prediction of protein interactions with large scale motion

scientific article

Automatic prediction of protein interactions with large scale motion is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1002/PROT.21759
P698PubMed publication ID17886339

P50authorRuth NussinovQ7383152
Haim WolfsonQ23823640
Dina Schneidman-DuhovnyQ47155716
P2860cites workProtein-protein docking with backbone flexibilityQ51906405
Protein-protein docking with simultaneous optimization of rigid-body displacement and side-chain conformationsQ28188949
Improved beta-protein structure prediction by multilevel optimization of nonlocal strand pairings and local backbone conformation.Q30357341
Accounting for global protein deformability during protein-protein and protein-ligand dockingQ36281420
P433issue4
P407language of work or nameEnglishQ1860
P921main subjectautomationQ184199
P304page(s)764-773
P577publication date2007-12-01
P1433published inProteinsQ7251514
P1476titleAutomatic prediction of protein interactions with large scale motion
P478volume69

Reverse relations

cites work (P2860)
Q51580099A Multidomain Flexible Docking Approach to Deal with Large Conformational Changes in the Modeling of Biomolecular Complexes
Q45984545A docking study using atomistic conformers generated via elastic network model for cyclosporin A/cyclophilin A complex.
Q40496890A flexible docking scheme to explore the binding selectivity of PDZ domains
Q34031429Accelerating protein docking in ZDOCK using an advanced 3D convolution library
Q37871850Accounting for large amplitude protein deformation during in silico macromolecular docking.
Q30357974Adaptability in protein structures: structural dynamics and implications in ligand design.
Q34188571An integrated suite of fast docking algorithms
Q44796648Automatic prediction of flexible regions improves the accuracy of protein-protein docking models
Q41043727BP-Dock: a flexible docking scheme for exploring protein-ligand interactions based on unbound structures
Q28472382Conformational transitions upon ligand binding: holo-structure prediction from apo conformations
Q37392115Convergence and combination of methods in protein-protein docking
Q50985152Designing the Sniper: Improving Targeted Human Cytolytic Fusion Proteins for Anti-Cancer Therapy via Molecular Simulation
Q42956614Detecting protein conformational changes in interactions via scaling known structures
Q44227288Drug resistance mechanism of PncA inMycobacterium tuberculosis
Q34909306FiberDock: Flexible induced-fit backbone refinement in molecular docking
Q92236981Identifying protein-protein interface via a novel multi-scale local sequence and structural representation
Q28552181Ligand Docking to Intermediate and Close-To-Bound Conformers Generated by an Elastic Network Model Based Algorithm for Highly Flexible Proteins
Q34579460Macromolecular docking restrained by a small angle X-ray scattering profile
Q55120605Next challenges in protein-protein docking: from proteome to interactome and beyond
Q33437897PTools: an opensource molecular docking library
Q38136697Perspective: Coarse-grained models for biomolecular systems
Q34059772Polymorphism in Alzheimer Abeta amyloid organization reflects conformational selection in a rugged energy landscape
Q36952164Principles of flexible protein-protein docking
Q33752262Sampling the conformation of protein surface residues for flexible protein docking
Q41840576Selection of near-native poses in CAPRI rounds 13-19.
Q42380648Sequence composition and environment effects on residue fluctuations in protein structures
Q26823990Surfing the Protein-Protein Interaction Surface Using Docking Methods: Application to the Design of PPI Inhibitors

Search more.