De Novo Sequencing of Peptides from High-Resolution Bottom-Up Tandem Mass Spectra using Top-Down Intended Methods.

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De Novo Sequencing of Peptides from High-Resolution Bottom-Up Tandem Mass Spectra using Top-Down Intended Methods. is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1002/PMIC.201600321
P698PubMed publication ID29110399

P50authorXiaowen LiuQ80621527
Theo M LuiderQ87739993
Kira VyatkinaQ89845734
Ljiljana Paša-TolićQ92883086
Martijn M van DuijnQ42159141
P2093author name stringSi Wu
Lennard J M Dekker
Nikola Tolić
P2860cites workInsPecT: identification of posttranslationally modified peptides from tandem mass spectraQ46259455
pNovo: de novo peptide sequencing and identification using HCD spectraQ46533828
High-throughput identification of proteins and unanticipated sequence modifications using a mass-based alignment algorithm for MS/MS de novo sequencing results.Q47776790
H-score, a mass accuracy driven rescoring approach for improved peptide identification in modification rich samples.Q51661847
Automated reduction and interpretation of high resolution electrospray mass spectra of large molecules.Q52080104
A universal algorithm for fast and automated charge state deconvolution of electrospray mass-to-charge ratio spectra.Q52227970
Basic local alignment search toolQ25938991
Probability-based protein identification by searching sequence databases using mass spectrometry dataQ27860736
Mass spectrometry-based proteomicsQ28182890
PEAKS: powerful software for peptide de novo sequencing by tandem mass spectrometryQ28209613
Error-tolerant identification of peptides in sequence databases by peptide sequence tagsQ28306769
Novor: Real-Time Peptide de Novo Sequencing SoftwareQ29304250
Preprocessing of tandem mass spectrometric data to support automatic protein identificationQ30818886
New data base-independent, sequence tag-based scoring of peptide MS/MS data validates Mowse scores, recovers below threshold data, singles out modified peptides, and assesses the quality of MS/MS techniquesQ30990466
High-speed data reduction, feature detection, and MS/MS spectrum quality assessment of shotgun proteomics data sets using high-resolution mass spectrometryQ33288323
A high-throughput de novo sequencing approach for shotgun proteomics using high-resolution tandem mass spectrometry.Q33537380
DirecTag: accurate sequence tags from peptide MS/MS through statistical scoringQ33607530
The Orbitrap: a new mass spectrometerQ33986511
PepNovo: de novo peptide sequencing via probabilistic network modelingQ34414526
Sequence database searches via de novo peptide sequencing by tandem mass spectrometryQ34430804
Higher-energy C-trap dissociation for peptide modification analysis.Q34667664
Deconvolution and database search of complex tandem mass spectra of intact proteins: a combinatorial approachQ35006996
Features-based deisotoping method for tandem mass spectraQ35675937
Proteome-wide identification of proteins and their modifications with decreased ambiguities and improved false discovery rates using unique sequence tagsQ37010274
Improved sequence tag generation method for peptide identification in tandem mass spectrometryQ37097041
MS-GF+ makes progress towards a universal database search tool for proteomicsQ37283260
De Novo Sequencing of Top-Down Tandem Mass Spectra: A Next Step towards Retrieving a Complete Protein SequenceQ39156137
Improved peptide identification by targeted fragmentation using CID, HCD and ETD on an LTQ-Orbitrap Velos.Q39574786
Top-down analysis of protein samples by de novo sequencing techniques.Q39760465
De Novo Sequencing of Peptides from Top-Down Tandem Mass SpectraQ40493542
De novo peptide sequencing and identification with precision mass spectrometryQ42547537
GutenTag: high-throughput sequence tagging via an empirically derived fragmentation modelQ42584462
De novo peptide sequencing via tandem mass spectrometryQ42614745
Implementation and uses of automated de novo peptide sequencing by tandem mass spectrometryQ43637771
MultiTag: multiple error-tolerant sequence tag search for the sequence-similarity identification of proteins by mass spectrometryQ44377876
Peptide sequence tags for fast database search in mass-spectrometry.Q45999304
P433issue23-24
P304page(s)1600321
P577publication date2017-12-01
P1433published inProteomicsQ15614164
P1476titleDe Novo Sequencing of Peptides from High-Resolution Bottom-Up Tandem Mass Spectra using Top-Down Intended Methods
P478volume17

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