Tuning CRISPR-Cas9 Gene Drives in Saccharomyces cerevisiae

scientific article published on 18 January 2018

Tuning CRISPR-Cas9 Gene Drives in Saccharomyces cerevisiae is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1534/G3.117.300557
P932PMC publication ID5844318
P698PubMed publication ID29348295

P50authorGregory C FinniganQ61156990
P2093author name stringEmily Roggenkamp
Madison N Schrock
Megan Halloran
Rachael M Giersch
Emily Turnquist
P2860cites workA CRISPR-Cas9 gene drive system targeting female reproduction in the malaria mosquito vector Anopheles gambiaeQ24456430
Highly efficient Cas9-mediated gene drive for population modification of the malaria vector mosquito Anopheles stephensiQ24456431
Multiplex genome engineering using CRISPR/Cas systemsQ24609428
CRISPR-mediated modular RNA-guided regulation of transcription in eukaryotesQ24625361
Genome engineering in Saccharomyces cerevisiae using CRISPR-Cas systemsQ24633670
A Programmable Dual-RNA-Guided DNA Endonuclease in Adaptive Bacterial ImmunityQ24669850
Optimizing Crops for Biocontrol of Pests and DiseaseQ26786237
Expanding the Biologist's Toolkit with CRISPR-Cas9Q26863745
Multiplexed labeling of genomic loci with dCas9 and engineered sgRNAs using CRISPRainbow.Q27313598
Structures of Cas9 Endonucleases Reveal RNA-Mediated Conformational ActivationQ27681624
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Structures of a CRISPR-Cas9 R-loop complex primed for DNA cleavageQ27703932
A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiaeQ27860636
Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiaeQ27861085
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Fusion of catalytically inactive Cas9 to FokI nuclease improves the specificity of genome modificationQ29029259
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Evolutionary dynamics of CRISPR gene drivesQ29169120
Advances in Vector Control Science: Rear-and-Release Strategies Show Promise… but Don’t Forget the BasicsQ29451751
Identification of a signal for rapid export of proteins from the nucleusQ29547742
A short amino acid sequence able to specify nuclear locationQ29547781
Naturally Occurring Off-Switches for CRISPR-Cas9.Q38725824
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Structural basis of CRISPR-SpyCas9 inhibition by an anti-CRISPR proteinQ38817347
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Guide RNA engineering for versatile Cas9 functionalityQ38979117
Harnessing the natural diversity and in vitro evolution of Cas9 to expand the genome editing toolboxQ39394606
Inhibition Mechanism of an Anti-CRISPR Suppressor AcrIIA4 Targeting SpyCas9.Q40164344
Inhibition of CRISPR-Cas9 with Bacteriophage ProteinsQ40389062
Manipulation of nuclear architecture through CRISPR-mediated chromosomal looping.Q41020733
How driving endonuclease genes can be used to combat pests and disease vectors.Q41272438
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CRISPR-PCS: a powerful new approach to inducing multiple chromosome splitting in Saccharomyces cerevisiaeQ41728692
Increasing the genome-targeting scope and precision of base editing with engineered Cas9-cytidine deaminase fusionsQ41960134
Multiplexed CRISPR/Cas9- and TAR-Mediated Promoter Engineering of Natural Product Biosynthetic Gene Clusters in YeastQ42032880
CRISPR-UnLOCK: Multipurpose Cas9-Based Strategies for Conversion of Yeast Libraries and Strains.Q42148846
National Academies Hit the Brakes on Gene Drive-Modified OrganismsQ42994874
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The creation and selection of mutations resistant to a gene drive over multiple generations in the malaria mosquito.Q44168733
Guide RNAs: A Glimpse at the Sequences that Drive CRISPR-Cas SystemsQ44865335
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In-Yeast Engineering of a Bacterial Genome Using CRISPR/Cas9.Q46985185
A CRISPR-Cas9-based gene drive platform for genetic interaction analysis in Candida albicans.Q47418459
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RICE CRISPR: Rapidly increased cut ends by an exonuclease Cas9 fusion in zebrafishQ48218784
Using CRISPR-based gene drive for agriculture pest control.Q48278829
The primary structure of the Saccharomyces cerevisiae gene for alcohol dehydrogenaseQ48405414
Precise base editing in rice, wheat and maize with a Cas9-cytidine deaminase fusion.Q50453614
Dodging silver bullets: good CRISPR gene-drive design is critical for eradicating exotic vertebrates.Q51151763
Site-specific selfish genes as tools for the control and genetic engineering of natural populations.Q53654598
An efficient one-step site-directed and site-saturation mutagenesis protocolQ29614689
DNA targeting specificity of RNA-guided Cas9 nucleasesQ29615793
High-frequency off-target mutagenesis induced by CRISPR-Cas nucleases in human cellsQ29616045
Genetic screens in human cells using the CRISPR-Cas9 systemQ29617411
Push-Pull: Chemical Ecology-Based Integrated Pest Management TechnologyQ31113484
Nuclear export signal consensus sequences defined using a localization-based yeast selection systemQ33371970
Budding yeast for budding geneticists: a primer on the Saccharomyces cerevisiae model systemQ33575824
Mechanisms and signals for the nuclear import of proteinsQ33635365
Efficient Recreation of t(11;22) EWSR1-FLI1+ in Human Stem Cells Using CRISPR/Cas9.Q33659569
Complex transcriptional modulation with orthogonal and inducible dCas9 regulators.Q33704483
CRISPR/Cas9 gene drives in genetically variable and nonrandomly mating wild populations.Q33708101
Agricultural pest control with CRISPR-based gene drive: time for public debate: Should we use gene drive for pest control?Q33748971
The maximal size of protein to diffuse through the nuclear pore is larger than 60kDaQ33781297
CRISPR/Cas9 systems have off-target activity with insertions or deletions between target DNA and guide RNA sequencesQ33791286
Overcoming evolved resistance to population-suppressing homing-based gene drives.Q33812767
Identification of an amphipathic helix important for the formation of ectopic septin spirals and axial budding in yeast axial landmark protein Bud3pQ33847744
Disabling Cas9 by an anti-CRISPR DNA mimicQ33898855
Vector control with driving Y chromosomes: modelling the evolution of resistanceQ33910481
Nuclear pore complex is able to transport macromolecules with diameters of about 39 nmQ33953659
Genome-wide binding of the CRISPR endonuclease Cas9 in mammalian cellsQ34093413
Optimization of ordered plasmid assembly by gap repair in Saccharomyces cerevisiaeQ34340960
Orthogonal Cas9 proteins for RNA-guided gene regulation and editingQ34374050
A split-Cas9 architecture for inducible genome editing and transcription modulationQ34460920
A light-inducible CRISPR-Cas9 system for control of endogenous gene activationQ34461908
Inducible in vivo genome editing with CRISPR-Cas9Q34463380
Systematic analysis of CRISPR-Cas9 mismatch tolerance reveals low levels of off-target activityQ34485743
Biology and Applications of CRISPR Systems: Harnessing Nature's Toolbox for Genome EngineeringQ34509196
Chemical and Biophysical Modulation of Cas9 for Tunable Genome EngineeringQ34512930
Diverse evolutionary roots and mechanistic variations of the CRISPR-Cas systemsQ34536517
Applications of CRISPR technologies in research and beyondQ34539796
A chemical-inducible CRISPR-Cas9 system for rapid control of genome editing.Q34540074
Classical nuclear localization signals: definition, function, and interaction with importin alphaQ34591163
Genome-wide recessive genetic screening in mammalian cells with a lentiviral CRISPR-guide RNA libraryQ35096218
Multicolor CRISPR labeling of chromosomal loci in human cells.Q35190002
Dramatic enhancement of genome editing by CRISPR/Cas9 through improved guide RNA designQ35342386
Multiplex engineering of industrial yeast genomes using CRISPRmQ35422042
Sequence determinants of improved CRISPR sgRNA designQ35876047
Optimized sgRNA design to maximize activity and minimize off-target effects of CRISPR-Cas9.Q35896845
Quantitative CRISPR interference screens in yeast identify chemical-genetic interactions and new rules for guide RNA designQ35950112
mCAL: A New Approach for Versatile Multiplex Action of Cas9 Using One sgRNA and Loci Flanked by a Programmed Target Sequence.Q36019453
Distinct patterns of Cas9 mismatch tolerance in vitro and in vivoQ36023097
CRISPRscan: designing highly efficient sgRNAs for CRISPR-Cas9 targeting in vivoQ36109068
Homology-directed repair in rodent zygotes using Cas9 and TALEN engineered proteinsQ36128900
Highly specific epigenome editing by CRISPR-Cas9 repressors for silencing of distal regulatory elementsQ36338669
DNA-binding-domain fusions enhance the targeting range and precision of Cas9.Q36372381
Relationships between natural enemy diversity and biological controlQ36397695
Diversity, classification and evolution of CRISPR-Cas systemsQ36399437
BIOSAFETY. Safeguarding gene drive experiments in the laboratoryQ36407747
Optimizing sgRNA structure to improve CRISPR-Cas9 knockout efficiency.Q36425176
Roles of septins in prospore membrane morphogenesis and spore wall assembly in Saccharomyces cerevisiaeQ36574671
Two systems of glucose repression of the GAL1 promoter in Saccharomyces cerevisiaeQ36724367
Context affects nuclear protein localization in Saccharomyces cerevisiaeQ36765182
Different Effects of sgRNA Length on CRISPR-mediated Gene Knockout EfficiencyQ37035274
Coordinate action of distinct sequence elements localizes checkpoint kinase Hsl1 to the septin collar at the bud neck in Saccharomyces cerevisiaeQ37095265
CRISPR-Cas9 nuclear dynamics and target recognition in living cells.Q37216431
An easy and efficient inducible CRISPR/Cas9 platform with improved specificity for multiple gene targetingQ37401076
A programmable Cas9-serine recombinase fusion protein that operates on DNA sequences in mammalian cellsQ37522969
Profiling single-guide RNA specificity reveals a mismatch sensitive core sequenceQ37591346
Transcriptional reprogramming in yeast using dCas9 and combinatorial gRNA strategiesQ37704855
CRISPR-mediated adaptive immune systems in bacteria and archaeaQ38089802
Mechanisms Regulating Protein Localization.Q38546818
Novel CRISPR/Cas9 gene drive constructs reveal insights into mechanisms of resistance allele formation and drive efficiency in genetically diverse populations.Q38670003
Fusion of SpCas9 to E. coli Rec A protein enhances CRISPR-Cas9 mediated gene knockout in mammalian cells.Q38713913
P4510describes a project that usesImageJQ1659584
P433issue3
P921main subjectCRISPRQ412563
Saccharomyces cerevisiaeQ719725
Cas9Q16965677
CRISPR-Cas methodQ17310682
gene driveQ22964789
P304page(s)999-1018
P577publication date2018-03-02
P1433published inG3Q5512701
P1476titleTuning CRISPR-Cas9 Gene Drives in Saccharomyces cerevisiae
P478volume8

Reverse relations

cites work (P2860)
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Q61811595Molecular safeguarding of CRISPR gene drive experiments
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Q89601212Progress towards engineering gene drives for population control

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