| scholarly article | Q13442814 |
| P8978 | DBLP publication ID | journals/bioinformatics/Taneda10 |
| P356 | DOI | 10.1093/BIOINFORMATICS/BTQ439 |
| P8608 | Fatcat ID | release_kyubjg6hz5g2ppuzdhrqdv4bim |
| P953 | full work available at URL | http://bioinformatics.oxfordjournals.org/cgi/content/abstract/26/19/2383 |
| https://academic.oup.com/bioinformatics/article-pdf/26/19/2383/48855863/bioinformatics_26_19_2383.pdf | ||
| P698 | PubMed publication ID | 20679330 |
| P5875 | ResearchGate publication ID | 45461469 |
| P2093 | author name string | Akito Taneda | |
| P2860 | cites work | RNAalifold: improved consensus structure prediction for RNA alignments | Q21284196 |
| Fast folding and comparison of RNA secondary structures | Q56272105 | ||
| Simultaneous Solution of the RNA Folding, Alignment and Protosequence Problems | Q115188651 | ||
| Inferring noncoding RNA families and classes by means of genome-scale structure-based clustering | Q21563506 | ||
| SimulFold: simultaneously inferring RNA structures including pseudoknots, alignments, and trees using a Bayesian MCMC framework | Q21563523 | ||
| CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice | Q24286950 | ||
| Accelerated probabilistic inference of RNA structure evolution | Q24522598 | ||
| MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform | Q24540347 | ||
| RAGA: RNA sequence alignment by genetic algorithm | Q24545691 | ||
| SAGA: sequence alignment by genetic algorithm | Q24546198 | ||
| PARTS: probabilistic alignment for RNA joinT secondary structure prediction | Q24646281 | ||
| RSEARCH: finding homologs of single structured RNA sequences | Q24648763 | ||
| Rfam: updates to the RNA families database | Q24655855 | ||
| Efficient pairwise RNA structure prediction and alignment using sequence alignment constraints | Q24669554 | ||
| An enhanced RNA alignment benchmark for sequence alignment programs | Q24673495 | ||
| Accurate multiple sequence-structure alignment of RNA sequences using combinatorial optimization | Q24673731 | ||
| Efficient pairwise RNA structure prediction using probabilistic alignment constraints in Dynalign | Q24684612 | ||
| A general method applicable to the search for similarities in the amino acid sequence of two proteins | Q27860563 | ||
| Murlet: a practical multiple alignment tool for structural RNA sequences | Q28299498 | ||
| Fast pairwise structural RNA alignments by pruning of the dynamical programming matrix | Q33302670 | ||
| An efficient genetic algorithm for structural RNA pairwise alignment and its application to non-coding RNA discovery in yeast | Q33390455 | ||
| BAliBASE: a benchmark alignment database for the evaluation of multiple alignment programs | Q33854471 | ||
| A common core of secondary structure of the internal transcribed spacer 2 (ITS2) throughout the Eukaryota | Q34366269 | ||
| Predicting a set of minimal free energy RNA secondary structures common to two sequences | Q34397686 | ||
| Consensus shapes: an alternative to the Sankoff algorithm for RNA consensus structure prediction | Q34434090 | ||
| STRAL: progressive alignment of non-coding RNA using base pairing probability vectors in quadratic time | Q34513713 | ||
| Multiobjective optimization in bioinformatics and computational biology | Q34624817 | ||
| RNA Sampler: a new sampling based algorithm for common RNA secondary structure prediction and structural alignment | Q34632862 | ||
| MASTR: multiple alignment and structure prediction of non-coding RNAs using simulated annealing | Q34714060 | ||
| CentroidAlign: fast and accurate aligner for structured RNAs by maximizing expected sum-of-pairs score | Q35006847 | ||
| A max-margin model for efficient simultaneous alignment and folding of RNA sequences | Q37283329 | ||
| Discovering common stem-loop motifs in unaligned RNA sequences | Q39085941 | ||
| The ITS2 Database II: homology modelling RNA structure for molecular systematics | Q43032989 | ||
| An algorithm for computing nucleic acid base-pairing probabilities including pseudoknots | Q46046388 | ||
| Robust prediction of consensus secondary structures using averaged base pairing probability matrices | Q48420017 | ||
| A fast and elitist multiobjective genetic algorithm: NSGA-II | Q56112663 | ||
| P433 | issue | 19 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | sequence alignment | Q827246 |
| P304 | page(s) | 2383-2390 | |
| P577 | publication date | 2010-08-02 | |
| P1433 | published in | Bioinformatics | Q4914910 |
| P1476 | title | Multi-objective pairwise RNA sequence alignment | |
| P478 | volume | 26 |
| Q40164888 | A novel approach to represent and compare RNA secondary structures |
| Q37122702 | Heuristics for multiobjective multiple sequence alignment |
| Q24599623 | MODENA: a multi-objective RNA inverse folding |
| Q37567559 | MOSAL: software tools for multiobjective sequence alignment. |
| Q35763365 | Multi-objective optimization for RNA design with multiple target secondary structures |
| Q30656763 | Pareto optimization in algebraic dynamic programming |
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