Standardization of pulsed-field gel electrophoresis protocols for the subtyping of Escherichia coli O157:H7, Salmonella, and Shigella for PulseNet (scientific article published in January 2006)

cites work (P2860)

Q40175487	A 10-year surveillance of antimicrobial susceptibility patterns in Shigella sonnei isolates circulating in Jiangsu Province, China
Q36426371	A Multistate Investigation of Antibiotic-Resistant Salmonella enterica Serotype I 4,[5],12:i:- Infections as Part of an International Outbreak Associated with Frozen Feeder Rodents
Q92071715	A Novel Polysaccharide Depolymerase Encoded by the Phage SH-KP152226 Confers Specific Activity Against Multidrug-Resistant Klebsiella pneumoniae via Biofilm Degradation
Q55400128	A Novel mcr-1 Variant Carried by an IncI2-Type Plasmid Identified From a Multidrug Resistant Enterotoxigenic Escherichia coli.
Q50045155	A Prolonged Outbreak of Salmonella Montevideo Infections Associated with Multiple Locations of a Restaurant Chain in Phoenix, Arizona, 2008
Q42287699	A Shiga toxin-producing Escherichia coli O157 outbreak associated with consumption of rice cakes in 2011 in Japan
Q40260184	A Waterborne Outbreak of Shigella sonnei with Resistance to Azithromycin and Third-Generation Cephalosporins in China in 2015.
Q31143325	A comparison of non-typhoidal Salmonella from humans and food animals using pulsed-field gel electrophoresis and antimicrobial susceptibility patterns
Q37730106	A large outbreak of salmonellosis associated with sandwiches contaminated with multiple bacterial pathogens purchased via an online shopping service
Q38868332	A large outbreak of typhoid fever associated with a high rate of intestinal perforation in Kasese District, Uganda, 2008-2009.
Q34795111	A longitudinal study simultaneously exploring the carriage of APEC virulence associated genes and the molecular epidemiology of faecal and systemic E. coli in commercial broiler chickens.
Q36031171	A multiplex oligonucleotide ligation-PCR as a complementary tool for subtyping of Salmonella Typhimurium
Q50039287	A national outbreak of Salmonella serotype Tennessee infections from contaminated peanut butter: a new food vehicle for salmonellosis in the United States
Q43230569	A novel vehicle for transmission of Escherichia coli O157:H7 to humans: multistate outbreak of E. coli O157:H7 infections associated with consumption of ready-to-bake commercial prepackaged cookie dough--United States, 2009.
Q44693025	A potential role of Escherichia coli pathobionts in the pathogenesis of pediatric inflammatory bowel disease
Q39299799	A recurrent, multistate outbreak of salmonella serotype agona infections associated with dry, unsweetened cereal consumption, United States, 2008.
Q41540356	A temporal study of Salmonella enterica serotypes from broiler farms in Brazil
Q39667298	A whole-genome single nucleotide polymorphism-based approach to trace and identify outbreaks linked to a common Salmonella enterica subsp. enterica serovar Montevideo pulsed-field gel electrophoresis type
Q55404021	Acinetobacter baumannii: Epidemiological and Beta-Lactamase Data From Two Tertiary Academic Hospitals in Tshwane, South Africa.
Q33983424	Adaptation in a mouse colony monoassociated with Escherichia coli K-12 for more than 1,000 days
Q26747433	Advances in Molecular Serotyping and Subtyping of Escherichia coli
Q45851407	Alcaligenes xylosoxidans Bloodstream Infections in Outpatient Oncology Office.
Q95267109	An African perspective on the prevalence, fate and effects of carbapenem resistance genes in hospital effluents and wastewater treatment plant (WWTP) final effluents: A critical review
Q42861234	An Outbreak of Multidrug-ResistantSalmonella entericaSerotype Oranienburg in Michigan Dairy Calves
Q97067574	An Unusual Salmonella Enteritidis Strain Carrying a Modified Virulence Plasmid Lacking the prot6e Gene Represents a Geographically Widely Distributed Lineage
Q35156291	An association of genotypes and antimicrobial resistance patterns among Salmonella isolates from pigs and humans in Taiwan
Q50030648	An outbreak of Salmonella Infantis gastroenteritis in a residential aged care facility associated with thickened fluids
Q34205018	An outbreak of extremely drug-resistant Pseudomonas aeruginosa in a tertiary care pediatric hospital in Italy
Q50027401	An outbreak of salmonella chester infection in Canada: rare serotype, uncommon exposure, and unusual population demographic facilitate rapid identification of food vehicle
Q43174407	Analysis of Salmonella and enterococci isolated from rendered animal products
Q64234885	Analysis of Serovar Typhi by Outer Membrane Protein (OMP) Profiling, Random Amplification of Polymorphic DNA (RAPD) and Pulsed Field Gel Electrophoresis (PFGE)
Q38724222	Analysis of bla(CTX-M)-carrying plasmids from Escherichia coli isolates collected in the BfT-GermVet study
Q43360456	Animal and environmental impact on the presence and distribution of Salmonella and Escherichia coli in hydroponic tomato greenhouses
Q97644667	Antibiotic Susceptibility, Clonality, and Molecular Characterization of Carbapenem-Resistant Clinical Isolates of Acinetobacter baumannii from Washington DC
Q55517942	Antibiotic resistance and molecular characterization of the hydrogen sulfide-negative phenotype among diverse Salmonella serovars in China.
Q41560371	Antibiotic resistance pattern and gene expression of non-typhoid Salmonella in riversheds
Q57298048	Antibiotic resistance, virulence factors and genotyping of Uropathogenic strains
Q35796852	Antimicrobial Resistance and Molecular Investigation of H2S-Negative Salmonella enterica subsp. enterica serovar Choleraesuis Isolates in China
Q39686960	Antimicrobial Resistance of Escherichia fergusonii Isolated from Broiler Chickens
Q28547779	Antimicrobial Resistance of Shigella flexneri Serotype 1b Isolates in China
Q49955264	Antimicrobial Susceptibility and Molecular Typing of Salmonella Senftenberg Isolated from Humans and Other Sources in Shanghai, China, 2005 to 2011.
Q41352968	Antimicrobial and disinfectant resistance of Escherichia coli isolated from giant pandas
Q42622563	Antimicrobial drug resistance patterns among cattle- and human-associated Salmonella strains
Q43167805	Antimicrobial resistance and class 1 integron-associated gene cassettes in Salmonella enterica serovar Typhimurium isolated from pigs at slaughter and abattoir environment
Q64997811	Antimicrobial resistance and genetic characterization of Shigella spp. in Shanxi Province, China, during 2006-2016.
Q98178670	Antimicrobial resistance and genotypic relatedness of environmental staphylococci in semi-extensive dairy farms
Q34539159	Antimicrobial resistance and integron gene cassette arrays in commensal Escherichia coli from human and animal sources in IRI.
Q28484454	Antimicrobial resistance and spread of multi drug resistant Escherichia coli isolates collected from nine urology services in the Euregion Meuse-Rhine
Q50011090	Antimicrobial resistance and virulence profiles of Salmonella isolated from butcher shops in Minas Gerais, Brazil
Q34596678	Antimicrobial resistance in Salmonella enterica Serovar Typhi isolates from Bangladesh, Indonesia, Taiwan, and Vietnam
Q36958123	Antimicrobial resistance in Salmonella enterica serovar Heidelberg isolates from retail meats, including poultry, from 2002 to 2006.
Q28487980	Antimicrobial resistance in invasive non-typhoid Salmonella from the Democratic Republic of the Congo: emergence of decreased fluoroquinolone susceptibility and extended-spectrum beta lactamases
Q45798616	Antimicrobial resistance of Salmonella enterica isolates from bulk tank milk and milk filters in the United States
Q92584909	Antimicrobial resistance of bacterial pathogens isolated from canine urinary tract infections
Q28485932	Antimicrobial resistance, virulence factors and genetic diversity of Escherichia coli isolates from household water supply in Dhaka, Bangladesh
Q37355751	Antimicrobial resistance-conferring plasmids with similarity to virulence plasmids from avian pathogenic Escherichia coli strains in Salmonella enterica serovar Kentucky isolates from poultry.
Q46947052	Application of molecular biological techniques to analyze Salmonella seasonal distribution in stream water
Q38726745	ArmA methyltransferase in a monophasic Salmonella enterica isolate from food
Q41910288	Assessment of whole-genome mapping in a well-defined outbreak of Salmonella enterica serotype Saintpaul
Q40154538	Association of Atypical Enteropathogenic Escherichia coli with Diarrhea and Related Mortality in Kittens
Q43243669	Association of extended-spectrum β-lactamase VEB-5 and 16S rRNA methyltransferase armA in Salmonella enterica from the United Kingdom
Q33887460	Automated use of WHONET and SaTScan to detect outbreaks of Shigella spp. using antimicrobial resistance phenotypes
Q42577282	Avian-pathogenic Escherichia coli strains are similar to neonatal meningitis E. coli strains and are able to cause meningitis in the rat model of human disease
Q37664390	Azithromycin-Nonsusceptible Shigella flexneri 3a in Men Who Have Sex with Men, Taiwan, 2015-2016.
Q90167957	Bacteremia Caused by Salmonella Poona in a Healthy Adult in Tokyo, Japan
Q30377265	Bacterial strain typing in the genomic era.
Q33868172	Broiler chickens as source of human fluoroquinolone-resistant Escherichia coli, Iceland
Q90652301	CLONAL SPREAD OF YERSINIA ENTEROCOLITICA 1B/O:8 IN MULTIPLE ZOO SPECIES
Q35039404	CRISPR-MVLST subtyping of Salmonella enterica subsp. enterica serovars Typhimurium and Heidelberg and application in identifying outbreak isolates
Q40587151	CTX-M-15-H30Rx-ST131 subclone is one of the main causes of healthcare-associated ESBL-producing Escherichia coli bacteraemia of urinary origin in Spain
Q93207004	Carbapenem-resistant Acinetobacter baumannii from Air and Patients of Intensive Care Units
Q43818826	Cattle drive Salmonella infection in the wildlife-livestock interface.
Q28538055	Cefotaxime resistant Escherichia coli collected from a healthy volunteer; characterisation and the effect of plasmid loss
Q43169864	Changes in aac(6')-Ib-cr prevalence and fluoroquinolone resistance in nosocomial isolates of Escherichia coli collected from 1991 through 2005.
Q42112165	Changes in qnr prevalence and fluoroquinolone resistance in clinical isolates of Klebsiella pneumoniae and Enterobacter spp. collected from 1990 to 2005.
Q36171128	Changing plasmid types responsible for extended spectrum cephalosporin resistance in Escherichia coli O157:H7 in the United States, 1996-2009.
Q28537719	Changing trends in the prevalence of Shigella species: emergence of multi-drug resistant Shigella sonnei biotype g in Bangladesh
Q41013169	Characterisation of Yersinia pseudotuberculosis isolated from animals with yersiniosis during 1996-2013 indicates the presence of pathogenic and Far Eastern strains in Italy
Q36532195	Characteristics of Salmonella spp. Isolated from Wild Birds Confiscated in Illegal Trade Markets, Rio de Janeiro, Brazil
Q44069168	Characteristics of ciprofloxacin and cephalosporin resistant Escherichia coli isolated from turkeys in Great Britain
Q42935507	Characteristics of clinical Shiga toxin-producing Escherichia coli isolated from British Columbia
Q90226810	Characterization of CRISPR-Cas Systems in Serratia marcescens Isolated from Rhynchophorus ferrugineus (Olivier, 1790) (Coleoptera: Curculionidae)
Q47115317	Characterization of Colistin-Resistant Escherichia coli Isolated from Diseased Pigs in France
Q54385879	Characterization of Escherichia coli O157:H7 in New Zealand using multiple-locus variable-number tandem-repeat analysis.
Q37545487	Characterization of Escherichia coli O157:H7 strains from contaminated raw beef trim during "high event periods".
Q36970407	Characterization of Escherichia coli O157:H7 strains isolated from supershedding cattle.
Q36066871	Characterization of Foodborne Outbreaks of Salmonella enterica Serovar Enteritidis with Whole-Genome Sequencing Single Nucleotide Polymorphism-Based Analysis for Surveillance and Outbreak Detection
Q92752746	Characterization of Non-O157 Escherichia coli from Cattle Faecal Samples in the North-West Province of South Africa
Q40458538	Characterization of Resistance Genes and Plasmids from Outbreaks and Illness Clusters Caused by Salmonella Resistant to Ceftriaxone in the United States, 2011-2012.
Q42224236	Characterization of Salmonella Enteritidis strains isolated from poultry and farm environments in Brazil.
Q92636875	Characterization of Salmonella Isolates from Wastewater Treatment Plant Influents to Estimate Unreported Cases and Infection Sources of Salmonellosis
Q89597303	Characterization of Salmonella enterica Isolates from Diseased Poultry in Northern China between 2014 and 2018
Q34294260	Characterization of Salmonella enterica serovar Enteritidis isolates recovered from blood and stool specimens in Thailand
Q36844800	Characterization of Salmonella enterica serovar Heidelberg from turkey-associated sources
Q35191444	Characterization of Salmonella enterica serovar Typhimurium isolates harboring a chromosomally encoded CMY-2 beta-lactamase gene located on a multidrug resistance genomic island.
Q33996933	Characterization of Salmonella occurring at high prevalence in a population of the land iguana Conolophus subcristatus in Galápagos Islands, Ecuador
Q34274130	Characterization of Shigella sonnei in Malaysia, an increasingly prevalent etiologic agent of local shigellosis cases
Q35814364	Characterization of Staphylococcus aureus from Humans and a Comparison with İsolates of Animal Origin, in North Dakota, United States
Q54336955	Characterization of antimicrobial resistance of Escherichia coli recovered from foods of animal and fish origin in Korea.
Q64883068	Characterization of avian pathogenic Escherichia coli isolated from free-range helmeted guineafowl.
Q36206504	Characterization of blaCMY plasmids and their possible role in source attribution of Salmonella enterica serotype Typhimurium infections
Q34597802	Characterization of blaTEM-52-carrying plasmids of extended-spectrum-β-lactamase-producing Salmonella enterica isolates from chicken meat with a common supplier in Japan
Q33364609	Characterization of endemic Shigella boydii strains isolated in Iran by serotyping, antimicrobial resistance, plasmid profile, ribotyping and pulsed-field gel electrophoresis
Q33531067	Characterization of environmentally persistent Escherichia coli isolates leached from an Irish soil.
Q28270162	Characterization of extended-spectrum cephalosporin-resistant Salmonella enterica serovar Heidelberg isolated from food animals, retail meat, and humans in the United States 2009
Q35807175	Characterization of isolates of Salmonella enterica serovar Stanley, a serovar endemic to Asia and associated with travel
Q41516287	Characterization of persistent and transient Escherichia coli isolates recovered from clinical mastitis episodes in dairy cows
Q43010585	Characterization of quinolone resistance in Escherichia coli strains of animal origin from Italy
Q58702305	Characterization of serovars recovered from meat products legally and illegally imported into the EU reveals the presence of multiresistant and AmpC-producing isolates
Q64227248	Characterization of the emerging multidrug-resistant Salmonella enterica serovar Indiana strains in China
Q42358855	Chicken Meat as a Reservoir of Colistin-Resistant Escherichia coli Strains Carrying mcr-1 Genes in South America.
Q35844407	Chicken as reservoir for extraintestinal pathogenic Escherichia coli in humans, Canada
Q92816016	Ciprofloxacin-Resistant Salmonella enterica Serovar Kentucky ST198 in Broiler Chicken Supply Chain and Patients, China, 2010-2016
Q42584791	Ciprofloxacin-Resistant Shigella sonnei Associated with Travel to India
Q35997526	Ciprofloxacin-resistant Salmonella enterica Serotype Typhi, United States, 1999-2008.
Q37020504	Ciprofloxacin-resistant Salmonella enterica serovar Kentucky in Canada
Q35877527	Ciprofloxacin-resistant Shigella sonnei among men who have sex with men, Canada, 2010.
Q40690596	Circulating of CMY-2 β-lactamase gene in weaned pigs and their environment in a commercial farm and the effect of feed supplementation with a clay mineral
Q34529235	Clinical characteristics of bloodstream infections due to ampicillin-sulbactam-resistant, non-extended- spectrum-beta-lactamase-producing Escherichia coli and the role of TEM-1 hyperproduction.
Q36398247	Clinical features of human salmonellosis caused by bovine-associated subtypes in New York
Q92563685	Clinically Unreported Salmonellosis Outbreak Detected via Comparative Genomic Analysis of Municipal Wastewater Salmonella Isolates
Q41220739	Clonal Dissemination of OXA-370-Producing Klebsiella pneumoniae in Rio de Janeiro, Brazil.
Q35723481	Clonal Occurrence of Salmonella Weltevreden in Cultured Shrimp in the Mekong Delta, Vietnam
Q41725613	Clonal dissemination of multilocus sequence type 11 Klebsiella pneumoniae carbapenemase - producing K. pneumoniae in a Chinese teaching hospital
Q33519189	Clonal dissemination of the multi-drug resistant Salmonella enterica serovar Braenderup, but not the serovar Bareilly, of prevalent serogroup C1 Salmonella from Taiwan
Q54326865	Clonal relations of atypical enteropathogenic Escherichia coli O157:H16 strains isolated from various sources from several countries.
Q37450920	Clonal relationship among atypical enteropathogenic Escherichia coli strains isolated from different animal species and humans
Q86425180	Clonally related methicillin-resistant Staphylococcus aureus isolated from short-finned pilot whales (Globicephala macrorhynchus), human volunteers, and a bayfront cetacean rehabilitation facility
Q35035813	Cluster of Escherichia coli isolates producing a plasmid-mediated OXA-48 β-lactamase in a Spanish hospital in 2012.
Q86524376	Cluster of Puerperal Fever in an Obstetric Ward: A Reminder of Ignaz Semmelweis
Q89456253	Colistin-resistant Escherichia coli carrying mcr-1 in food, water, hand rinse, and healthy human gut in Bangladesh
Q64066679	Colistin-resistant Escherichia coli with mcr genes in the livestock of rural small-scale farms in Ecuador
Q45094194	Combined high pressure and thermal processing on inactivation of type A and proteolytic type B spores of Clostridium botulinum.
Q46803059	Combined high pressure and thermal processing on inactivation of type E and nonproteolytic type B and F spores of Clostridium botulinum
Q41878231	Commonality among fluoroquinolone-resistant sequence type ST131 extraintestinal Escherichia coli isolates from humans and companion animals in Australia
Q33727224	Community-acquired Pseudomonas aeruginosa-pneumonia in a previously healthy man occupationally exposed to metalworking fluids
Q38968711	Comparative analysis of Shigella sonnei biotype g isolated from paediatric populations in Egypt, 1999-2005.
Q34916552	Comparative analysis of subtyping methods against a whole-genome-sequencing standard for Salmonella enterica serotype Enteritidis
Q35103147	Comparative phenotypic and genotypic characterization of Salmonella spp. in pig farms and slaughterhouses in two provinces in northern Thailand
Q40007206	Comparative study of all Salmonella enterica serovar Enteritidis strains isolated from food and food animals in Greece from 2008 to 2010 with clinical isolates
Q89981361	Comparing PFGE, MLST, and WGS in monitoring the spread of macrolide and rifampin resistant Rhodococcus equi in horse production
Q35968595	Comparison between Salmonella enterica Serotype Enteritidis Genotyping Methods and Phage Type.
Q40028752	Comparison of Escherichia coli ST131 pulsotypes, by epidemiologic traits, 1967-2009.
Q34741346	Comparison of Salmonella enterica serovar Heidelberg isolates from human patients with those from animal and food sources
Q37014939	Comparison of six commercial kits to extract bacterial chromosome and plasmid DNA for MiSeq sequencing
Q37026532	Comparison of typing methods with a new procedure based on sequence characterization for Salmonella serovar prediction
Q35167277	Comparison of whole genome sequences from human and non-human Escherichia coli O26 strains.
Q42282929	Continuous surveillance to reduce extended-spectrum β-lactamase Klebsiella pneumoniae colonization in the neonatal intensive care unit
Q41144524	Contribution of Avian Salmonella enterica Isolates to Human Salmonellosis Cases in Constantine (Algeria).
Q30458327	Control of simultaneous outbreaks of carbapenemase-producing enterobacteriaceae and extensively drug-resistant Acinetobacter baumannii infection in an intensive care unit using interventions promoted in the Centers for Disease Control and Prevention
Q41749406	Creating student sleuths: how a team of graduate students helped solve an outbreak of Salmonella Heidelberg infections associated with kosher broiled chicken livers.
Q45986056	Cross-sectional survey of indicator and pathogenic bacteria on vegetables sold from Asian vendors at farmers' markets in northern California.
Q33548104	DNA microarray analysis of Salmonella serotype Typhimurium strains causing different symptoms of disease
Q30699787	Data mining tools for Salmonella characterization: application to gel-based fingerprinting analysis
Q49997277	Demonstration of persistent contamination of a cooked egg product production facility with Salmonella enterica serovar Tennessee and characterization of the persistent strain
Q34079853	Detection and Characterization of Shiga Toxin Producing Escherichia coli, Salmonella spp., and Yersinia Strains from Human, Animal, and Food Samples in San Luis, Argentina.
Q40682992	Detection and characterization of extended-spectrum β-lactamase-producing Escherichia coli from chicken production chains in Nigeria
Q40371245	Detection of Carbapenemase Genes in Aquatic Environments in Rio de Janeiro, Brazil.
Q38376652	Detection of Salmonella enterica Serovar Montevideo and Newport in Free-ranging Sea Turtles and Beach Sand in the Caribbean and Persistence in Sand and Seawater Microcosms.
Q30420290	Detection of Salmonella enterica isolates producing CTX-M Cephalosporinase in U.S. livestock populations
Q34738471	Detection of Shiga toxin-producing Escherichia coli serotypes O26:H11, O103:H2, O111:H8, O145:H28, and O157:H7 in raw-milk cheeses by using multiplex real-time PCR.
Q64912091	Detection of VIM-1-Producing Enterobacter cloacae and Salmonella enterica Serovars Infantis and Goldcoast at a Breeding Pig Farm in Germany in 2017 and Their Molecular Relationship to Former VIM-1-Producing S. Infantis Isolates in German Livestock P
Q34432131	Detection of clonal group A Escherichia coli isolates from broiler chickens, broiler chicken meat, community-dwelling humans, and urinary tract infection (UTI) patients and their virulence in a mouse UTI model
Q44803816	Detection of genes encoding for virulence and adherence factors in Escherichia coli isolated in slaughtered Sarda breed sheep.
Q88214500	Detection of plasmid-borne extended-spectrum β-lactamase (ESBL) genes in Escherichia coli isolates from bovine mastitis
Q40964432	Development and comparison of a generic multiple-locus variable-number tandem repeat analysis with pulsed-field gel electrophoresis for typing of Salmonella enterica subsp. enterica.
Q38736293	Development and evaluation of a core genome multilocus typing scheme for whole-genome sequence-based typing of Acinetobacter baumannii
Q58579936	Development of a pig infection model with colistin-resistant Escherichia coli
Q34770102	Development of a robust method for isolation of shiga toxin-positive Escherichia coli (STEC) from fecal, plant, soil and water samples from a leafy greens production region in California
Q50055392	Diagnosis by culture and PCR of Salmonella abortusovis infection under clinical conditions in aborting sheep in Switzerland
Q41638121	Diagnosis of an outbreak of Salmonella typhimurium in chinchillas (Chinchilla lanigera) by pulsed-field gel electrophoresis.
Q36308345	Differences in sheep and goats milk microbiological profile between conventional and organic farming systems in Greece
Q28480994	Differing burden and epidemiology of non-Typhi Salmonella bacteremia in rural and urban Kenya, 2006-2009
Q30375508	Diffusion and persistence of multidrug resistant Salmonella Typhimurium strains phage type DT120 in southern Italy
Q89691864	Disentangling outbreaks using whole-genome sequencing: concurrent multistate outbreaks of Salmonella Kottbus in Germany, 2017
Q46421860	Disinfectant and antibiotic susceptibility profiles of Escherichia coli O157:H7 strains from cattle carcasses, feces, and hides and ground beef from the United States
Q47106374	Dissemination of mcr-1-Carrying Plasmids among Colistin-Resistant Salmonella Strains from Humans and Food-Producing Animals in Taiwan
Q89453935	Dissemination of the mcr-1 colistin resistance gene among pigs: An experimental study
Q36450035	Distribution and Diversity of Salmonella Strains in Shipments of Hatchling Poultry, United States, 2013
Q49982300	Distribution and Molecular Characterization of Salmonella enterica Hypermutators in Retail Food in China
Q33743388	Distributions of Salmonella subtypes differ between two U.S. produce-growing regions
Q34261096	Diverse virulence gene content of Shiga toxin-producing Escherichia coli from finishing swine
Q35679576	Diversity and Persistence of Salmonella enterica Strains in Rural Landscapes in the Southeastern United States
Q28551095	Diversity of Multi-Drug Resistant Avian Pathogenic Escherichia coli (APEC) Causing Outbreaks of Colibacillosis in Broilers during 2012 in Spain
Q34594433	Diversity of Salmonella isolates from central Florida surface waters
Q43167781	Diversity of class 1 and 2 integrons detected in Escherichia coli isolates from diseased and apparently healthy dogs
Q34738269	Diversity of multidrug-resistant salmonella enterica strains associated with cattle at harvest in the United States.
Q51563501	Documented Transmission of Extended-Spectrum Beta-Lactamase-Producing Klebsiella pneumoniae From Patient to Gastroscope.
Q54200152	Drug resistance and virulence of uropathogenic Escherichia coli from Shanghai, China.
Q82555057	Dynamics of Escherichia coli O157:H7 outbreak detection and investigation, Minnesota 2000-2008
Q41002871	ERIC-PCR genotyping of field isolates of Salmonella enterica subsp. enterica serovar Gallinarum biovars Gallinarum and Pullorum
Q92999140	Early Dissemination of qnrE1 in Salmonella enterica Serovar Typhimurium from Livestock in South America
Q34339268	Early strains of multidrug-resistant Salmonella enterica serovar Kentucky sequence type 198 from Southeast Asia harbor Salmonella genomic island 1-J variants with a novel insertion sequence
Q35580147	Ecological prevalence, genetic diversity, and epidemiological aspects of Salmonella isolated from tomato agricultural regions of the Virginia Eastern Shore
Q34933894	Effect of proximity to a cattle feedlot on Escherichia coli O157:H7 contamination of leafy greens and evaluation of the potential for airborne transmission.
Q36933382	Emergence and Diversity of Salmonella enterica Serovar Indiana Isolates with Concurrent Resistance to Ciprofloxacin and Cefotaxime from Patients and Food-Producing Animals in China
Q92135096	Emergence and Evolution of High-Level Cephalosporin-Resistant Salmonella Goldcoast in Northern Taiwan
Q33899899	Emergence and prevalence of non-H2S-producing Salmonella enterica serovar Senftenberg isolates belonging to novel sequence type 1751 in China
Q33627338	Emergence of a new multidrug-resistant serotype X variant in an epidemic clone of Shigella flexneri
Q37383945	Emergence of blaKPC-containing Klebsiella pneumoniae in a long-term acute care hospital: a new challenge to our healthcare system
Q33798473	Emergence of clinical Salmonella enterica serovar Typhimurium isolates with concurrent resistance to ciprofloxacin, ceftriaxone, and azithromycin
Q40123133	Emergence of methicillin-resistant Staphylococcus aureus SCCmec type IV/V epidemic clones in a large teaching hospital in China
Q54340316	Emergence of multidrug-resistant NDM-1-producing Gram-negative bacteria in Bangladesh.
Q41623992	Emission of ESBL/AmpC-producing Escherichia coli from pig fattening farms to surrounding areas
Q33877766	Enhanced subtyping scheme for Salmonella enteritidis
Q30419598	Enteroaggregative Escherichia coli O78:H10, the cause of an outbreak of urinary tract infection
Q34286149	Enteroaggregative Shiga toxin-producing Escherichia coli of serotype O104:H4 in Belgium and Luxembourg.
Q44118721	Enterohemorrhagic Escherichia coli O26:H11/H-: a new virulent clone emerges in Europe
Q33983457	Enumeration and characterization of antimicrobial-resistant Escherichia coli bacteria in effluent from municipal, hospital, and secondary treatment facility sources
Q40205307	Environmental Spread of New Delhi Metallo-β-Lactamase-1-Producing Multidrug-Resistant Bacteria in Dhaka, Bangladesh.
Q36521327	Epidemiologic and Genotypic Review of Carbapenemase-Producing Organisms in British Columbia, Canada, between 2008 and 2014.
Q35792604	Epidemiologic and molecular analysis of human tularemia, United States, 1964-2004.
Q41542272	Epidemiological analysis of the dynamic and diversity of Salmonella spp. in five German pig production clusters using pheno- and genotyping methods: an exploratory study
Q35106497	Epidemiological evidence that garden birds are a source of human salmonellosis in England and Wales
Q37639165	Epidemiology and molecular characterization of bacteremia due to carbapenem-resistant Klebsiella pneumoniae in transplant recipients
Q58385962	Epidemiology and molecular characterization of multidrug-resistant isolates harboring group 1 extended-spectrum β-lactamases causing bacteremia and urinary tract infection in Manhiça, Mozambique
Q37422089	Epidemiology of Klebsiella pneumoniae bloodstream infections in a teaching hospital: factors related to the carbapenem resistance and patient mortality
Q36276102	Epidemiology of a Salmonella enterica subsp. enterica serovar Typhimurium strain associated with a songbird outbreak
Q50024572	Epidemiology of subclinical salmonellosis in wild birds from an area of high prevalence of pig salmonellosis: phenotypic and genetic profiles of Salmonella isolates.
Q35877185	Escherichia albertii in wild and domestic birds
Q36148027	Escherichia coli O104 associated with human diarrhea, South Africa, 2004-2011
Q35844431	Escherichia coli O104:H4 infections and international travel
Q41097613	Escherichia coli O157:H7 Outbreak Associated with Restaurant Beef Grinding
Q40761591	Escherichia coli O157:H7 in feral swine near spinach fields and cattle, central California coast
Q41386262	Escherichia coli O157:H7 in wild boars (Sus scrofa) and Iberian ibex (Capra pyrenaica) sharing pastures with free-ranging livestock in a natural environment in Spain.
Q42254118	Escherichia coli O157:H7 infections associated with consumption of locally grown strawberries contaminated by deer.
Q90353826	Escherichia coli O25b-ST131 and O16-ST131 causing urinary tract infection in women in Changsha, China: molecular epidemiology and clinical characteristics
Q40035158	Escherichia coli Probiotic Strain ED1a in Pigs Has a Limited Impact on the Gut Carriage of Extended-Spectrum-β-Lactamase-Producing E. coli
Q43348840	Escherichia coli contamination and health aspects of soil and tomatoes (Solanum lycopersicum L.) subsurface drip irrigated with on-site treated domestic wastewater
Q44338762	Escherichia coli contamination of lettuce grown in soils amended with animal slurry
Q37220795	Escherichia coli sequence type 131 (ST131) subclone H30 as an emergent multidrug-resistant pathogen among US veterans
Q35867741	Escherichia coli serotype O55:H7 diversity supports parallel acquisition of bacteriophage at Shiga toxin phage insertion sites during evolution of the O157:H7 lineage
Q30370244	Evaluation and validation of a PulseNet standardized pulsed-field gel electrophoresis protocol for subtyping Vibrio parahaemolyticus: an international multicenter collaborative study.
Q37623590	Evaluation of molecular typing of foodborne pathogens in European reference laboratories from 2012 to 2013
Q35138922	Evaluation of physical coverings used to control Escherichia coli O157:H7 at the compost heap surface
Q45981401	Evaluation of the Live Biotherapeutic Product, Asymptomatic Bacteriuria Escherichia coli 2-12, in Healthy Dogs and Dogs with Clinical Recurrent UTI.
Q64230583	Evidence for Clonally Associated Increasing Rates of Azithromycin Resistant in Rio de Janeiro, Brazil
Q40004203	Evidence for recent acquisition and successful transmission of bla(CTX-M-15) in Salmonella enterica in South Korea
Q61779063	Evolution of tigecycline- and colistin-resistant CRKP (carbapenem-resistant Klebsiella pneumoniae) in vivo and its persistence in the GI tract
Q42573068	Expansion of Salmonella enterica Serovar Typhimurium ST34 Clone Carrying Multiple Resistance Determinants in China
Q90383122	Experimental In-Field Transfer and Survival of Escherichia coli from Animal Feces to Romaine Lettuce in Salinas Valley, California
Q40310562	Experimental evolution of a facultative thermophile from a mesophilic ancestor
Q92904538	Experimental infection of pigs by Salmonella Derby, S. Typhimurium and monophasic variant of S. Typhimurium: Comparison of colonization and serology
Q38199189	Extended-spectrum β-lactamase-producing Escherichia coli isolated from poultry: a review of current problems, illustrated with some laboratory findings.
Q39256669	Extensive dissemination of CTX-M-1- and CMY-2-producing Escherichia coli in poultry farms in Tunisia
Q38675848	External quality assessment for molecular typing of Salmonella 2013-2015: performance of the European national public health reference laboratories.
Q35764055	Extraintestinal Pathogenic and Antimicrobial-Resistant Escherichia coli Contamination of 56 Public Restrooms in the Greater Minneapolis-St. Paul Metropolitan Area
Q42598283	Family Outbreak of Shiga Toxin–producingEscherichia coliO123:H–, France, 2009
Q36570511	Farm animal contact as risk factor for transmission of bovine-associated Salmonella subtypes
Q36379396	Features of infections due to Klebsiella pneumoniae carbapenemase-producing Escherichia coli: emergence of sequence type 131.
Q42593044	First Report of Anaerobic Isolation of Salmonella enterica from Liver Abscesses of Feedlot Cattle.
Q28354075	First Report of Group CTX-M-9 Extended Spectrum Beta-Lactamases in Escherichia coli Isolates from Pediatric Patients in Mexico
Q46977802	First clinical isolates of Cronobacter spp. (Enterobacter sakazakii) in Argentina: characterization and subtyping by pulsed-field gel electrophoresis
Q35786002	First description of plasmid-mediated quinolone resistance determinants and β-lactamase encoding genes in non-typhoidal Salmonella isolated from humans, one companion animal and food in Romania
Q40114321	First report of Salmonella enterica serovar Infantis in common swifts (Apus apus).
Q42691600	First report of a Salmonella enterica serovar typhimurium isolate with carbapenemase (KPC-2) in Colombia
Q41513128	First report of the blaVIM gene in environmental isolates of Buttiauxella sp.
Q42410372	Fluoroquinolone-resistant typhoid, South Africa
Q40315973	Foodborne outbreak of Salmonella subspecies IV infections associated with contamination from bearded dragons
Q50028718	Four multistate outbreaks of human Salmonella infections associated with live poultry contact, United States, 2009.
Q42198699	Frequencies of virulence genes and pulse field gel electrophoresis fingerprints in Escherichia coli isolates from canine pyometra
Q51369977	Fresh steam-flaked corn in cattle feedlots is an important site for fecal coliform contamination by house flies.
Q40300087	Further investigations on the epidemiology of fowl typhoid in Brazil
Q90574301	Genetic Characterization of Antimicrobial-Resistant Escherichia coli Isolated from a Mixed-Use Watershed in Northeast Georgia, USA
Q28548463	Genetic Characterization of Carbapenem-Resistant Enterobacteriaceae and the Spread of Carbapenem-Resistant Klebsiella pneumonia ST340 at a University Hospital in Thailand
Q36434110	Genetic Diversity of Clostridium sporogenes PA 3679 Isolates Obtained from Different Sources as Resolved by Pulsed-Field Gel Electrophoresis and High-Throughput Sequencing
Q92001002	Genetic Diversity of Non-O157 Shiga Toxin-Producing Escherichia coli Recovered From Patients in Michigan and Connecticut
Q52629701	Genetic Relationships among Multidrug-Resistant Salmonella enterica Serovar Typhimurium Strains from Humans and Animals.
Q38723696	Genetic analysis of Salmonella enterica serovar Gallinarum biovar Pullorum based on characterization and evolution of CRISPR sequence
Q43118432	Genetic analysis of multidrug-resistant Salmonella enterica serovars Stanley and Typhimurium from cattle
Q37260323	Genetic and Phenotypic Characterization of a Salmonella enterica serovar Enteritidis Emerging Strain with Superior Intra-macrophage Replication Phenotype
Q40693753	Genetic and phenotypic evidence of the Salmonella enterica serotype Enteritidis human-animal interface in Chile
Q49950809	Genetic basis for loss of immuno-reactive O-chain in Salmonella enterica serovar Enteritidis veterinary isolates
Q35008968	Genetic characterization of Shigella flexneri isolates in Guizhou Province, China
Q37263622	Genetic characterization of atypical enteropathogenic Escherichia coli isolates from ewes' milk, sheep farm environments, and humans by multilocus sequence typing and pulsed-field gel electrophoresis
Q38987400	Genetic diversity and antibiotic resistance in Shigella dysenteriae and Shigella boydii strains isolated from children aged <5 years in Egypt
Q34422040	Genetic diversity and antimicrobial resistance among isolates of Escherichia coli O157: H7 from feces and hides of super-shedders and low-shedding pen-mates in two commercial beef feedlots
Q54281167	Genetic diversity and virulence profiles of Escherichia coli causing salpingitis and peritonitis in broiler breeders.
Q41201536	Genetic diversity of Escherichia coli isolates of animal and environmental origins from an integrated poultry production chain
Q35061227	Genetic diversity of food-isolated Salmonella strains through Pulsed Field Gel Electrophoresis (PFGE) and Enterobacterial Repetitive Intergenic Consensus (ERIC-PCR).
Q43168582	Genetic diversity, anti-microbial resistance, plasmid profile and frequency of the Vi antigen in Salmonella Dublin strains isolated in Brazil.
Q40435899	Genetic elements associated with antimicrobial resistance among avian pathogenic Escherichia coli
Q50011823	Genetic lineages of Salmonella enterica serovar Kentucky spreading in pet reptiles
Q30479743	Genetic relatedness among isolates of Shigella sonnei carrying class 2 integrons in Tehran, Iran, 2002-2003.
Q34565049	Genetic relatedness and host specificity of Pseudomonas aeruginosa isolates from cystic fibrosis and non-cystic fibrosis patients
Q40658158	Genetically Similar Isolates of Salmonella enterica Serotype Enteritidis Persistent in China for a Long-Term Period.
Q34457293	Genetically similar strains of Escherichia coli O157:H7 isolated from sheep, cattle and human patients
Q21267180	Genome sequencing reveals diversification of virulence factor content and possible host adaptation in distinct subpopulations of Salmonella enterica
Q37658340	Genomic analysis of Salmonella enterica serotype Paratyphi A during an outbreak in Cambodia, 2013-2015.
Q34983026	Genomic dissection of travel-associated extended-spectrum-beta-lactamase-producing Salmonella enterica serovar typhi isolates originating from the Philippines: a one-off occurrence or a threat to effective treatment of typhoid fever?
Q41671037	Genomic diversity and virulence profiles of historical Escherichia coli O157 strains isolated from clinical and environmental sources.
Q39510755	Genomic paradigms for food-borne enteric pathogen analysis at the USFDA: case studies highlighting method utility, integration and resolution
Q34516887	Genotypic analyses of shiga toxin-producing Escherichia coli O157 and non-O157 recovered from feces of domestic animals on rural farms in Mexico.
Q33398829	Genotypic characterization of non-O157 Shiga toxin-producing Escherichia coli in beef abattoirs of Argentina
Q40102483	Ground water as the source of an outbreak of Salmonella Enteritidis
Q44208124	Growth of Salmonella enterica in foliar pesticide solutions and its survival during field production and postharvest handling of fresh market tomato.
Q34251228	Heterogeneity of persistence of Salmonella enterica serotype Senftenberg strains could explain the emergence of this serotype in poultry flocks
Q53703841	High Prevalence of Intra-Familial Co-colonization by Extended-Spectrum Cephalosporin Resistant Enterobacteriaceae in Preschool Children and Their Parents in Dutch Households.
Q52665999	High diversity of genes and plasmids encoding resistance to third-generation cephalosporins and quinolones in clinical Escherichia coli from commercial poultry flocks in Italy.
Q40415709	High prevalence of fosfomycin resistance gene fosA3 in bla CTX-M-harbouring Escherichia coli from urine in a Chinese tertiary hospital during 2010-2014.
Q35843094	High prevalence of oxacillinases in clinical multidrug-resistant Acinetobacter baumannii isolates from the Tshwane region, South Africa - an update.
Q37191656	High-throughput molecular determination of salmonella enterica serovars by use of multiplex PCR and capillary electrophoresis analysis
Q58753972	Highly Prevalent Multidrug-Resistant From Chicken and Pork Meat at Retail Markets in Guangdong, China
Q36885584	Horizontal Acquisition of a Multidrug-Resistance Module (R-type ASSuT) Is Responsible for the Monophasic Phenotype in a Widespread Clone of Salmonella Serovar 4,[5],12:i:
Q37236331	Horizontal Transfer of the Salmonella enterica Serovar Infantis Resistance and Virulence Plasmid pESI to the Gut Microbiota of Warm-Blooded Hosts
Q35573418	Houseflies (Musca domestica) as Vectors for Extended-Spectrum β-Lactamase-Producing Escherichia coli on Spanish Broiler Farms
Q33588568	Household water treatment uptake during a public health response to a large typhoid fever outbreak in Harare, Zimbabwe
Q36034080	Human Salmonella and concurrent decreased susceptibility to quinolones and extended-spectrum cephalosporins
Q36276030	Human infections attributable to the D-tartrate-fermenting variant of Salmonella enterica serovar Paratyphi B in Germany originate in reptiles and, on rare occasions, poultry
Q34438992	Human infections due to Salmonella Blockley, a rare serotype in South Africa: a case report
Q21144549	Human leptospirosis caused by a new, antigenically unique Leptospira associated with a Rattus species reservoir in the Peruvian Amazon
Q57920780	Human-Associated Methicillin-Resistant Staphylococcus aureus from a Subtropical Recreational Marine Beach
Q88670063	Identification and Characterization of Conjugative Plasmids That Encode Ciprofloxacin Resistance in Salmonella
Q64137776	Identification and Characterization of Salmonella enterica Serotype Newport Isolates with Decreased Susceptibility to Ciprofloxacin in the United States
Q42794511	Identification and characterization of CTX-M-producing Shigella isolates in the United States
Q35385089	Identification and characterization of multidrug-resistant Salmonella enterica serotype Albert isolates in the United States
Q54391700	Identification of CTX-M15-, SHV-28-producing Klebsiella pneumoniae ST15 as an epidemic clone in the Copenhagen area using a semi-automated Rep-PCR typing assay.
Q84409101	Identity, virulence genes, and clonal relatedness of Aeromonas isolates from patients with diarrhea and drinking water
Q35664527	Impact of ceftiofur injection on gut microbiota and Escherichia coli resistance in pigs
Q90045203	Impact of cleaning and disinfection procedures on microbial ecology and Salmonella antimicrobial resistance in a pig slaughterhouse
Q35267914	Impact of compounding error on strategies for subtyping pathogenic bacteria
Q35941685	Impact of the administration of a third-generation cephalosporin (3GC) to one-day-old chicks on the persistence of 3GC-resistant Escherichia coli in intestinal flora: An in vivo experiment
Q35075032	Impact of the use of β-lactam antimicrobials on the emergence of Escherichia coli isolates resistant to cephalosporins under standard pig-rearing conditions.
Q34489587	Improved Identification of Epidemiologically Related Strains of Salmonella enterica by use of a Fusion Algorithm Based on Pulsed-Field Gel Electrophoresis and Multiple-Locus Variable-Number Tandem-Repeat Analysis
Q49923903	In vivo transfer and microevolution of avian native IncA/C2blaNDM-1-carrying plasmid pRH-1238 during a broiler chicken infection study
Q36571803	IncI1 Plasmids Carrying Various blaCTX-M Genes Contribute to Ceftriaxone Resistance in Salmonella enterica Serovar Enteritidis in China.
Q33313257	Incidence and tracking of Escherichia coli O157:H7 in a major produce production region in California
Q43098115	Increased detection of extended spectrum beta-lactamase producing Salmonella enterica and Escherichia coli isolates from poultry
Q40749109	Increased efficacy of inactivated vaccine candidates prepared with Salmonella enterica serovar Typhimurium strains of predominant genotypes in ducks
Q36288356	Increasing prevalence of ciprofloxacin-resistant food-borne Salmonella strains harboring multiple PMQR elements but not target gene mutations
Q64264892	Infantis in Broiler Flocks in Slovenia: The Prevalence of Multidrug Resistant Strains with High Genetic Homogeneity and Low Biofilm-Forming Ability
Q40567154	Influence of On-farm pig Salmonella status on Salmonella Shedding at Slaughter.
Q36757359	Influence of therapeutic ceftiofur treatments of feedlot cattle on fecal and hide prevalences of commensal Escherichia coli resistant to expanded-spectrum cephalosporins, and molecular characterization of resistant isolates
Q34881352	Infrequent cross-transmission of Shigella flexneri 2a strains among villages of a mountainous township in Taiwan with endemic shigellosis
Q35728498	Ingested Salmonella enterica, Cronobacter sakazakii, Escherichia coli O157:H7, and Listeria monocytogenes: transmission dynamics from adult house flies to their eggs and first filial (F1) generation adults
Q36944704	Integrated food chain surveillance system for Salmonella spp. in Mexico.
Q36238736	Integrated surveillance and potential sources of Salmonella enteritidis in human cases in Canada from 2003 to 2009
Q34447037	Integrating survey and molecular approaches to better understand wildlife disease ecology
Q33703618	Integrative analysis of Salmonellosis in Israel reveals association of Salmonella enterica Serovar 9,12:l,v:- with extraintestinal infections, dissemination of endemic S. enterica Serovar Typhimurium DT104 biotypes, and severe underreporting of outb
Q35654610	Integron, Plasmid and Host Strain Characteristics of Escherichia coli from Humans and Food Included in the Norwegian Antimicrobial Resistance Monitoring Programs
Q37643549	Intermediate susceptibility to ciprofloxacin among Salmonella enterica serovar Typhi isolates in Lima, Peru
Q53222840	International foodborne outbreak of Shigella sonnei infection in airline passengers.
Q39164319	International spread of an epidemic population of Salmonella enterica serotype Kentucky ST198 resistant to ciprofloxacin.
Q37334280	International spread of multidrug-resistant Salmonella Schwarzengrund in food products
Q37545897	Intimin gene (eae) subtype-based real-time PCR strategy for specific detection of Shiga toxin-producing Escherichia coli serotypes O157:H7, O26:H11, O103:H2, O111:H8, and O145:H28 in cattle feces.
Q44770831	Intrafamilial transmission of extended-spectrum-beta-lactamase-producing Escherichia coli and Salmonella enterica Babelsberg among the families of internationally adopted children
Q22251106	Invasive Escherichia coli are a feature of Crohn's disease
Q40328688	Invasive gastroenteritis, anything new?
Q94599260	Investigation of a salmonellosis outbreak linked to French toast sandwich with the use of surveillance camera, Taiwan, 2018
Q43230354	Is Escherichia coli urinary tract infection a zoonosis? Proof of direct link with production animals and meat
Q37120155	Isolation and Characterization of Escherichia coli Sequence Type 131 and Other Antimicrobial-Resistant Gram-Negative Bacilli from Clinical Stool Samples from Veterans
Q34217373	Isolation and characterization of cytotoxic, aggregative Citrobacter freundii
Q46981309	Isolation of Salmonella Virchow from a fruit bat (Pteropus giganteus).
Q50072174	Isolation of Salmonella typhimurium from outbreak-associated cake mix.
Q36505307	KPC-4 Is encoded within a truncated Tn4401 in an IncL/M plasmid, pNE1280, isolated from Enterobacter cloacae and Serratia marcescens
Q36233235	Laboratory Investigation of Salmonella enterica serovar Poona Outbreak in California: Comparison of Pulsed-Field Gel Electrophoresis (PFGE) and Whole Genome Sequencing (WGS) Results
Q92997161	Laboratory Review of Foodborne Disease Investigations in Washington State 2007-2017
Q36434395	Laboratory-Acquired Infection with Salmonella enterica Serovar Typhimurium Exposed by Whole-Genome Sequencing
Q42145612	Laboratory-acquired infections of Salmonella enterica serotype Typhi in South Africa: phenotypic and genotypic analysis of isolates
Q35071188	Laboratory-based prospective surveillance for community outbreaks of Shigella spp. in Argentina
Q40101350	Laboratory-based surveillance of paratyphoid fever in the United States: travel and antimicrobial resistance
Q36558686	Landscape and meteorological factors affecting prevalence of three food-borne pathogens in fruit and vegetable farms
Q37631515	Laser optical sensor, a label-free on-plate Salmonella enterica colony detection tool
Q59329714	Listeriosis in fattening pigs caused by poor quality silage - a case report
Q35628250	Long-Term Care Facilities Are Reservoirs for Antimicrobial-Resistant Sequence Type 131 Escherichia coli
Q50023642	Longitudinal dissemination of Salmonella enterica clonal groups through the slaughter process of Salmonella-positive pig batches.
Q37123059	Longitudinal study of distributions of similar antimicrobial-resistant Salmonella serovars in pigs and their environment in two distinct swine production systems
Q92603257	Longitudinal study reveals persistent environmental Salmonella Heidelberg in Brazilian broiler farms
Q43351749	Low Concentration of Salmonella enterica and Generic Escherichia coli in Farm Ponds and Irrigation Distribution Systems Used for Mixed Produce Production in Southern Georgia.
Q43751467	MLVA is a valuable tool in epidemiological investigations of Escherichia coli and for disclosing multiple carriage
Q34630359	Meta-analysis of pulsed-field gel electrophoresis fingerprints based on a constructed Salmonella database
Q47397990	MgrB Alterations Mediate Colistin Resistance in Klebsiella pneumoniae Isolates from Iran
Q33553937	Microbial quality of agricultural water in Central Florida
Q37600172	Microbiological and Genetic Characterization of Carbapenem-Resistant Klebsiella pneumoniae Isolated From Pediatric Patients
Q37355030	Molecular Characterization of Salmonella Serovars Anatum and Ealing Associated with Two Historical Outbreaks, Linked to Contaminated Powdered Infant Formula
Q36110394	Molecular Characterization of Salmonella enterica Serovar Aberdeen Negative for H2S Production in China
Q36022314	Molecular Characterization of Shigella sonnei: An Increasingly Prevalent Etiologic Agent of Shigellosis in Guizhou Province, Southwest of China
Q90707404	Molecular Epidemiology of Infectious Zoonotic and Livestock Diseases
Q37355116	Molecular Epidemiology of Multi-Drug Resistant Acinetobacter baumannii Isolated in Shandong, China
Q34100427	Molecular Typing of Mycobacterium intracellulare Using Pulsed-Field Gel Electrophoresis, Variable-Number Tandem-Repeat Analysis, Mycobacteria Interspersed Repetitive-Unit-Variable-Number Tandem Repeat Typing, and Multilocus Sequence Typing: Molecula
Q35267870	Molecular analysis of antimicrobial-susceptible and -resistant Escherichia coli from retail meats and human stool and clinical specimens in a rural community setting
Q49387435	Molecular analysis of multidrug resistance in clinical isolates of Shigella spp. from 2001-2010 in Kolkata, India: role of integrons, plasmids, and topoisomerase mutations
Q35739062	Molecular and cellular characterization of a Salmonella enterica serovar Paratyphi a outbreak strain and the human immune response to infection
Q33943842	Molecular and comparative analysis of Salmonella enterica Senftenberg from humans and animals using PFGE, MLST and NARMS
Q40262754	Molecular characterisation of Salmonella strains isolated from outbreaks and sporadic cases of diarrhoea occurred in Paraná State, South of Brazil.
Q48587923	Molecular characterisation of human Shiga toxin-producing Escherichia coli O26 strains: results of an outbreak investigation, Romania, February to August 2016.
Q40622195	Molecular characterization and antimicrobial resistance of STEC strains isolated from healthy cattle in 2011 and 2013 in Spain.
Q37099516	Molecular characterization and antimicrobial susceptibility of Salmonella isolates from infections in humans in Henan Province, China
Q35140054	Molecular characterization and antimicrobial susceptibility testing of Escherichia coli isolates from patients with urinary tract infections in 20 Chinese hospitals
Q33859072	Molecular characterization of Klebsiella pneumoniae isolates from stool specimens of outpatients in sentinel hospitals Beijing, China, 2010-2015
Q41084832	Molecular characterization of Salmonella enterica isolates associated with starling-livestock interactions
Q35593730	Molecular characterization of Salmonella paratyphi B dT+ and Salmonella Heidelberg from poultry and retail chicken meat in Colombia by pulsed-field gel electrophoresis
Q34339475	Molecular characterization of enterohemorrhagic Escherichia coli isolates from cattle
Q33704807	Molecular characterization of extended-spectrum cephalosporinase-producing Salmonella enterica serovar Choleraesuis isolates from patients in Thailand and Denmark
Q85634678	Molecular characterization of the extended-spectrum beta-lactamase (ESBL)-producing Shigella spp. in Shanghai
Q34656941	Molecular clonality and antimicrobial resistance in Salmonella enterica serovars Enteritidis and Infantis from broilers in three Northern regions of Iran
Q24633808	Molecular dissection of an outbreak of carbapenem-resistant enterobacteriaceae reveals Intergenus KPC carbapenemase transmission through a promiscuous plasmid
Q35941378	Molecular epidemiological analysis of Escherichia coli sequence type ST131 (O25:H4) and blaCTX-M-15 among extended-spectrum-β-lactamase-producing E. coli from the United States, 2000 to 2009.
Q40347709	Molecular epidemiological investigation of a typhoid fever outbreak in South Africa, 2005: the relationship to a previous epidemic in 1993
Q92005945	Molecular epidemiology and antibiotic resistance of Burkholderia pseudomallei isolates from Hainan, China: A STROBE compliant observational study
Q36405521	Molecular epidemiology and characterization of multiple drug-resistant (MDR) clinical isolates of Acinetobacter baumannii
Q37409886	Molecular epidemiology of CTX-M-producing Escherichia coli isolates at a tertiary medical center in western Pennsylvania.
Q36423625	Molecular epidemiology of Escherichia coli producing extended-spectrum beta-lactamases isolated in Rome, Italy
Q46280795	Molecular epidemiology of Salmonella enterica serovar Kottbus isolated in Germany from humans, food and animals
Q34315040	Molecular epidemiology of extended-spectrum β-lactamase-producing Escherichia coli in the community and hospital in Korea: emergence of ST131 producing CTX-M-15.
Q38915105	Molecular epidemiology of microorganisms isolated from food workers and enteral feeding of public hospitals
Q36702136	Molecular evidence of Burkholderia pseudomallei genotypes based on geographical distribution.
Q38162459	Molecular methods for serovar determination of Salmonella
Q40382000	Molecular tracking of Salmonella spp. in chicken meat chain: from slaughterhouse reception to end cuts
Q35754304	Molecular typing in public health laboratories: from an academic indulgence to an infection control imperative.
Q33338974	Multi-locus variable-number tandem repeat analysis for outbreak studies of Salmonella enterica serotype Enteritidis
Q36112333	Multidrug resistant Pseudomonas aeruginosa survey in a stream receiving effluents from ineffective wastewater hospital plants.
Q53692978	Multidrug resistant Salmonella enterica isolated from conventional pig farms using antimicrobial agents in preventative medicine programmes.
Q64072910	Multidrug-Resistant Bovine Salmonellosis Predisposing for Severe Human Clostridial Myonecrosis
Q38793850	Multidrug-Resistant Outbreak-Associated Salmonella Strains in Irrigation Water from the Metropolitan Region, Chile
Q92717458	Multidrug-Resistant Salmonella enterica Serovar Rissen Clusters Detected in Azores Archipelago, Portugal
Q37021016	Multidrug-resistant atypical variants of Shigella flexneri in China
Q40501594	Multidrug-resistant pathogenic Escherichia coli isolated from wild birds in a veterinary hospital
Q40295408	Multidrug-resistant typhoid fever with neurologic findings on the Malawi-Mozambique border
Q38991233	Multilocus genotypic characterization of Escherichia coli O157:H7 recovered from food sources.
Q33521392	Multilocus variable-number tandem repeat analysis for molecular typing and phylogenetic analysis of Shigella flexneri
Q33559482	Multilocus variable-number tandem-repeat analysis and plasmid profiling to study the occurrence of blaCMY-2 within a pulsed-field gel electrophoresis-defined clade of Salmonella enterica serovar Typhimurium
Q36314379	Multilocus variable-number tandem-repeat analysis for molecular typing of Shigella sonnei
Q50034377	Multilocus variable-number tandem-repeat analysis for subtyping Salmonella enterica serovar Gallinarum
Q33829308	Multilocus variable-number tandem-repeat analysis, pulsed-field gel electrophoresis, and antimicrobial susceptibility patterns in discrimination of sporadic and outbreak-related strains of Yersinia enterocolitica
Q37214155	Multilocus variable-number tandem-repeat method for typing Salmonella enterica serovar Newport
Q40717574	Multiple-locus variable-number tandem repeat analysis for strain discrimination of non-O157 Shiga toxin-producing Escherichia coli.
Q42228912	Multiple-locus variable-number tandem repeat analysis of Salmonella enterica subsp. enterica serovar Dublin.
Q30229480	Multiplex, bead-based suspension array for molecular determination of common Salmonella serogroups
Q40508572	Multistate Outbreak of Human Salmonella Typhimurium Infections Linked to Pet Hedgehogs - United States, 2011-2013.
Q58057326	Multistate outbreak of Escherichia coli O157:H7 infections associated with a national fast-food chain, 2006: a study incorporating epidemiological and food source traceback results
Q43350308	Multistate outbreak of Escherichia coli O157:H7 infections associated with in-store sampling of an aged raw-milk Gouda cheese, 2010.
Q90067018	Multistate outbreak of Salmonella Poona infections associated with imported cucumbers, 2015-2016
Q33718242	Multistate outbreak of human Salmonella Typhimurium infections linked to live poultry from agricultural feed stores and mail-order hatcheries, United States 2013
Q36807215	Nationwide outbreak of Salmonella Montevideo infections associated with contaminated imported black and red pepper: warehouse membership cards provide critical clues to identify the source
Q44074778	Naturally colonized beef cattle populations fed combinations of yeast culture and an ionophore in finishing diets containing dried distiller's grains with solubles had similar fecal shedding of Escherichia coli O157:H7.
Q60922553	New Multidrug-Resistant Salmonella enterica Serovar Anatum Clone, Taiwan, 2015-2017
Q92212710	Non-clonal occurrence of pmrB mutations associated with polymyxin resistance in carbapenem-resistant Klebsiella pneumoniae in Brazil
Q36018107	Norwegian sheep are an important reservoir for human-pathogenic Escherichia coli O26:H11.
Q41294943	Nosocomial Intravascular Catheter Infections with Extended-spectrum Beta-lactamase-producing Escherichia coli in Calves after Strain Introduction from a Commercial Herd
Q37546283	Nosocomial outbreak of Salmonella enterica serovar Typhimurium primarily affecting a pediatric ward in South Africa in 2012.
Q42283490	Nosocomial transmission of New Delhi metallo-β-lactamase-1-producing Klebsiella pneumoniae in Toronto, Canada
Q42059289	Novel genetic tools for studying food-borne Salmonella
Q37190813	Novel plasmid-encoded ceftazidime-hydrolyzing CTX-M-53 extended-spectrum beta-lactamase from Salmonella enterica serotypes Westhampton and Senftenberg.
Q42706470	Novel virulence gene and clustered regularly interspaced short palindromic repeat (CRISPR) multilocus sequence typing scheme for subtyping of the major serovars of Salmonella enterica subsp. enterica
Q54205809	Occurrence and characterisation of ESBL-encoding plasmids among Escherichia coli isolates from fresh vegetables.
Q58573037	Occurrence of Bacterial Pathogens and Human Noroviruses in Shellfish-Harvesting Areas and Their Catchments in France
Q37572452	Occurrence of Hybrid Escherichia coli Strains Carrying Shiga Toxin and Heat-Stable Toxin in Livestock of Bangladesh
Q41431373	Occurrence of pathogenicYersinia enterocoliticaandYersinia pseudotuberculosisin small wild rodents
Q54243354	Occurrence of virulence genes, 16S rRNA methylases, and plasmid-mediated quinolone resistance genes in CTX-M-producing Escherichia coli from Pakistan.
Q50046101	Optical genetic mapping defines regions of chromosomal variation in serovars of S. enterica subsp. enterica of concern for human and animal health
Q37072473	Optimization of pulse-field gel electrophoresis for subtyping of Klebsiella pneumoniae
Q40144753	Outbreak of CTX-M-15-Producing Enterotoxigenic Escherichia coli O159:H20 in the Republic of Korea in 2016.
Q40479306	Outbreak of KPC-3-producing ST15 and ST348 Klebsiella pneumoniae in a Portuguese hospital.
Q38911966	Outbreak of Salmonella Strathcona caused by datterino tomatoes, Denmark, 2011.
Q38126635	Outbreak of Salmonella enterica serotype I 4,5,12:i:- infections: the challenges of hypothesis generation and microwave cooking
Q41241174	Outbreak of Salmonella enterica serovar Typhimurium phage type DT41 in Danish poultry production
Q33405756	Outbreak of Shiga toxin-producing Escherichia coli (STEC) O157:H7 associated with romaine lettuce consumption, 2011
Q36971226	Outbreak of a cluster with epidemic behavior due to Serratia marcescens after colistin administration in a hospital setting
Q34298437	Outbreak of carbapenem-resistant enterobacteriaceae at a long-term acute care hospital: sustained reductions in transmission through active surveillance and targeted interventions
Q35647996	Outbreak of uncommon O4 non-agglutinating Salmonella typhimurium linked to minced pork, Saxony-Anhalt, Germany, January to April 2013
Q36303284	Outbreaks of Salmonella infections attributed to beef --United States, 1973-2011.
Q46169105	Outbreaks of Shigella sonnei infections in Denmark and Australia linked to consumption of imported raw baby corn
Q50058583	Outbreaks of salmonellosis in Minnesota (1998 through 2006) associated with frozen, microwaveable, breaded, stuffed chicken products
Q64118697	Paediatric haemolytic uraemic syndrome related to Shiga toxin-producing , an overview of 10 years of surveillance in France, 2007 to 2016
Q30402852	Pandemic extra-intestinal pathogenic Escherichia coli (ExPEC) clonal group O6-B2-ST73 as a cause of avian colibacillosis in Brazil.
Q35910491	Pathogenesis of Y. enterocolitica and Y. pseudotuberculosis in Human Yersiniosis
Q64075414	Pathogenic potential and the role of clones and plasmids in beta-lactamase-producing E. coli from chicken faeces in Vietnam
Q33798438	Pediatric infection and intestinal carriage due to extended-spectrum-cephalosporin-resistant Enterobacteriaceae
Q36676369	Persistent Infections by Nontyphoidal Salmonella in Humans: Epidemiology and Genetics.
Q41666929	Phenotypic and Genotypic Characterization of Salmonella enterica in Captive Wildlife and Exotic Animal Species in Ohio, USA.
Q82237328	Phenotypic and genotypic characterization of β-lactam resistance in Klebsiella pneumoniae isolated from swine
Q49936697	Phenotypic and genotypic profile of clinical and animal multidrug-resistant Salmonella enterica isolates from Mexico.
Q44758433	Phenotypic traits, virulence-associated gene profile and genetic relatedness of Edwardsiella tarda isolates from Japanese eel Anguilla japonica in Korea
Q46292321	Phylogenetic Backgrounds and Virulence-Associated Traits of Escherichia coli Isolates from Surface Waters and Diverse Animals in Minnesota and Wisconsin
Q37282954	Phylogenetic classification of Escherichia coli O157:H7 strains of human and bovine origin using a novel set of nucleotide polymorphisms
Q36126701	Phylogeny of Shiga toxin-producing Escherichia coli O157 isolated from cattle and clinically ill humans
Q41991775	Phylogroup and virulence gene association with clinical characteristics of Escherichia coli urinary tract infections from dogs and cats
Q35998413	Plasmid and Host Strain Characteristics of Escherichia coli Resistant to Extended-Spectrum Cephalosporins in the Norwegian Broiler Production.
Q56561842	Plasmid-mediated quinolone resistance in human non-typhoidal Salmonella infections: An emerging public health problem in the United States
Q42946673	Plasmid-mediated streptomycin and sulfamethoxazole resistance in Shigella flexneri 3a
Q28538578	Plasmid-mediated sulfamethoxazole resistance encoded by the sul2 gene in the multidrug-resistant Shigella flexneri 2a isolated from patients with acute diarrhea in Dhaka, Bangladesh
Q37334357	Polymorphic Amplified Typing Sequences (PATS) Strain Typing System Accurately Discriminates a Set of Temporally and Spatially Disparate Escherichia coli O157 Isolates Associated with Human Infection
Q36288461	Polymorphic Amplified Typing Sequences and Pulsed-Field Gel Electrophoresis Yield Comparable Results in the Strain Typing of a Diverse Set of Bovine Escherichia coli O157:H7 Isolates
Q37122999	Population structure of Salmonella enterica serovar 4,[5],12:b:- strains and likely sources of human infection
Q34057927	Population structure, virulence potential and antibiotic susceptibility of uropathogenic Escherichia coli from Northwest England.
Q33983416	Pork contaminated with Salmonella enterica serovar 4,[5],12:i:-, an emerging health risk for humans
Q28550906	Potential Sources and Transmission of Salmonella and Antimicrobial Resistance in Kampala, Uganda
Q35138885	Potentially human-pathogenic Escherichia coli O26 in Norwegian sheep flocks
Q48026219	Potentially pathogenic Escherichia coli in healthy, pasture-raised sheep on farms and at the abattoir in Brazil
Q37099352	Poultry-associated Salmonella enterica subsp. enterica serovar 4,12:d:- reveals high clonality and a distinct pathogenicity gene repertoire
Q40819464	Prevalence and Characteristics of Enterotoxin B-Producing Staphylococcus aureus Isolated from Food Sources: A Particular Cluster of ST188 Strains was Identified.
Q40140785	Prevalence and Characteristics of Salmonella Serotypes Isolated from Fresh Produce Marketed in the United States
Q55502634	Prevalence and Characterization of Staphylococcus aureus Cultured From Raw Milk Taken From Dairy Cows With Mastitis in Beijing, China.
Q45926959	Prevalence and antimicrobial resistance of Salmonella serovars in conventional and organic chickens from Louisiana retail stores.
Q40687076	Prevalence and antimicrobial resistance of Salmonella serovars isolated from poultry in Ghana.
Q34258550	Prevalence and characteristics of Shiga toxin-producing Escherichia coli (STEC) from cattle in Korea between 2010 and 2011.
Q37026380	Prevalence and characteristics of the epidemic multiresistant Escherichia coli ST131 clonal group among extended-spectrum beta-lactamase-producing E. coli isolates in Copenhagen, Denmark
Q34550027	Prevalence and characterization of Escherichia coli and Salmonella strains isolated from stray dog and coyote feces in a major leafy greens production region at the United States-Mexico border
Q37635254	Prevalence and characterization of Salmonella among humans in Ghana
Q48162119	Prevalence and characterization of Salmonella in two integrated broiler operations in Korea.
Q34487453	Prevalence and characterization of human Shigella infections in Henan Province, China, in 2006.
Q39831113	Prevalence and characterization of multi-drug resistant Salmonella Enterica serovar Gallinarum biovar Pullorum and Gallinarum from chicken.
Q50016432	Prevalence and characterization of plasmid-mediated quinolone resistance genes in Salmonella isolated from poultry in Korea
Q44984479	Prevalence and concentration of Salmonella on raw shelled peanuts in the United States
Q46877247	Prevalence and counts of Salmonella and enterohemorrhagic Escherichia coli in raw, shelled runner peanuts
Q36897978	Prevalence and genetic characterization of shiga toxin-producing Escherichia coli isolates from slaughtered animals in Bangladesh
Q46027107	Prevalence and molecular characterization of Escherichia coli O157:H7 by multiple-locus variable-number tandem repeat analysis and pulsed-field gel electrophoresis in three sheep farming operations in California.
Q40604785	Prevalence and molecular characterization of Salmonella enterica isolates throughout an integrated broiler supply chain in China
Q36970605	Prevalence and relatedness of Escherichia coli O157:H7 strains in the feces and on the hides and carcasses of U.S. meat goats at slaughter
Q39375018	Prevalence and spread of multidrug-resistant Escherichia coli including ST131 in different patient populations in the Euroregion Meuse-Rhine
Q35864240	Prevalence of Salmonella Isolates from Chicken and Pig Slaughterhouses and Emergence of Ciprofloxacin and Cefotaxime Co-Resistant S. enterica Serovar Indiana in Henan, China
Q44525754	Prevalence of antibiotic-resistant bacteria in residents of nursing homes in a Swedish municipality: healthcare staff knowledge of and adherence to principles of basic infection prevention
Q64120923	Prevalence of antimicrobial resistance and potential pathogenicity, and possible spread of third generation cephalosporin resistance, in Escherichia coli isolated from healthy chicken farms in the region of Dakar, Senegal
Q41062050	Prevalence of carbapenemase producing Enterobacteriaceae isolated from German pig-fattening farms during the years 2011-2013.
Q35023978	Prevalence of carriage of Shiga toxin-producing Escherichia coli serotypes O157:H7, O26:H11, O103:H2, O111:H8, and O145:H28 among slaughtered adult cattle in France
Q37614663	Prevalence of shiga toxin producing Escherichia coli, Salmonella enterica, and Listeria monocytogenes at public access watershed sites in a California Central Coast agricultural region
Q38409370	Prevalence, Level, and Types of Salmonella Isolated from North American In-Shell Pecans over Four Harvest Years
Q54355174	Prevalence, characterization, and antimicrobial resistance of Aeromonas strains from various retail food products in Mumbai, India.
Q46891107	Prevalence, concentrations, and antibiotic sensitivities of Salmonella serovars in poultry from retail establishments in Seattle, Washington
Q35077153	Prevalence, distribution, and diversity of Salmonella enterica in a major produce region of California.
Q36086404	Prominence of an O75 clonal group (clonal complex 14) among non-ST131 fluoroquinolone-resistant Escherichia coli causing extraintestinal infections in humans and dogs in Australia
Q96354435	Prospective Salmonella Enteritidis Surveillance and Outbreak Detection using Whole Genome Sequencing, Minnesota 2015-2017
Q54374054	Public health approach to detection of non-O157 Shiga toxin-producing Escherichia coli: summary of two outbreaks and laboratory procedures.
Q35073230	Pulmonary cholera due to infection with a non-O1 Vibrio cholerae strain
Q92871769	PulseNet Lebanon: An Overview of Its Activities, Outbreak Investigations, and Challenges
Q93039504	PulseNet: Entering the Age of Next-Generation Sequencing
Q34130232	Pulsed field gel electrophoresis: A review of application and interpretation in the molecular epidemiology of infectious disease
Q35093176	Pulsed-field gel electrophoresis diversity of human and bovine clinical Salmonella isolates.
Q38954407	Pulsed-field gel electrophoresis supports the presence of host-adapted Salmonella enterica subsp. enterica serovar Typhimurium strains in the British garden bird population.
Q50046345	Qualitative map of Salmonella contamination on young chicken carcasses
Q91760632	Rapid Emergence, Subsidence, and Molecular Detection of Escherichia coli Sequence Type 1193-fimH64, a New Disseminated Multidrug-Resistant Commensal and Extraintestinal Pathogen
Q37713679	Rapid and specific detection, molecular epidemiology, and experimental virulence of the O16 subgroup within Escherichia coli sequence type 131.
Q33950950	Rapid whole-genome sequencing for surveillance of Salmonella enterica serovar enteritidis
Q41194839	Rare Spontaneous Loss of Multiresistance Gene Carrying IncI/ST12 Plasmid in Escherichia coli in Pig Microbiota.
Q50045196	Re-emergence of multi-drug resistant Salmonella enterica serovar Stanley from cattle
Q37713782	Real-time whole-genome sequencing for routine typing, surveillance, and outbreak detection of verotoxigenic Escherichia coli
Q41374810	Reappearance of Salmonella serovar Choleraesuis var. Kunzendorf in Danish pig herds
Q26753033	Recent and emerging innovations in Salmonella detection: a food and environmental perspective
Q47098000	Recovery of Salmonella isolated from eggs and the commercial layer farms
Q33428943	Recurrent Hemolytic and Uremic Syndrome Induced by Escherichia Coli
Q41641099	Reduction of subclinical Salmonella infection in fattening pigs after dietary supplementation with a ß-galactomannan oligosaccharide.
Q41634727	Repeated isolation of Salmonella enterica Goverdhan, a very rare serovar, from Danish poultry surveillance samples
Q37175327	Resistance genes, phage types and pulsed field gel electrophoresis pulsotypes in Salmonella enterica strains from laying hen farms in southern Italy
Q41006900	Resistance-Gene Cassettes Associated With Salmonella enterica Genotypes
Q50052247	Restaurant Salmonella Enteritidis outbreak associated with an asymptomatic infected food worker
Q52595196	Retrospective Analysis of Bacterial Cultures Sampled in German Chicken-Fattening Farms During the Years 2011-2012 Revealed Additional VIM-1 Carbapenemase-Producing Escherichia coli and a Serologically Rough Salmonella enterica Serovar Infantis.
Q43586058	Role of pathogen surveillance and subtyping in outbreak recognition of food-borne bacterial infections. Microbiological perspective - Aims, methods and prospects of pathogen subtyping
Q37306870	Role of subtyping in detecting Salmonella cross contamination in the laboratory
Q57429345	Routes of transmission ofSalmonellaandCampylobacterin breeder turkeys
Q34984754	Salmonella Cerro isolated over the past twenty years from various sources in the US represent a single predominant pulsed-field gel electrophoresis type
Q49114614	Salmonella Gallinarum field isolates from laying hens are related to the vaccine strain SG9R.
Q40336591	Salmonella Levels in Turkey Neck Skins, Drumstick Bones, and Spleens in Relation to Ground Turkey
Q42274263	Salmonella Oranienburg isolated from horses, wild turkeys and an edible home garden fertilized with raw horse manure
Q45106637	Salmonella Virchow isolates from human and avian origins in England--molecular characterization and infection of epithelial cells and poultry
Q50039429	Salmonella carriage in adopted children from Mali: 2001-08.
Q36970377	Salmonella enterica diversity in central Californian coastal waterways.
Q42070065	Salmonella enterica in commercial swine feed and subsequent isolation of phenotypically and genotypically related strains from fecal samples
Q42932685	Salmonella enterica isolates from pasture-raised poultry exhibit antimicrobial resistance and class I integrons
Q35804910	Salmonella enterica pulsed-field gel electrophoresis clusters, Minnesota, USA, 2001-2007
Q37410458	Salmonella enterica serotype 4,5,12:i:-, an emerging Salmonella serotype that represents multiple distinct clones
Q35093188	Salmonella enterica serotype Cerro among dairy cattle in New York: an emerging pathogen?
Q36558994	Salmonella enterica serovar Typhi variants in long-term carriers
Q50043437	Salmonella enterica strains belonging to O serogroup 1,3,19 induce chlorosis and wilting of Arabidopsis thaliana leaves
Q35132458	Salmonella enterica subclinical infection: bacteriological, serological, pulsed-field gel electrophoresis, and antimicrobial resistance profiles--longitudinal study in a three-site farrow-to-finish farm
Q46016389	Salmonella enterica subsp. enterica isolated from chicken carcasses and environment at slaughter in Reunion Island: prevalence, genetic characterization and antibiotic susceptibility.
Q37338755	Salmonella in Wild Birds Utilizing Protected and Human Impacted Habitats, Uganda
Q40832887	Salmonella infection in grey seals (Halichoerus grypus), a marine mammal sentinel species: pathogenicity and molecular typing of Salmonella strains compared with human and livestock isolates
Q40075786	Salmonella serotype diversity and seasonality in urban and rural streams
Q42112113	Salmonella serovar identification using PCR-based detection of gene presence and absence
Q28485199	Salmonella typhi in the democratic republic of the congo: fluoroquinolone decreased susceptibility on the rise
Q47154045	Scientific Opinion on the evaluation of molecular typing methods for major food‐borne microbiological hazards and their use for attribution modelling, outbreak investigation and scanning surveillance: Part 1 (evaluation of methods and applications)
Q47150482	Scientific Opinion on the public health risks of bacterial strains producing extended-spectrum β-lactamases and/or AmpC β-lactamases in food and food-producing animals
Q43357306	Search and you will find: detecting extended-spectrum β-lactamase-producing Klebsiella pneumoniae from a patient's immediate environment.
Q42038888	Selection and validation of a multilocus variable-number tandem-repeat analysis panel for typing Shigella spp.
Q40362326	Selection of broad-spectrum cephalosporin-resistant Escherichia coli in the feces of healthy dogs after administration of first-generation cephalosporins
Q33826135	Sequence analysis and characterization of a transferable hybrid plasmid encoding multidrug resistance and enabling zoonotic potential for extraintestinal Escherichia coli
Q49998289	Sequence analysis of a CTX-M-1 IncI1 plasmid found in Salmonella 4,5,12:i:-, Escherichia coli and Klebsiella pneumoniae on a UK pig farm
Q64121662	Serotype Panama: An exceptionally virulent cause of illness in children?
Q93059684	Serotype, antimicrobial susceptibility and genotype profiles of Salmonella isolated from duck farms and a slaughterhouse in Shandong province, China
Q33807691	Serovar distribution, antimicrobial resistance profiles, and PFGE typing of Salmonella enterica strains isolated from 2007-2012 in Guangdong, China
Q42613485	Sharing of Escherichia coli sequence type ST131 and other multidrug-resistant and Urovirulent E. coli strains among dogs and cats within a household
Q35113254	Shifts in geographic distribution and antimicrobial resistance during a prolonged typhoid fever outbreak--Bundibugyo and Kasese Districts, Uganda, 2009-2011.
Q44018600	Shiga Toxin-Producing E. coli Infections Associated with Flour
Q47102102	Shiga Toxin-Producing Escherichia coli O157 Shedding Dynamics in an Australian Beef Herd
Q64942838	Shigatoxigenic and atypical enteropathogenic Escherichia coli in fish for human consumption.
Q36212061	Shigella Infections in Household Contacts of Pediatric Shigellosis Patients in Rural Bangladesh
Q33577134	Shigella spp. with reduced azithromycin susceptibility, Quebec, Canada, 2012-2013
Q36413968	Similarity and divergence of phylogenies, antimicrobial susceptibilities, and virulence factor profiles of Escherichia coli isolates causing recurrent urinary tract infections that persist or result from reinfection
Q34487636	Simultaneous analysis of multiple enzymes increases accuracy of pulsed-field gel electrophoresis in assigning genetic relationships among homogeneous Salmonella strains
Q35114065	Simultaneous infections by different Salmonella strains in mesenteric lymph nodes of finishing pigs.
Q34978239	Simultaneously sizing and quantitating zeptomole-level DNA at high throughput in free solution
Q34028874	Single nucleotide polymorphisms that differentiate two subpopulations of Salmonella enteritidis within phage type
Q57027383	Sink traps as the source of transmission of OXA-48-producing Serratia marcescens in an intensive care unit
Q40208472	Sites of colonization in hospitalized patients with infections caused by extended-spectrum beta-lactamase organisms: a prospective cohort study.
Q47553381	Social network community structure and the contact-mediated sharing of commensal E. coli among captive rhesus macaques (Macaca mulatta).
Q38409365	Spatiotemporal Analysis of Microbiological Contamination in New York State Produce Fields following Extensive Flooding from Hurricane Irene, August 2011.
Q104611955	Spread of tet(X5) and tet(X6) genes in multidrug-resistant Acinetobacter baumannii strains of animal origin
Q34594416	Strain diversity of CTX-M-producing Enterobacteriaceae in individual pigs: insights into the dynamics of shedding during the production cycle
Q33773274	Strong influence of livestock environments on the emergence and dissemination of distinct multidrug-resistant phenotypes among the population of non-typhoidal Salmonella
Q33723659	Subtype analysis of Salmonella isolated from subclinically infected dairy cattle and dairy farm environments reveals the presence of both human- and bovine-associated subtypes
Q36971179	Subtyping of Salmonella enterica serovar Newport outbreak isolates by CRISPR-MVLST and determination of the relationship between CRISPR-MVLST and PFGE results
Q40586368	Successful Treatment of Urinary Tract Infection in Kidney Transplant Recipients Caused by Multiresistant Klebsiella pneumoniae Producing New Delhi Metallo-Beta-Lactamase (NDM-1) With Strains Genotyping.
Q90186575	Surveillance of Salmonella enterica serovar Typhi in Colombia, 2012-2015
Q43230533	Surveillance of verocytotoxigenic Escherichia coli in Irish bovine dairy herds
Q46116423	Survival of Salmonella, Escherichia coli O157:H7, and Listeria monocytogenes on inoculated almonds and pistachios stored at -19, 4, and 24° C.
Q34596717	Temporal trends in antimicrobial resistance and virulence-associated traits within the Escherichia coli sequence type 131 clonal group and its H30 and H30-Rx subclones, 1968 to 2012.
Q64044095	The Burden of Typhoid Fever in South Africa: The Potential Impact of Selected Interventions
Q34001997	The O28 Antigen Gene Clusters of Salmonella enterica subsp. enterica Serovar Dakar and Serovar Pomona Are Different
Q46271218	The Possible Influence of Non-synonymous Point Mutations within the FimA Adhesin of Non-typhoidal Salmonella (NTS) Isolates in the Process of Host Adaptation
Q90338753	The Washing Machine as a Reservoir for Transmission of Extended-Spectrum-Beta-Lactamase (CTX-M-15)-Producing Klebsiella oxytoca ST201 to Newborns
Q34157129	The characterization and antibiotic resistance profiles of clinical Escherichia coli O25b-B2-ST131 isolates in Kuwait
Q39038982	The characterization of Salmonella enterica serotypes isolated from the scalder tank water of a commercial poultry processing plant: Recovery of a multidrug-resistant Heidelberg strain.
Q35106840	The core proteome and pan proteome of Salmonella Paratyphi A epidemic strains
Q35799490	The emergence of plasmid mediated quinolone resistance qnrA2 in extended spectrum β-lactamase producing Klebsiella pneumoniae in the Middle East
Q36517569	The evaluation and application of multilocus variable number tandem repeat analysis (MLVA) for the molecular epidemiological study of Salmonella enterica subsp. enterica serovar Enteritidis infection
Q38753453	The genomic signatures of Shigella evolution, adaptation and geographical spread
Q35819659	The molecular characterisation of Escherichia coli K1 isolated from neonatal nasogastric feeding tubes
Q47168052	The occurrence of CTX-M-25-producing Enterobacteriaceae in day-old broiler chicks in Japan
Q34108925	The prevalence of multidrug resistance is higher among bovine than human Salmonella enterica serotype Newport, Typhimurium, and 4,5,12:i:- isolates in the United States but differs by serotype and geographic region
Q33758414	The role, challenges, and support of pulsenet laboratories in detecting foodborne disease outbreaks
Q39851369	The trend of enteropathogenic Escherichia coli towards atypical multidrug resistant genotypes.
Q36314309	Tracing shigatoxigenic Escherichia coli O103, O145, and O174 infections from farm residents to cattle
Q41359716	Transfer of Escherichia coli O157:H7 from simulated wildlife scat onto romaine lettuce during foliar irrigation
Q36934556	Transfer of antimicrobial resistance plasmids from Klebsiella pneumoniae to Escherichia coli in the mouse intestine
Q35093179	Transmission dynamics of a multidrug-resistant Salmonella typhimurium outbreak in a dairy farm
Q52875345	Transmission of ESBL/AmpC-producing Escherichia coli from broiler chicken farms to surrounding areas.
Q45737160	Trimethoprim and ciprofloxacin resistance and prescribing in urinary tract infection associated with Escherichia coli: a multilevel model
Q41566195	Turtles as a Possible Reservoir of Nontyphoidal Salmonella in Shanghai, China
Q33698069	Two consecutive large outbreaks of Salmonella Muenchen linked to pig farming in Germany, 2013 to 2014: Is something missing in our regulatory framework?
Q37551195	Typhoid fever acquired in the United States, 1999-2010: epidemiology, microbiology, and use of a space-time scan statistic for outbreak detection
Q47768482	Unusually high illness severity and short incubation periods in two foodborne outbreaks of Salmonella Heidelberg infections with potential coincident Staphylococcus aureus intoxication
Q45827389	Update of the molecular epidemiology of KPC-2-producing Klebsiella pneumoniae in Brazil: spread of clonal complex 11 (ST11, ST437 and ST340).
Q35073470	Use of pulsed-field gel electrophoresis for comparison of similar but distinguishable isolates of Shigella sonnei collected in Ireland and Italy
Q64136305	Use of whole genome sequencing to complement characterisation of a typhoid fever outbreak among a Marshallese community: Oklahoma, 2015
Q40291870	Utility of Combining Whole Genome Sequencing with Traditional Investigational Methods To Solve Foodborne Outbreaks of Salmonella Infections Associated with Chicken: A New Tool for Tackling This Challenging Food Vehicle
Q37156785	Utility of multilocus variable-number tandem-repeat analysis as a molecular tool for phylogenetic analysis of Shigella sonnei
Q46241954	Vancomycin-Resistant Enterococci (VRE) in The Intensive Care Unit in a Nonoutbreak Setting: Identification of Potential Reservoirs and Epidemiological Associations Between Patient and Environmental VRE.
Q90420325	Variability in Characterizing Escherichia coli from Cattle Feces: A Cautionary Tale
Q36414116	Variable expression of O:61 in Salmonella group C2
Q42119868	Variable within- and between-herd diversity of CTX-M cephalosporinase-bearing Escherichia coli isolates from dairy cattle
Q43156798	Variation in Antimicrobial resistance in sporadic and outbreak-related Salmonella enterica serovar Typhimurium
Q35960847	Variation in resistance traits, phylogenetic backgrounds, and virulence genotypes among Escherichia coli clinical isolates from adjacent hospital campuses serving distinct patient populations
Q39426298	Variations in ceftazidime and amoxicillin-clavulanate susceptibilities within a clonal infection of Burkholderia pseudomallei.
Q40403815	Various Sequence Types of Escherichia coli Isolates Coharboring blaNDM-5 and mcr-1 Genes from a Commercial Swine Farm in China
Q90383420	Virulence Genes, Shiga Toxin Subtypes, Serogroups, and Clonal Relationship of Shiga Toxin-Producing Escherichia Coli Strains Isolated from Livestock and Companion Animals
Q41359699	Virulence characterization and molecular subtyping of typical and atypical Escherichia coli O157:H7 and O157:H(-) isolated from fecal samples and beef carcasses in Mexico
Q36452603	Virulence genotypes and phylogenetic background of Escherichia coli serogroup O6 isolates from humans, dogs, and cats
Q40778116	Virulence-associated genes, antimicrobial resistance and molecular typing of Salmonella Typhimurium strains isolated from swine from 2000 to 2012 in Brazil
Q64999251	Weaned piglets: another factor to be considered for the control of Salmonella infection in breeding pig farms.
Q51783991	Whole Genome Sequence Analysis of CTX-M-15 Producing Klebsiella Isolates Allowed Dissecting a Polyclonal Outbreak Scenario.
Q92450254	Whole genome sequencing of Borrelia miyamotoi isolate Izh-4: reference for a complex bacterial genome
Q41112849	Whole genome sequencing provides an unambiguous link between Salmonella Dublin outbreak strain and a historical isolate
Q50025548	Whole-Genome-Sequencing characterization of bloodstream infection-causing hypervirulent Klebsiella pneumoniae of capsular serotype K2 and ST374.
Q36000450	Within-Farm Changes in Dairy Farm-Associated Salmonella Subtypes and Comparison to Human Clinical Isolates in Michigan, 2000-2001 and 2009
Q42953140	blaCTX-M-32 on an IncN plasmid in Escherichia coli from beef cattle in the United States
Q40543010	mgrB Mutations Mediating Polymyxin B Resistance in Klebsiella pneumoniae Isolates from Rectal Surveillance Swabs in Brazil.

P356	DOI	10.1089/FPD.2006.3.59
P698	PubMed publication ID	16602980

P2093	author name string	Timothy J Barrett
		B Swaminathan
		Efrain M Ribot
		S B Hunter
		D N Cameron
		M A Fair
		R Gautom
P433	issue	1
P921	main subject	Escherichia coli	Q25419
P304	page(s)	59-67
P577	publication date	2006-01-01
P1433	published in	Foodborne Pathogens and Disease	Q15759170
P1476	title	Standardization of pulsed-field gel electrophoresis protocols for the subtyping of Escherichia coli O157:H7, Salmonella, and Shigella for PulseNet
P478	volume	3

Standardization of pulsed-field gel electrophoresis protocols for the subtyping of Escherichia coli O157:H7, Salmonella, and Shigella for PulseNet

scientific article published in January 2006

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