Exploring the Genomic Traits of Non-toxigenic Vibrio parahaemolyticus Strains Isolated in Southern Chile.

scientific article published on 8 February 2018

Exploring the Genomic Traits of Non-toxigenic Vibrio parahaemolyticus Strains Isolated in Southern Chile. is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.3389/FMICB.2018.00161
P932PMC publication ID5809470
P698PubMed publication ID29472910

P50authorRoberto BastíasQ55414446
Daniel CastilloQ63770183
Leonardo PavezQ64658011
Nicolás PlazaQ87856184
P2093author name stringCarlos J Blondel
Gino Corsini
Katherine García
David E Loyola
Diliana Pérez-Reytor
Sebastián Ramírez-Araya
Víctor Jaña
P2860cites workFour genomic islands that mark post-1995 pandemic Vibrio parahaemolyticus isolatesQ21266596
AMPylation of Rho GTPases by Vibrio VopS disrupts effector binding and downstream signalingQ24318895
OrthoMCL-DB: querying a comprehensive multi-species collection of ortholog groupsQ24538674
A filamentous phage associated with recent pandemic Vibrio parahaemolyticus O3:K6 strainsQ24551007
Phage_Finder: automated identification and classification of prophage regions in complete bacterial genome sequencesQ24674211
Clustal W and Clustal X version 2.0Q27860517
Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal OmegaQ27860809
Detecting genomic islands using bioinformatics approachesQ28279840
Trimmomatic: a flexible trimmer for Illumina sequence dataQ29547278
Mauve: multiple alignment of conserved genomic sequence with rearrangementsQ29547292
BEDTools: a flexible suite of utilities for comparing genomic featuresQ29547332
A whole-genome assembly of DrosophilaQ29616863
Using the miraEST assembler for reliable and automated mRNA transcript assembly and SNP detection in sequenced ESTsQ29617281
PAL2NAL: robust conversion of protein sequence alignments into the corresponding codon alignmentsQ29617502
Review and guidelines for treatment of diarrhea caused by Vibrio parahaemolyticusQ30350710
Vibrio parahaemolyticus in shellfish and clinical samples during two large epidemics of diarrhoea in southern Chile.Q30353636
Distribution and dynamics of epidemic and pandemic Vibrio parahaemolyticus virulence factors.Q30357370
Characterization of the gluconate utilization system of Vibrio cholerae with special reference to virulence modulation.Q51482431
WebACTQ57518123
Putative type VI secretion systems of Vibrio parahaemolyticus contribute to adhesion to cultured cell monolayersQ83996383
Pollux: platform independent error correction of single and mixed genomesQ35543483
Functional characterization of the interaction between bacterial adhesin multivalent adhesion molecule 7 (MAM7) protein and its host cell ligands.Q35604214
Vibrio parahaemolyticus cell biology and pathogenicity determinantsQ36062473
Iron-Regulated Phospholipase C Activity Contributes to the Cytolytic Activity and Virulence of Acinetobacter baumanniiQ36201175
From cholera to corals: Viruses as drivers of virulence in a major coral bacterial pathogenQ36353397
Nontoxigenic Vibrio parahaemolyticus strains causing acute gastroenteritis.Q36414037
Genomic Features of Environmental and Clinical Vibrio parahaemolyticus Isolates Lacking Recognized Virulence Factors Are Dissimilar.Q36575103
Enterotoxigenicity of Vibrio parahaemolyticus with and without genes encoding thermostable direct hemolysinQ36950321
IslandViewer update: Improved genomic island discovery and visualization.Q36953918
Genetic analysis of Vibrio parahaemolyticus intestinal colonizationQ36978186
Transcriptome analysis of Vibrio parahaemolyticus in type III secretion system 1 inducing conditions.Q37493737
Real-time whole-genome sequencing for routine typing, surveillance, and outbreak detection of verotoxigenic Escherichia coliQ37713782
Sixty years from the discovery of Vibrio parahaemolyticus and some recollections.Q37970656
The RTX pore-forming toxin α-hemolysin of uropathogenic Escherichia coli: progress and perspectives.Q38068485
Virulence determinants for Vibrio parahaemolyticus infection.Q38083942
Cytotoxic cell vacuolating activity from Vibrio cholerae hemolysin.Q39514823
The pore-forming bacterial effector, VopQ, halts autophagic turnoverQ39802339
Mechanism of membrane damage by El Tor hemolysin of Vibrio cholerae O1.Q39825610
Identification of a new RTX-like gene cluster in Vibrio choleraeQ39977389
Purification and characterization of a hemolysin produced by a clinical isolate of Kanagawa phenomenon-negative Vibrio parahaemolyticus and related to the thermostable direct hemolysinQ40157937
Acute Hepatopancreatic Necrosis Disease-Causing Vibrio parahaemolyticus Strains Maintain an Antibacterial Type VI Secretion System with Versatile Effector RepertoiresQ40241879
CRISPR/Cas9 Screens Reveal Requirements for Host Cell Sulfation and Fucosylation in Bacterial Type III Secretion System-Mediated CytotoxicityQ40601360
The small RNA Spot 42 regulates the expression of the type III secretion system 1 (T3SS1) chaperone protein VP1682 in Vibrio parahaemolyticusQ40987468
Vibrio parahaemolyticus infection induces modulation of IL-8 secretion through dual pathway via VP1680 in Caco-2 cells.Q41931643
Comparative Genome Analyses of Vibrio anguillarum Strains Reveal a Link with Pathogenicity TraitsQ42316905
Microbial comparative pan-genomics using binomial mixture modelsQ42716795
A Vibrio effector protein is an inositol phosphatase and disrupts host cell membrane integrity.Q42931868
Gluconate metabolism is required for virulence of the soft-rot pathogen Pectobacterium carotovorumQ42968479
VopV, an F-actin-binding type III secretion effector, is required for Vibrio parahaemolyticus-induced enterotoxicityQ43033090
Detection of total and hemolysin-producing Vibrio parahaemolyticus in shellfish using multiplex PCR amplification of tl, tdh and trh.Q43338008
Presence of T3SS2 and other virulence-related genes in tdh-negative Vibrio parahaemolyticus environmental strains isolated from marine samples in the area of the Venetian Lagoon, ItalyQ43860893
The Trend of Vibrio parahaemolyticus Infections in Southern Thailand from 2006 to 2010Q30358487
A decrease in the proportion of infections by pandemic Vibrio parahaemolyticus in Hat Yai Hospital, southern Thailand.Q30366060
Molecular analysis of the emergence of pandemic Vibrio parahaemolyticus.Q30370329
Genome diversification within a clonal population of pandemic Vibrio parahaemolyticus seems to depend on the life circumstances of each individual bacteria.Q30373752
Epidemiology of Vibrio parahaemolyticus outbreaks, southern Chile.Q30374743
Comparative genomics reveals mechanism for short-term and long-term clonal transitions in pandemic Vibrio cholerae.Q30380277
Dynamics of clinical and environmental Vibrio parahaemolyticus strains during seafood-related summer diarrhea outbreaks in southern ChileQ30381313
Comparative genomic analysis of Vibrio parahaemolyticus: serotype conversion and virulenceQ30403474
Biochemical, serological, and virulence characterization of clinical and oyster Vibrio parahaemolyticus isolatesQ30416063
Genetic diversity of clinical and environmental Vibrio parahaemolyticus strains from the Pacific NorthwestQ30422011
Rise and fall of pandemic Vibrio parahaemolyticus serotype O3:K6 in southern ChileQ30422122
Detection of bacterial virulence genes by subtractive hybridization: identification of capsular polysaccharide of Burkholderia pseudomallei as a major virulence determinantQ30635403
EDGAR: a software framework for the comparative analysis of prokaryotic genomesQ33449008
FASconCAT: Convenient handling of data matricesQ33563428
Contribution of Vibrio parahaemolyticus virulence factors to cytotoxicity, enterotoxicity, and lethality in miceQ33768993
Bacterial phospholipases and pathogenesis.Q33779074
Zonula occludens toxin structure-function analysis. Identification of the fragment biologically active on tight junctions and of the zonulin receptor binding domainQ33940406
Effect on human cells of environmental Vibrio parahaemolyticus strains carrying type III secretion system 2.Q33963065
Cell vacuolation, a manifestation of the El tor hemolysin of Vibrio choleraeQ34003843
Lysogenic conversion by a filamentous phage encoding cholera toxinQ34062735
Purification and characterization of a hemolysin produced by Vibrio cholerae biotype El Tor: another toxic substance produced by cholera vibriosQ34100461
Genomic acquisition of a capsular polysaccharide virulence cluster by non-pathogenic Burkholderia isolatesQ34156158
RTX toxin structure and function: a story of numerous anomalies and few analogies in toxin biologyQ34288144
Comparison of the pathogenic potentials of environmental and clinical vibrio parahaemolyticus strains indicates a role for temperature regulation in virulenceQ34290309
Examination of the effects of Campylobacter concisus zonula occludens toxin on intestinal epithelial cells and macrophagesQ34527259
The CRISPR-Cas Immune System and Genetic Transfers: Reaching an EquilibriumQ34670906
Vibrio parahaemolyticus type VI secretion system 1 is activated in marine conditions to target bacteria, and is differentially regulated from system 2.Q34684036
Artemis and ACT: viewing, annotating and comparing sequences stored in a relational databaseQ34849651
Zonula occludens toxin acts as an adjuvant through different mucosal routes and induces protective immune responsesQ34852816
Estimating maximum likelihood phylogenies with PhyML.Q34976656
PHAST: a fast phage search toolQ35075734
MvirDB--a microbial database of protein toxins, virulence factors and antibiotic resistance genes for bio-defence applicationsQ35179282
PAIDB v2.0: exploration and analysis of pathogenicity and resistance islandsQ35254948
Thermostable direct hemolysin gene of Vibrio parahaemolyticus: a virulence gene acquired by a marine bacterium.Q35414752
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P4510describes a project that usesMIRAQ114076742
P921main subjectChileQ298
Vibrio parahaemolyticusQ134280
P304page(s)161
P577publication date2018-02-08
P1433published inFrontiers in MicrobiologyQ27723481
P1476titleExploring the Genomic Traits of Non-toxigenic Vibrio parahaemolyticus Strains Isolated in Southern Chile
P478volume9

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cites work (P2860)
Q57191749Accessory Toxins of Pathogens and Their Role in Epithelial Disruption During Infection
Q92661769Conservation of Small Regulatory RNAs in Vibrio parahaemolyticus: Possible role of RNA-OUT Encoded by the Pathogenicity Island (VPaI-7) of Pandemic Strains
Q91687866Diversification of Vibrio anguillarum Driven by the Bacteriophage CHOED
Q90576266Microevolution of Vibrio parahaemolyticus Isolated from Clinical, Acute Hepatopancreatic Necrosis Disease Infecting Shrimps, and Aquatic Production in China
Q55504065Widespread distribution of prophage-encoded virulence factors in marine Vibrio communities.

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