Comparative transcriptomes reveal novel evolutionary strategies adopted by Saccharomyces cerevisiae with improved xylose utilization capability.

scientific article published on 21 December 2016

Comparative transcriptomes reveal novel evolutionary strategies adopted by Saccharomyces cerevisiae with improved xylose utilization capability. is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1007/S00253-016-8046-Y
P698PubMed publication ID28004152

P2093author name stringYue-Qin Tang
Kenji Kida
Min Gou
Zhao-Yong Sun
Zi-Yuan Xia
Wei-Yi Zeng
P2860cites workMicrobial genetics: Evolution experiments with microorganisms: the dynamics and genetic bases of adaptationQ22122024
Reduced oxidative pentose phosphate pathway flux in recombinant xylose-utilizing Saccharomyces cerevisiae strains improves the ethanol yield from xyloseQ24536292
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Transposable elements and genome organization: a comprehensive survey of retrotransposons revealed by the complete Saccharomyces cerevisiae genome sequenceQ27929528
Molecular analysis of a Saccharomyces cerevisiae mutant with improved ability to utilize xylose shows enhanced expression of proteins involved in transport, initial xylose metabolism, and the pentose phosphate pathwayQ27931715
Pdc2 coordinates expression of the THI regulon in the yeast Saccharomyces cerevisiaeQ27934473
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Siderophore-iron uptake in saccharomyces cerevisiae. Identification of ferrichrome and fusarinine transportersQ27938421
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Growth-rate regulated genes have profound impact on interpretation of transcriptome profiling in Saccharomyces cerevisiaeQ28419084
Transcription analysis of recombinant industrial and laboratory Saccharomyces cerevisiae strains reveals the molecular basis for fermentation of glucose and xyloseQ28659365
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A quantitative model of glucose signaling in yeast reveals an incoherent feed forward loop leading to a specific, transient pulse of transcriptionQ34151833
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Optimal growth and ethanol production from xylose by recombinant Saccharomyces cerevisiae require moderate D-xylulokinase activityQ34879081
Engineering yeast hexokinase 2 for improved tolerance toward xylose-induced inactivationQ34990510
Employing a combinatorial expression approach to characterize xylose utilization in Saccharomyces cerevisiaeQ35188463
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Biosynthesis and function of GPI proteins in the yeast Saccharomyces cerevisiaeQ36543424
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Helically agitated mixing in dry dilute acid pretreatment enhances the bioconversion of corn stover into ethanolQ37539964
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Modulation of thiamine metabolism in Zea mays seedlings under conditions of abiotic stress.Q39384178
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Shuffling of promoters for multiple genes to optimize xylose fermentation in an engineered Saccharomyces cerevisiae strainQ40005202
Saccharomyces cerevisiae engineered for xylose metabolism exhibits a respiratory responseQ40283636
The upregulation of thiamine (vitamin B1) biosynthesis in Arabidopsis thaliana seedlings under salt and osmotic stress conditions is mediated by abscisic acid at the early stages of this stress response.Q40499749
Thiamin metabolism and thiamin diphosphate-dependent enzymes in the yeast Saccharomyces cerevisiae: genetic regulationQ40852166
Development of a D-xylose fermenting and inhibitor tolerant industrial Saccharomyces cerevisiae strain with high performance in lignocellulose hydrolysates using metabolic and evolutionary engineering.Q41394061
Analysis and prediction of the physiological effects of altered coenzyme specificity in xylose reductase and xylitol dehydrogenase during xylose fermentation by Saccharomyces cerevisiaeQ41824569
A genome wide analysis of the response to uncapped telomeres in budding yeast reveals a novel role for the NAD+ biosynthetic gene BNA2 in chromosome end protectionQ41936824
Increased expression of the oxidative pentose phosphate pathway and gluconeogenesis in anaerobically growing xylose-utilizing Saccharomyces cerevisiaeQ42035332
The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur.Q44203906
Minimal metabolic engineering of Saccharomyces cerevisiae for efficient anaerobic xylose fermentation: a proof of principleQ44812140
Antioxidant properties of S-adenosyl-L-methionine in Fe(2+)-initiated oxidationsQ44863354
Isolation of cobalt hyper-resistant mutants of Saccharomyces cerevisiae by in vivo evolutionary engineering approach.Q45939877
Evolutionary engineering of mixed-sugar utilization by a xylose-fermenting Saccharomyces cerevisiae strainQ46540264
Thiamine increases the resistance of baker's yeast Saccharomyces cerevisiae against oxidative, osmotic and thermal stress, through mechanisms partly independent of thiamine diphosphate-bound enzymes.Q46823444
Ethanol production from xylose by recombinant Saccharomyces cerevisiae expressing protein-engineered NADH-preferring xylose reductase from Pichia stipitis.Q50920119
Role of mutator alleles in adaptive evolution.Q54564129
Metabolism of sulfur amino acids in Saccharomyces cerevisiaeQ126946738
P433issue4
P407language of work or nameEnglishQ1860
P921main subjectSaccharomyces cerevisiaeQ719725
P304page(s)1753-1767
P577publication date2016-12-21
P1433published inApplied Microbiology and BiotechnologyQ13553694
P1476titleComparative transcriptomes reveal novel evolutionary strategies adopted by Saccharomyces cerevisiae with improved xylose utilization capability.
P478volume101

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cites work (P2860)
Q49883228Association of improved oxidative stress tolerance and alleviation of glucose repression with superior xylose-utilization capability by a natural isolate of Saccharomyces cerevisiae
Q89539259Biochemical routes for uptake and conversion of xylose by microorganisms
Q38743239Engineering of Saccharomyces cerevisiae for the efficient co-utilization of glucose and xylose
Q92618238Molecular evolutionary engineering of xylose isomerase to improve its catalytic activity and performance of micro-aerobic glucose/xylose co-fermentation in Saccharomyces cerevisiae
Q64109188Rewired cellular signaling coordinates sugar and hypoxic responses for anaerobic xylose fermentation in yeast

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