| human | Q5 |
| P6634 | LinkedIn personal profile ID | johnrossen |
| P2798 | Loop ID | 251676 |
| P856 | official website | https://www.rug.nl/research/portal/en/persons/john-rossen(a4007086-a348-40ee-a006-3d616e4064e4).html |
| P496 | ORCID iD | 0000-0002-7167-8623 |
| P1053 | ResearcherID | G-7564-2011 |
| P734 | family name | Engell-Rossen | Q21515010 |
| Engell-Rossen | Q21515010 | ||
| Engell-Rossen | Q21515010 | ||
| P735 | given name | John | Q4925477 |
| John | Q4925477 | ||
| P6104 | maintained by WikiProject | WikiProject Invasion Biology | Q56241615 |
| P106 | occupation | researcher | Q1650915 |
| P21 | sex or gender | male | Q6581097 |
| Q50348406 | 814A Prospective Analysis of the Clinical Spectrum of Different Subtypes Human Enterovirus and Human Parechovirus. |
| Q41163299 | A murine and a porcine coronavirus are released from opposite surfaces of the same epithelial cells. |
| Q47140046 | A novel Tn1696-like composite transposon (Tn6404) harboring bla IMP-4 in a Klebsiella pneumoniae isolate carrying a rare ESBL gene bla SFO-1. |
| Q33648976 | A systemic neutrophil response precedes robust CD8(+) T-cell activation during natural respiratory syncytial virus infection in infants. |
| Q43455973 | Absence of human metapneumovirus co-infection in cases of severe respiratory syncytial virus infection. |
| Q96346007 | After the bite: bacterial transmission from grey seals (Halichoerus grypus) to harbour porpoises (Phocoena phocoena) |
| Q58697017 | An ancient family of mobile genomic islands introducing cephalosporinase and carbapenemase genes in Enterobacteriaceae |
| Q41167422 | An outbreak of colistin-resistant Klebsiella pneumoniae carbapenemase-producing Klebsiella pneumoniae in the Netherlands (July to December 2013), with inter-institutional spread |
| Q113695993 | Antibiotic Resistance and Molecular Characterization of Cronobacter sakazakii Strains Isolated from Powdered Infant Formula Milk |
| Q47557125 | Antibiotic resistance plasmids cointegrated into a megaplasmid harbouring the blaOXA-427 carbapenemase gene |
| Q57067324 | Antimicrobial Resistance in Class 1 Integron-Positive Shiga Toxin-Producing Isolated from Cattle, Pigs, Food and Farm Environment |
| Q30239858 | Application of next generation sequencing in clinical microbiology and infection prevention |
| Q54209323 | ArgO145, a Stx2a prophage of a bovine O145:H- STEC strain, is closely related to phages of virulent human strains. |
| Q35455807 | Assessing the public health risk of Shiga toxin-producing Escherichia coli by use of a rapid diagnostic screening algorithm |
| Q103823897 | Assessment of Viral Targeted Sequence Capture Using Nanopore Sequencing Directly from Clinical Samples |
| Q61809820 | Association between rectal colonization with Highly Resistant Gram-negative Rods (HR-GNRs) and subsequent infection with HR-GNRs in clinical patients: A one year historical cohort study |
| Q31105408 | Associations between pathogens in the upper respiratory tract of young children: interplay between viruses and bacteria |
| Q63880352 | Author Correction: Critical steps in clinical shotgun metagenomics for the concomitant detection and typing of microbial pathogens |
| Q52602916 | Campylobacter blaseri sp. nov., isolated from common seals (Phoca vitulina). |
| Q111508096 | Centre-specific bacterial pathogen typing affects infection-control decision making |
| Q53490229 | Changes in oral microflora after full-mouth tooth extraction: a prospective cohort study. |
| Q40890558 | Characterization of a CTX-M-15 Producing Klebsiella Pneumoniae Outbreak Strain Assigned to a Novel Sequence Type (1427). |
| Q94602242 | Characterization of fosfomycin heteroresistance among MDR Escherichia coli isolates from hospitalized patients in Rio de Janeiro, Brazil |
| Q46271483 | Characterization of the population structure, drug resistance mechanisms and plasmids of the community-associated Enterobacter cloacae complex in China. |
| Q37548453 | Clinical epidemiology of bocavirus, rhinovirus, two polyomaviruses and four coronaviruses in HIV-infected and HIV-uninfected South African children |
| Q40152515 | Clinical sensitivity and specificity of the Check-Points Check-Direct ESBL Screen for BD MAX, a real-time PCR for direct ESBL detection from rectal swabs. |
| Q92404660 | Commonality of Multidrug-Resistant Klebsiella pneumoniae ST348 Isolates in Horses and Humans in Portugal |
| Q63880357 | Comparative genomics reveals a lack of evidence for pigeons as a main source of stx-carrying Escherichia coli causing disease in humans and the common existence of hybrid Shiga toxin-producing and enteropathogenic E. coli pathotypes |
| Q37470276 | Comparison of 14 molecular assays for detection of Mycobacterium tuberculosis complex in bronchoalveolar lavage fluid. |
| Q55376808 | Complete Coding Sequences of Five Dengue Virus Type 2 Clinical Isolates from Venezuela Obtained through Shotgun Metagenomics. |
| Q52603874 | Complete Genome Sequences of Two Methicillin-Resistant Staphylococcus haemolyticus Isolates of Multilocus Sequence Type 25, First Detected by Shotgun Metagenomics. |
| Q36339743 | Comprehensive Characterization of Escherichia coli O104:H4 Isolated from Patients in the Netherlands. |
| Q53704735 | Comprehensive Molecular Characterization of Escherichia coli Isolates from Urine Samples of Hospitalized Patients in Rio de Janeiro, Brazil. |
| Q47234763 | Conserved Citrullinating Exoenzymes in Porphyromonas Species |
| Q40142759 | Contribution of AcrAB-TolC to multidrug resistance in an Escherichia coli sequence type 131 isolate. |
| Q41384324 | Coronaviruses in polarized epithelial cells. |
| Q58454509 | Critical steps in clinical shotgun metagenomics for the concomitant detection and typing of microbial pathogens |
| Q35165288 | Cross-border comparison of the Dutch and German guidelines on multidrug-resistant Gram-negative microorganisms |
| Q42745655 | Cyclooxygenase activity is important for efficient replication of mouse hepatitis virus at an early stage of infection. |
| Q90062398 | DEN-IM: dengue virus genotyping from amplicon and shotgun metagenomic sequencing |
| Q92350904 | Decreasing prevalence of contamination with extended-spectrum beta-lactamase-producing Enterobacteriaceae (ESBL-E) in retail chicken meat in the Netherlands |
| Q94586541 | Description of Citrobacter cronae sp. nov., isolated from human rectal swabs and stool samples |
| Q63880409 | Detection of Bartonella spp. DNA in Clinical Specimens Using an Internally Controlled Real-Time PCR Assay |
| Q54238221 | Detection of Giardia lamblia, Cryptosporidium spp. and Entamoeba histolytica in clinical stool samples by using multiplex real-time PCR after automated DNA isolation. |
| Q90028048 | Detection of a novel mcr-5.4 gene variant in hospital tap water by shotgun metagenomic sequencing |
| Q92748136 | Detection of an In104-like integron carrying a blaIMP-34 gene in Enterobacter cloacae isolates co-producing IMP-34 and VIM-1 |
| Q63880412 | Detection of enterovirus RNA in cerebrospinal fluid: Comparison of two molecular assays |
| Q63880384 | Detection of in Water from Hospital Dental Chair Units and Molecular Characterization by Whole-Genome Sequencing |
| Q91168953 | Determining the Virulence Properties of Escherichia coli ST131 Containing Bacteriocin-Encoding Plasmids Using Short- and Long-Read Sequencing and Comparing Them with Those of Other E. coli Lineages |
| Q54202876 | Diagnosis of bloodstream infections from positive blood cultures and directly from blood samples: recent developments in molecular approaches. |
| Q36436697 | Diagnostic value of respiratory virus detection in symptomatic children using real-time PCR. |
| Q33432344 | Diarrhea, Urosepsis and Hemolytic Uremic Syndrome Caused by the Same Heteropathogenic Escherichia coli Strain. |
| Q43734454 | Disease severity and viral load are correlated in infants with primary respiratory syncytial virus infection in the community. |
| Q45390427 | Dynamics of human respiratory virus-specific CD8+ T cell responses in blood and airways during episodes of common cold. |
| Q35685214 | Dysbiosis of upper respiratory tract microbiota in elderly pneumonia patients |
| Q63880399 | ESCMID postgraduate education course: applications of MALDI-TOF mass spectrometry in clinical microbiology |
| Q63880392 | ESCMID postgraduate education course: regional capacity building for integration of next-generation sequencing in the clinical microlab |
| Q63880379 | Elucidating vancomycin-resistant Enterococcus faecium outbreaks: the role of clonal spread and movement of mobile genetic elements |
| Q37657191 | Emergence of a novel Enterobacter kobei clone carrying chromosomal-encoded CTX-M-12 with diversified pathogenicity in northeast China |
| Q26751373 | Enterovirus and parechovirus infection in children: a brief overview |
| Q36637856 | Entry and release of transmissible gastroenteritis coronavirus are restricted to apical surfaces of polarized epithelial cells. |
| Q63880364 | Epidemiological Typing of Serratia marcescens Isolates by Whole-Genome Multilocus Sequence Typing |
| Q92684354 | Epidemiological and clinical profile of infective endocarditis at a Brazilian tertiary care center: an eight-year prospective study |
| Q42373445 | Epidemiology of Extended-Spectrum β-Lactamase-Producing E. coli and Vancomycin-Resistant Enterococci in the Northern Dutch-German Cross-Border Region. |
| Q40124098 | Epidemiology of Staphylococcus aureus in a burn unit of a tertiary care center in Ghana |
| Q40145721 | Evaluation of Patients with Community-Acquired Pneumonia Caused by Zoonotic Pathogens in an Area with a High Density of Animal Farms |
| Q57921958 | Evaluation of a Culture-Dependent Algorithm and a Molecular Algorithm for Identification of Shigella spp., Escherichia coli, and Enteroinvasive E. coli |
| Q50086168 | Evaluation of an Accelerated Workflow for Surveillance of ESBL (CTX-M)-Producing Escherichia coli Using Amplicon-Based Next-Generation Sequencing and Automated Analysis |
| Q34292704 | Evaluation of yield of currently available diagnostics by sample type to optimize detection of respiratory pathogens in patients with a community-acquired pneumonia |
| Q47447940 | Expansion of KPC-producing klebsiella pneumoniae with various mgrB-mutations giving rise to colistin-resistance: the role of ISL3 on plasmids |
| Q41476168 | Expression of functional growth hormone receptor in a mouse L cell line infected with recombinant vaccinia virus. |
| Q57652269 | Extended-spectrum beta-lactamase producing Enterobacteriaceae (ESBL-E) isolated from bean sprouts in the Netherlands |
| Q63880421 | Feline and canine coronaviruses are released from the basolateral side of polarized epithelial LLC-PK1 cells expressing the recombinant feline aminopeptidase-N cDNA |
| Q50083460 | First report of OXA-48-producing Escherichia coli in Croatia and confirmed intergenic transfer of a plasmid-carrying blaOXA-48 from Klebsiella pneumoniae |
| Q40258541 | First report of invasive liver abscess syndrome with endophthalmitis caused by a K2 serotype ST2398 hypervirulent Klebsiella pneumoniae in Germany, 2016. |
| Q63880389 | Fosfomycin Etest for Enterobacteriaceae: Interobserver and interlaboratory agreement |
| Q35058098 | Genetic Diversity of Staphylococcus aureus in Buruli Ulcer |
| Q40921819 | Genetic characterization of Shiga toxin-producing Escherichia coli O26:H11 strains isolated from animal, food, and clinical samples. |
| Q41995037 | Genetic loci of Staphylococcus aureus associated with anti-neutrophil cytoplasmic autoantibody (ANCA)-associated vasculitides |
| Q63880426 | Genomic organization and expression of the 3' end of the canine and feline enteric coronaviruses |
| Q35806862 | Genotypic diversity of Coxiella burnetii in the 2007-2010 Q fever outbreak episodes in The Netherlands |
| Q36239839 | High Interlaboratory Reproducibility and Accuracy of Next-Generation-Sequencing-Based Bacterial Genotyping in a Ring Trial |
| Q37189542 | Human bocavirus and KI/WU polyomaviruses in pediatric intensive care patients. |
| Q63880414 | Human polyomavirus KI and WU in adults with community acquired pneumonia in The Netherlands, 2008–2009 |
| Q43606037 | Human rhinovirus and wheezing: short and long-term associations in children. |
| Q40345192 | Identification by genotyping of a commercial antigen preparation as the source of a laboratory contamination with Coxiella burnetii and as an unexpected rich source of control DNA. |
| Q51787213 | Identification of a KPC-9-producing Klebsiella pneumoniae ST258 cluster among KPC-2-producing isolates of an ongoing outbreak in Northwestern Greece: a retrospective study. |
| Q47567273 | Identification of a novel genomic island associated with vanD-type vancomycin-resistance in six Dutch vancomycin-resistant Enterococcus faecium. |
| Q35191251 | Immunogenicity, boostability, and sustainability of the immune response after vaccination against Influenza A virus (H1N1) 2009 in a healthy population |
| Q54394682 | Impact of PCR for respiratory viruses on antibiotic use: theory and practice. |
| Q91819214 | Incidence, clinical implications and impact on public health of infections with Shigella spp. and entero-invasive Escherichia coli (EIEC): results of a multicenter cross-sectional study in the Netherlands during 2016-2017 |
| Q42021654 | Increased detection of respiratory syncytial virus, influenza viruses, parainfluenza viruses, and adenoviruses with real-time PCR in samples from patients with respiratory symptoms. |
| Q40124961 | Increased risk of pneumonia in residents living near poultry farms: does the upper respiratory tract microbiota play a role? |
| Q89702066 | Innovative and rapid antimicrobial susceptibility testing systems |
| Q48133785 | Integrated Stewardship Model Comprising Antimicrobial, Infection Prevention, and Diagnostic Stewardship (AID Stewardship). |
| Q35831814 | Interaction of mouse hepatitis virus (MHV) spike glycoprotein with receptor glycoprotein MHVR is required for infection with an MHV strain that expresses the hemagglutinin-esterase glycoprotein |
| Q34489451 | Interlaboratory evaluation of different extraction and real-time PCR methods for detection of Coxiella burnetii DNA in serum. |
| Q36174068 | Is Shiga Toxin-Negative Escherichia coli O157:H7 Enteropathogenic or Enterohemorrhagic Escherichia coli? Comprehensive Molecular Analysis Using Whole-Genome Sequencing. |
| Q40922495 | Isolation of an NDM-5-producing ST16 Klebsiella pneumoniae from a Dutch patient without travel history abroad, August 2015. |
| Q34570150 | Laboratory-based surveillance in the molecular era: the TYPENED model, a joint data-sharing platform for clinical and public health laboratories. |
| Q38896850 | Latent introduction to the Netherlands of multiple antibiotic resistance including NDM-1 after hospitalisation in Egypt, August 2013. |
| Q33556028 | Low anti-staphylococcal IgG responses in granulomatosis with polyangiitis patients despite long-term Staphylococcus aureus exposure |
| Q115652351 | MALDI-TOF MS Using a Custom-Made Database, Biomarker Assignment, or Mathematical Classifiers Does Not Differentiate Shigella spp. and Escherichia coli |
| Q37193523 | MRSA Prevalence and Associated Risk Factors among Health-Care Workers in Non-outbreak Situations in the Dutch-German EUREGIO. |
| Q46246546 | Methicillin Resistant Staphylococcus aureus Transmission in a Ghanaian Burn Unit: The Importance of Active Surveillance in Resource-Limited Settings. |
| Q35770770 | Molecular Characterization of Staphylococcus aureus Isolates Transmitted between Patients with Buruli Ulcer |
| Q35725709 | Molecular Typing of Enterobacteriaceae from Pig Holdings in North-Western Germany Reveals Extended- Spectrum and AmpC β-Lactamases Producing but no Carbapenem Resistant Ones. |
| Q63880405 | Molecular epidemiology of meticillin-resistant Staphylococcus aureus (MRSA): think regionally but use globally uniform typing languages |
| Q40487899 | Multicenter evaluation of molecular and culture-dependent diagnostics for Shigella species and Entero-invasive Escherichia coli in the Netherlands. |
| Q33837065 | No nosocomial transmission under standard hygiene precautions in short term contact patients in case of an unexpected ESBL or Q&A E. coli positive patient: a one-year prospective cohort study within three regional hospitals |
| Q45899337 | Norovirus disease associated with excess mortality and use of statins: a retrospective cohort study of an outbreak following a pilgrimage to Lourdes. |
| Q35848639 | Nucleocapsid-independent assembly of coronavirus-like particles by co-expression of viral envelope protein genes. |
| Q41513108 | OXY-2-15, a novel variant showing increased ceftazidime hydrolytic activity. |
| Q37846162 | Performance of cobas® 4800 and m2000 real-time™ assays for detection of Chlamydia trachomatis and Neisseria gonorrhoeae in rectal and self-collected vaginal specimen |
| Q47631226 | Practical issues in implementing whole-genome-sequencing in routine diagnostic microbiology |
| Q30378238 | Preparing the outbreak assistance laboratory network in the Netherlands for the detection of the influenza virus A(H1N1) variant. |
| Q40859225 | Presence of mcr-1-positive Enterobacteriaceae in retail chicken meat but not in humans in the Netherlands since 2009. |
| Q63880367 | Prevalence of antimicrobial resistance genes in Bacteroides spp. and Prevotella spp. Dutch clinical isolates |
| Q36667941 | Prevalence, risk factors and molecular epidemiology of highly resistant gram negative rods in hospitalized patients in the Dutch region Kennemerland. |
| Q63880370 | Proof of an Outer Membrane Target of the Efflux Inhibitor Phe-Arg-β-Naphthylamide from Random Mutagenesis |
| Q60918169 | Proportion of asylum seekers carrying multi-drug resistant microorganisms is persistently increased after arrival in the Netherlands |
| Q39998428 | Prospective assessment of clinical symptoms associated with enterovirus and parechovirus genotypes in a multicenter study in Dutch children. |
| Q42274568 | Prospective comparison of the detection rates of human enterovirus and parechovirus RT-qPCR and viral culture in different pediatric specimens. |
| Q41934877 | Real-time genomic investigation underlying the public health response to a Shiga toxin-producing Escherichia coli O26:H11 outbreak in a nursery. |
| Q91150653 | Reduced Fitness Costs of mcr-1.2 Compared to Mutated pmrB in Isogenic Colistin-Resistant KPC-3-Producing Klebsiella pneumoniae |
| Q44553248 | Reduction of the nosocomial meticillin-resistant Staphylococcus aureus incidence density by a region-wide search and follow-strategy in forty German hospitals of the EUREGIO, 2009 to 2011. |
| Q36369528 | Reprint of "Application of next generation sequencing in clinical microbiology and infection prevention". |
| Q41170579 | Retrospective identification of a previously undetected clinical case of OXA-48-producing K. pneumoniae and E. coli: the importance of adequate detection guidelines |
| Q90265273 | Revealing the Virulence Potential of Clinical and Environmental Aspergillus fumigatus Isolates Using Whole-Genome Sequencing |
| Q42272647 | September through October 2010 multi-centre study in the Netherlands examining laboratory ability to detect enterovirus 68, an emerging respiratory pathogen |
| Q50021028 | Silent transmission of an IS1294b-deactivated mcr-1 gene with inducible colistin resistance |
| Q58699399 | Sonication of heart valves detects more bacteria in infective endocarditis |
| Q93037276 | Sputum microbiome profiling in COPD: beyond singular pathogen detection |
| Q30227873 | Strengthening the diagnostic capacity to detect Bio Safety Level 3 organisms in unusual respiratory viral outbreaks |
| Q63880417 | Strong Association between Respiratory Viral Infection Early after Hematopoietic Stem Cell Transplantation and the Development of Life-Threatening Acute and Chronic Alloimmune Lung Syndromes |
| Q38694779 | Structural characterisation of Toll-like receptor 1 (TLR1) and Toll-like receptor 6 (TLR6) in elephant and harbor seals |
| Q89723024 | Surveillance-embedded genomic outbreak resolution of methicillin-susceptible Staphylococcus aureus in a neonatal intensive care unit |
| Q40173763 | Targeted next-generation sequencing of the 16S-23S rRNA region for culture-independent bacterial identification - increased discrimination of closely related species |
| Q57179200 | The challenges of designing a benchmark strategy for bioinformatics pipelines in the identification of antimicrobial resistance determinants using next generation sequencing technologies |
| Q56795531 | The dominance of human coronavirus OC43 and NL63 infections in infants |
| Q48573532 | The efficacy of home telemonitoring versus conventional follow-up: a randomised controlled trial among teenagers with inflammatory bowel disease. |
| Q41500134 | The mosaic genome structure and phylogeny of Shiga toxin-producing Escherichia coli O104:H4 is driven by short-term adaptation. |
| Q93269858 | The phylogenetic landscape and nosocomial spread of the multidrug-resistant opportunist Stenotrophomonas maltophilia |
| Q46311444 | The tongue microbiome in healthy subjects and patients with intra-oral halitosis. |
| Q42248651 | The value of signs and symptoms in differentiating between bacterial, viral and mixed aetiology in patients with community-acquired pneumonia. |
| Q39577283 | The viral spike protein is not involved in the polarized sorting of coronaviruses in epithelial cells. |
| Q52674052 | There's no place like OM: Vesicular sorting and secretion of the peptidylarginine deiminase of Porphyromonas gingivalis. |
| Q63880387 | Three metronidazole-resistant Prevotella bivia strains harbour a mobile element, encoding a novel nim gene, nimK, and an efflux small MDR transporter |
| Q45383639 | Transmission of respiratory syncytial virus at the paediatric intensive-care unit: a prospective study using real-time PCR. |
| Q63880382 | Typing and Species Identification of Clinical Klebsiella Isolates by Fourier Transform Infrared Spectroscopy and Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry |
| Q40278428 | Unusual severe case of hemolytic uremic syndrome due to Shiga toxin 2d-producing E. coli O80:H2. |
| Q38364455 | Use of whole-genome sequencing to trace, control and characterize the regional expansion of extended-spectrum β-lactamase producing ST15 Klebsiella pneumoniae. |
| Q28742334 | Variability and diversity of nasopharyngeal microbiota in children: a metagenomic analysis |
| Q44274471 | Viral and bacterial aetiology of community-acquired pneumonia in adults. |
| Q115652478 | Virulence Factors of Enteric Pathogenic Escherichia coli: A Review |
| Q40238170 | Virulence potential of Staphylococcus aureus isolates from Buruli ulcer patients |
| Q37289994 | Virulence, Antimicrobial Resistance Properties and Phylogenetic Background of Non-H7 Enteropathogenic Escherichia coli O157. |
| Q91861332 | Whole genome sequencing characterization of Slovenian carbapenem-resistant Klebsiella pneumoniae, including OXA-48 and NDM-1 producing outbreak isolates |
| Q37434290 | Whole-Genome Multilocus Sequence Typing of Extended-Spectrum-Beta-Lactamase-Producing Enterobacteriaceae |
| Q92379844 | Whole-Genome Sequences of Two NDM-1-Producing Pseudomonas aeruginosa Strains Isolated in a Clinical Setting in Albania in 2018 |
| Q40758497 | Whole-genome characterization and genotyping of global WU polyomavirus strains |
| Q52354629 | [Polymicrobial infections: ecosystems with special properties]. |
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