Horizontal Transfer of Symbiosis Genes within and Between Rhizobial Genera: Occurrence and Importance

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Horizontal Transfer of Symbiosis Genes within and Between Rhizobial Genera: Occurrence and Importance is …
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scholarly articleQ13442814

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P356DOI10.3390/GENES9070321
P932PMC publication ID6071183
P698PubMed publication ID29954096

P50authorEuan K JamesQ50034661
Marcelo F SimonQ57237782
Sofie De MeyerQ57237785
Simon HodgeQ57237788
Mitchell AndrewsQ57237791
Peter YoungQ42613148
P2093author name stringTomasz Stępkowski
P2860cites workLotus endemic to the Canary Islands are nodulated by diverse and novel rhizobial species and symbiotypesQ48064937
Genetic diversity and biogeography of rhizobia associated with Caragana species in three ecological regions of ChinaQ48071273
Genomic Diversity in the Endosymbiotic Bacterium Rhizobium leguminosarum.Q48174403
Genetic diversity of bradyrhizobial populations from diverse geographic origins that nodulate Lupinus spp. and Ornithopus spp.Q48216467
Classification of rhizobia based on nodC and nifH gene analysis reveals a close phylogenetic relationship among Phaseolus vulgaris symbiontsQ48372289
Nodulation of Lupinus albus by strains of Ochrobactrum lupini sp. nov.Q24520026
A new species of Devosia that forms a unique nitrogen-fixing root-nodule symbiosis with the aquatic legume Neptunia natans (L.f.) druceQ24537146
Rhizobia with different symbiotic efficiencies nodulate Acaciella angustissima in Mexico, including Sinorhizobium chiapanecum sp. nov. which has common symbiotic genes with Sinorhizobium mexicanumQ24649772
The Role of Flavonoids in Nodulation Host-Range Specificity: An UpdateQ28077654
Biological nitrogen fixation: rates, patterns and ecological controls in terrestrial ecosystemsQ28681422
Assembly and transfer of tripartite integrative and conjugative genetic elementsQ28822597
Novel Cupriavidus Strains Isolated from Root Nodules of Native Uruguayan Mimosa SpeciesQ28829081
Diverse flavonoids stimulate NodD1 binding to nod gene promoters in Sinorhizobium melilotiQ29346920
MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger DatasetsQ29616345
Methylotrophic Methylobacterium bacteria nodulate and fix nitrogen in symbiosis with legumesQ30620816
Rhizobium laguerreae sp. nov. nodulates Vicia faba on several continentsQ30670209
Microvirga vignae sp. nov., a root nodule symbiotic bacterium isolated from cowpea grown in semi-arid BrazilQ30687428
The endemic Genista versicolor from Sierra Nevada National Park in Spain is nodulated by putative new Bradyrhizobium species and a novel symbiovar (sierranevadense).Q30699863
Burkholderia sp. induces functional nodules on the South African invasive legume Dipogon lignosus (Phaseoleae) in New Zealand soilsQ30815310
Genetic diversity and distribution of bradyrhizobia nodulating peanut in acid-neutral soils in Guangdong Province.Q51586748
Diversity of endophytic bacteria within nodules of the Sphaerophysa salsula in different regions of Loess Plateau in China.Q51607721
Phylogeny and Phylogeography of Rhizobial Symbionts Nodulating Legumes of the Tribe Genisteae.Q52656073
Excision and transfer of the Mesorhizobium loti R7A symbiosis island requires an integrase IntS, a novel recombination directionality factor RdfS, and a putative relaxase RlxSQ61777308
In situ lateral transfer of symbiosis islands results in rapid evolution of diverse competitive strains of mesorhizobia suboptimal in symbiotic nitrogen fixation on the pasture legume Biserrula pelecinus LQ81096016
Symbiotic efficiency and phylogeny of the rhizobia isolated from Leucaena leucocephala in arid-hot river valley area in Panxi, Sichuan, ChinaQ84530415
Multilocus sequence analysis reveals multiple symbiovars within Mesorhizobium speciesQ44417920
Chickpea rhizobia symbiosis genes are highly conserved across multiple Mesorhizobium speciesQ44596584
Strains nodulating Lupinus albus on different continents belong to several new chromosomal and symbiotic lineages within BradyrhizobiumQ46364210
Genetic and phenotypic diversity of rhizobia nodulating chickpea (Cicer arietinum L.) in soils from southern and central EthiopiaQ46366959
A novel symbiovar (aegeanense) of the genus Ensifer nodulates Vigna unguiculataQ46414838
Diverse rhizobia associated with Sophora alopecuroides grown in different regions of Loess Plateau in ChinaQ46441593
Genetic diversity and symbiotic evolution of rhizobia from root nodules of Coronilla variaQ46512656
Phylogenetic Diversity of Ammopiptanthus Rhizobia and Distribution of Rhizobia Associated with Ammopiptanthus mongolicus in Diverse Regions of Northwest ChinaQ46563534
Diversity and phylogeny of rhizobia associated with Desmodium spp. in Panxi, Sichuan, ChinaQ46625797
Inhibition of glutamine synthetase by phosphinothricin leads to transcriptome reprograming in root nodules of Medicago truncatulaQ48025496
Genetic diversity of indigenous rhizobial symbionts of the Lupinus mariae-josephae endemism from alkaline-limed soils within its area of distribution in Eastern SpainQ48041484
Rhizobium anhuiense sp. nov., isolated from effective nodules of Vicia faba and Pisum sativum.Q30961565
Average nucleotide identity of genome sequences supports the description of Rhizobium lentis sp. nov., Rhizobium bangladeshense sp. nov. and Rhizobium binae sp. nov. from lentil (Lens culinaris) nodulesQ30968887
Bradyrhizobium canariense sp. nov., an acid-tolerant endosymbiont that nodulates endemic genistoid legumes (Papilionoideae: Genisteae) from the Canary Islands, along with Bradyrhizobium japonicum bv. genistearum, Bradyrhizobium genospecies [...]Q30985070
Mesorhizobium waimense sp. nov. isolated from Sophora longicarinata root nodules and Mesorhizobium cantuariense sp. nov. isolated from Sophora microphylla root nodules.Q30988852
Mesorhizobium calcicola sp. nov., Mesorhizobium waitakense sp. nov., Mesorhizobium sophorae sp. nov., Mesorhizobium newzealandense sp. nov. and Mesorhizobium kowhaii sp. nov. isolated from Sophora root nodules in New Zealand.Q31028455
Rhizobium lusitanum sp. nov. a bacterium that nodulates Phaseolus vulgarisQ31073103
Evolution and taxonomy of native mesorhizobia nodulating medicinal Glycyrrhiza species in ChinaQ31083390
Rhizobium altiplani sp. nov., isolated from effective nodules on Mimosa pudica growing in untypically alkaline soil in central BrazilQ31117181
Phylogenetic diversity based on rrs, atpD, recA genes and 16S-23S intergenic sequence analyses of rhizobial strains isolated from Vicia faba and Pisum sativum in Peru.Q31135485
Rhizobium multihospitium sp. nov., isolated from multiple legume species native of Xinjiang, ChinaQ31161504
Cowpea and peanut in southern Africa are nodulated by diverse Bradyrhizobium strains harboring nodulation genes that belong to the large pantropical clade common in AfricaQ33341342
Eukaryotic control on bacterial cell cycle and differentiation in the Rhizobium-legume symbiosisQ33342220
Phylogeny of Symbiotic Genes and the Symbiotic Properties of Rhizobia Specific to Astragalus glycyphyllos L.Q33361767
Rhizobium fabae sp. nov., a bacterium that nodulates Vicia fabaQ33390230
Nodulation of Sesbania species by Rhizobium (Agrobacterium) strain IRBG74 and other rhizobia.Q33474523
Specificity in Legume-Rhizobia SymbiosesQ33624297
Ensifer sojae sp. nov., isolated from root nodules of Glycine max grown in saline-alkaline soilsQ33695683
Molecular basis of symbiotic promiscuityQ33855261
Genetic diversity of root nodule bacteria nodulating Lotus corniculatus and Anthyllis vulneraria in SwedenQ33874810
Nodulating strains of Rhizobium loti arise through chromosomal symbiotic gene transfer in the environmentQ33942923
Biodiversity and biogeography of rhizobia associated with soybean plants grown in the North China Plain.Q33969767
Bradyrhizobium daqingense sp. nov., isolated from soybean nodulesQ34031700
Burkholderia species are ancient symbionts of legumesQ34087492
Phylogenetic diversity and symbiotic functioning in mungbean (Vigna radiata L. Wilczek) bradyrhizobia from contrast agro-ecological regions of Nepal.Q34104431
Microvirga lupini sp. nov., Microvirga lotononidis sp. nov. and Microvirga zambiensis sp. nov. are alphaproteobacterial root-nodule bacteria that specifically nodulate and fix nitrogen with geographically and taxonomically separate legume hostsQ34112040
Burkholderia and Cupriavidus spp. are the preferred symbionts of Mimosa spp. in southern China.Q34135944
Phylogenetic multilocus sequence analysis identifies seven novel Ensifer genospecies isolated from a less-well-explored biogeographical region in East AfricaQ34161778
Bradyrhizobium canariense and Bradyrhizobium japonicum are the two dominant rhizobium species in root nodules of lupin and serradella plants growing in Europe.Q34180106
Rhizobium pisi sv. trifolii K3.22 harboring nod genes of the Rhizobium leguminosarum sv. trifolii clusterQ34333793
Evolution of rhizobia by acquisition of a 500-kb symbiosis island that integrates into a phe-tRNA geneQ34465580
Endemic Mimosa species from Mexico prefer alphaproteobacterial rhizobial symbionts.Q34487050
Bradyrhizobium guangdongense sp. nov. and Bradyrhizobium guangxiense sp. nov., isolated from effective nodules of peanutQ34495830
Strains of Mesorhizobium amorphae and Mesorhizobium tianshanense, carrying symbiotic genes of common chickpea endosymbiotic species, constitute a novel biovar (ciceri) capable of nodulating Cicer arietinumQ34614136
Burkholderia species are the most common and preferred nodulating symbionts of the Piptadenia group (tribe Mimoseae)Q34730512
Coordinating nodule morphogenesis with rhizobial infection in legumes.Q34774796
Bradyrhizobium elkanii, Bradyrhizobium yuanmingense and Bradyrhizobium japonicum are the main rhizobia associated with Vigna unguiculata and Vigna radiata in the subtropical region of China.Q34787471
South african papilionoid legumes are nodulated by diverse burkholderia with unique nodulation and nitrogen-fixation LociQ34848369
Burkholderia spp. are the most competitive symbionts of Mimosa, particularly under N-limited conditions.Q34890324
Core and symbiotic genes reveal nine Mesorhizobium genospecies and three symbiotic lineages among the rhizobia nodulating Cicer canariense in its natural habitat (La Palma, Canary Islands).Q35030811
Genome sequence of the Lotus spp. microsymbiont Mesorhizobium loti strain R7AQ35101967
Rapid in situ evolution of nodulating strains for Biserrula pelecinus L. through lateral transfer of a symbiosis island from the original mesorhizobial inoculantQ35130037
Disparate origins of Bradyrhizobium symbionts for invasive populations of Cytisus scoparius (Leguminosae) in North AmericaQ35142558
BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisonsQ35185871
Distribution and diversity of rhizobia associated with wild soybean (Glycine soja Sieb. & Zucc.) in Northwest ChinaQ35211290
Symbiotic diversity, specificity and distribution of rhizobia in native legumes of the Core Cape Subregion (South Africa).Q35575934
Recombination and horizontal transfer of nodulation and ACC deaminase (acdS) genes within Alpha- and Betaproteobacteria nodulating legumes of the Cape Fynbos biome.Q35798080
Characterization of the papilionoid-Burkholderia interaction in the Fynbos biome: The diversity and distribution of beta-rhizobia nodulating Podalyria calyptrata (Fabaceae, Podalyrieae).Q35874207
Biodiversity and biogeography of rhizobia associated with common bean (Phaseolus vulgaris L.) in Shaanxi ProvinceQ35953487
The common nodABC genes of Rhizobium meliloti are host-range determinants.Q37092044
Roots, nitrogen transformations, and ecosystem servicesQ37150338
Evolution of tree nutritionQ37767954
Symbiosis specificity in the legume: rhizobial mutualismQ37968308
Glutamine synthetase in legumes: recent advances in enzyme structure and functional genomicsQ38040102
Symbiosis within Symbiosis: Evolving Nitrogen-Fixing Legume SymbiontsQ38650063
Diversity of Bradyrhizobium strains nodulating Lupinus micranthus on both sides of the Western Mediterranean: Algeria and SpainQ38917547
Characterization of Bradyrhizobium species isolated from root nodules of Cytisus villosus grown in MoroccoQ38936748
Rhizobial Diversity and Nodulation Characteristics of the Extremely Promiscuous Legume Sophora flavescensQ38961882
Evolutionary persistence of tripartite integrative and conjugative elements.Q39409937
Multi locus sequence analysis and symbiotic characterization of novel Ensifer strains nodulating Tephrosia spp. in the Indian Thar DesertQ39505693
A new clade of Mesorhizobium nodulating Alhagi sparsifolia.Q39584022
European origin of Bradyrhizobium populations infecting lupins and serradella in soils of Western Australia and South AfricaQ39801623
Characterization of strains unlike Mesorhizobium loti that nodulate lotus spp. in saline soils of Granada, Spain.Q41517351
Diverse novel mesorhizobia nodulate New Zealand native Sophora speciesQ41700545
Genetic diversity and host range of rhizobia nodulating Lotus tenuis in typical soils of the Salado River Basin (Argentina).Q41825831
Complete Genome Sequence of Mesorhizobium ciceri Strain CC1192, an Efficient Nitrogen-Fixing Microsymbiont of Cicer arietinumQ42186212
Genetic Characterization of Soybean Rhizobia Isolated from Different Ecological Zones in North-Eastern AfghanistanQ42293471
Bradyrhizobium spp. and Sinorhizobium fredii are predominant in root nodules of Vigna angularis, a native legume crop in the subtropical region of ChinaQ42625792
Different Mesorhizobium species sharing the same symbiotic genes nodulate the shrub legume Anagyris latifolia.Q42629895
Diversity and specificity of Rhizobium leguminosarum biovar viciae on wild and cultivated legumesQ42631116
Evidence of horizontal transfer of symbiotic genes from a Bradyrhizobium japonicum inoculant strain to indigenous diazotrophs Sinorhizobium (Ensifer) fredii and Bradyrhizobium elkanii in a Brazilian Savannah soilQ42845825
Genetic diversity and community structure of rhizobia nodulating Sesbania cannabina in saline-alkaline soils.Q43959619
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P433issue7
P407language of work or nameEnglishQ1860
P304page(s)321
P577publication date2018-06-27
P1433published inGenesQ5532699
P1476titleHorizontal Transfer of Symbiosis Genes within and Between Rhizobial Genera: Occurrence and Importance
P478volume9

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cites work (P2860)
Q92609371Diversity of Bradyrhizobium in Non-Leguminous Sorghum Plants: B. ottawaense Isolates Unique in Genes for N2O Reductase and Lack of the Type VI Secretion System
Q58095113Evidence for diversifying selection of genetic regions of encoding putative collagen-like host-adhesive fibers in Pasteuria penetrans
Q90631760Experimental Evolution of Legume Symbionts: What Have We Learnt?
Q92537745Formulation of a Highly Effective Inoculant for Common Bean Based on an Autochthonous Elite Strain of Rhizobium leguminosarum bv. phaseoli, and Genomic-Based Insights Into Its Agronomic Performance
Q90338782Genetic Interaction Studies Reveal Superior Performance of Rhizobium tropici CIAT899 on a Range of Diverse East African Common Bean (Phaseolus vulgaris L.) Genotypes
Q89924053Genomic insight into the origins and evolution of symbiosis genes in Phaseolus vulgaris microsymbionts
Q57093118Inoculation of YH1 Leads to Reduced Metal Uptake for Grown in Mine Tailings and Metal-Polluted Soils
Q64078798Phylogenomic Species Are Structured by a Continuum of Diversity and Genomic Clusters
Q64268516Soybean-Nodulating Strains With Low Intrinsic Competitiveness for Nodulation, Good Symbiotic Performance, and Stress-Tolerance Isolated From Soybean-Cropped Soils in Argentina
Q90355826Symbiosis genes show a unique pattern of introgression and selection within a Rhizobium leguminosarum species complex

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