Single-cell mapping of the thymic stroma identifies IL-25-producing tuft epithelial cells

scientific article published in Nature

Single-cell mapping of the thymic stroma identifies IL-25-producing tuft epithelial cells is …
instance of (P31):
scholarly articleQ13442814

External links are
P8978DBLP publication IDjournals/nature/BornsteinNGKPGD18
P6179Dimensions Publication ID1105646341
P356DOI10.1038/S41586-018-0346-1
P1325external data available at URLhttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE103970
P698PubMed publication ID30022162

P50authorShalev ItzkovitzQ88129198
Eyal DavidQ89108175
Amir GiladiQ89144508
Jakub AbramsonQ91718581
Philippe JayQ55719070
P2093author name stringNaomi Taylor
Anna Chuprin
Valérie S Zimmermann
François Gerbe
Marie Pouzolles
Beáta Tóth
Chamutal Bornstein
Shir Nevo
Ori Goldberg
Noam Kadouri
Alice Machado
P2860cites workUltrafast and memory-efficient alignment of short DNA sequences to the human genomeQ21183894
Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identitiesQ24617969
Positive and negative selection of the T cell repertoire: what thymocytes see (and don't see)Q29391777
Computational assignment of cell-cycle stage from single-cell transcriptome dataQ30978560
HISAT: a fast spliced aligner with low memory requirementsQ34043398
Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome positionQ34375601
Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell typesQ34404570
Intestinal epithelial tuft cells initiate type 2 mucosal immunity to helminth parasitesQ34508838
Population and single-cell genomics reveal the Aire dependency, relief from Polycomb silencing, and distribution of self-antigen expression in thymic epitheliaQ34590391
Distinct ATOH1 and Neurog3 requirements define tuft cells as a new secretory cell type in the intestinal epithelium.Q34637873
ATAC-seq: A Method for Assaying Chromatin Accessibility Genome-WideQ35220268
Immunogenetics. Chromatin state dynamics during blood formationQ35546671
The Spectrum and Regulatory Landscape of Intestinal Innate Lymphoid Cells Are Shaped by the MicrobiomeQ36108549
Aire controls gene expression in the thymic epithelium with ordered stochasticityQ36247031
Single-cell transcriptome analysis reveals coordinated ectopic gene-expression patterns in medullary thymic epithelial cellsQ36363466
Sry HMG box protein 9-positive (Sox9+) epithelial cell adhesion molecule-negative (EpCAM-) biphenotypic cells derived from hepatocytes are involved in mouse liver regeneration.Q38268256
Positive-selection-inducing self-peptides displayed by cortical thymic epithelial cellsQ38319419
Thymic Epithelial Cells.Q39146778
Generation of diversity in thymic epithelial cells.Q39187317
Transcriptional Heterogeneity and Lineage Commitment in Myeloid ProgenitorsQ40252079
Corticosteroids regulate epithelial cell differentiation and Hassall body formation in the human thymusQ44701520
Single-molecule mRNA detection and counting in mammalian tissue.Q47770514
Characterization and expression analysis of the Spink5 gene, the mouse ortholog of the defective gene in Netherton syndromeQ48145703
Multilineage potential and self-renewal define an epithelial progenitor cell population in the adult thymus.Q50640787
P4510describes a project that usesthymusQ163987
P433issue7715
P407language of work or nameEnglishQ1860
P921main subjectsingle cell transcriptomicsQ105406038
P304page(s)622-626
P577publication date2018-07-18
P1433published inNatureQ180445
P1476titleSingle-cell mapping of the thymic stroma identifies IL-25-producing tuft epithelial cells
P478volume559

Reverse relations

cites work (P2860)
Q89808480A cell atlas of human thymic development defines T cell repertoire formation
Q98729312A novel method to identify Post-Aire stages of medullary thymic epithelial cell differentiation
Q98178412Acetylcholine From Tuft Cells: The Updated Insights Beyond Its Immune and Chemosensory Functions
Q98718621Ageing compromises mouse thymus function and remodels epithelial cell differentiation
Q57181208Deconstructing deployment of the innate immune lymphocyte army for barrier homeostasis and protection
Q97692671Differential expression of tissue-restricted antigens among mTEC is associated with distinct autoreactive T cell fates
Q94521577Diversity in medullary thymic epithelial cells controls the activity and availability of iNKT cells
Q98665284Fibroblasts as a source of self-antigens for central immune tolerance
Q90479663Gender Disparity Impacts on Thymus Aging and LHRH Receptor Antagonist-Induced Thymic Reconstitution Following Chemotherapeutic Damage
Q95841014Generation and Regeneration of Thymic Epithelial Cells
Q90040247Insights into Thymus Development and Viral Thymic Infections
Q90524051Introducing … thymic tuft cells
Q64108792MARS-seq2.0: an experimental and analytical pipeline for indexed sorting combined with single-cell RNA sequencing
Q96126802Mouse intestinal tuft cells express advillin but not villin
Q91619411Myc controls a distinct transcriptional program in fetal thymic epithelial cells that determines thymus growth
Q104459140Reconstitution of a functional human thymus by postnatal stromal progenitor cells and natural whole-organ scaffolds
Q92199323Regulation of immune responses by tuft cells
Q90573900Regulatory T Cell Development in the Thymus
Q92537459Suppression of ILC2 differentiation from committed T cell precursors by E protein transcription factors
Q93158317The IL-17 Family of Cytokines in Health and Disease
Q91725370The Immune Function of Tuft Cells at Gut Mucosal Surfaces and Beyond
Q89820605Thymic Epithelial Cells Contribute to Thymopoiesis and T Cell Development
Q91718584Thymic epithelial cell heterogeneity: TEC by TEC
Q91045855Thymic regulatory T cells arise via two distinct developmental programs
Q93371103Thymus machinery for T-cell selection
Q94599497Toll-like receptor signaling in thymic epithelium controls monocyte-derived dendritic cell recruitment and Treg generation
Q89964422Tuft Cell Formation Reflects Epithelial Plasticity in Pancreatic Injury: Implications for Modeling Human Pancreatitis

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