| scholarly article | Q13442814 |
| P819 | ADS bibcode | 2018PNAS..11512453B |
| P356 | DOI | 10.1073/PNAS.1810582115 |
| P932 | PMC publication ID | 6310815 |
| P698 | PubMed publication ID | 30541889 |
| P50 | author | Clara Bourbousse | Q63953212 |
| Julie A. Law | Q64815016 | ||
| P2093 | author name string | Neeraja Vegesna | |
| P2860 | cites work | The transcription factor p53: not a repressor, solely an activator | Q24273295 |
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| Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities | Q24617969 | ||
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| Replication factor C1 (RFC1) is required for double-strand break repair during meiotic homologous recombination in Arabidopsis. | Q51311138 | ||
| The Arabidopsis thaliana MND1 homologue plays a key role in meiotic homologous pairing, synapsis and recombination. | Q51800799 | ||
| Atmnd1-delta1 is sensitive to gamma-irradiation and defective in meiotic DNA repair. | Q51821595 | ||
| Mutations in MYB3R1 and MYB3R4 cause pleiotropic developmental defects and preferential down-regulation of multiple G2/M-specific genes in Arabidopsis. | Q51856599 | ||
| DNA Damage-Induced Transcription of Transposable Elements and Long Non-coding RNAs in Arabidopsis Is Rare and ATM-Dependent. | Q52852699 | ||
| Microarray analysis of genes that respond to gamma-irradiation in Arabidopsis. | Q54367776 | ||
| A Novel cis-Acting Element in Promoters of Plant B-Type Cyclin Genes Activates M Phase Specific Transcription | Q58620881 | ||
| Kinetic analysis of DNA double-strand break repair pathways in Arabidopsis | Q64386824 | ||
| ATR and ATM play both distinct and additive roles in response to ionizing radiation | Q79570664 | ||
| AGRIS and AtRegNet. a platform to link cis-regulatory elements and transcription factors into regulatory networks | Q82766604 | ||
| AGRIS: Arabidopsis gene regulatory information server, an information resource of Arabidopsis cis-regulatory elements and transcription factors | Q24790976 | ||
| DNA damage and repair in plants - from models to crops | Q26777937 | ||
| Role of DNA polymerase κ in the maintenance of genomic stability | Q26827585 | ||
| DNA glycosylases: in DNA repair and beyond | Q26830166 | ||
| Quantifying similarity between motifs | Q27499384 | ||
| Fitting a mixture model by expectation maximization to discover motifs in biopolymers | Q27860556 | ||
| Fast gapped-read alignment with Bowtie 2 | Q27860699 | ||
| The DNA Damage Response: Making It Safe to Play with Knives | Q27861055 | ||
| SOG1: a master regulator of the DNA damage response in plants | Q28086857 | ||
| deepTools2: a next generation web server for deep-sequencing data analysis | Q28597770 | ||
| MEME SUITE: tools for motif discovery and searching | Q29547204 | ||
| REVIGO summarizes and visualizes long lists of gene ontology terms | Q29614817 | ||
| STAR: ultrafast universal RNA-seq aligner | Q29615052 | ||
| GO::TermFinder--open source software for accessing Gene Ontology information and finding significantly enriched Gene Ontology terms associated with a list of genes | Q29616254 | ||
| DREM 2.0: Improved reconstruction of dynamic regulatory networks from time-series expression data | Q30557846 | ||
| PANTHER version 11: expanded annotation data from Gene Ontology and Reactome pathways, and data analysis tool enhancements | Q31145457 | ||
| Microbial pathogens trigger host DNA double-strand breaks whose abundance is reduced by plant defense responses | Q31156407 | ||
| ATM-mediated transcriptional and developmental responses to gamma-rays in Arabidopsis | Q33283998 | ||
| VennMaster: area-proportional Euler diagrams for functional GO analysis of microarrays | Q33317083 | ||
| Suppressor of gamma response 1 (SOG1) encodes a putative transcription factor governing multiple responses to DNA damage | Q33347320 | ||
| Xrcc1-dependent and Ku-dependent DNA double-strand break repair kinetics in Arabidopsis plants | Q33350093 | ||
| GMI1, a structural-maintenance-of-chromosomes-hinge domain-containing protein, is involved in somatic homologous recombination in Arabidopsis | Q33350950 | ||
| Arabidopsis thaliana thymidine kinase 1a is ubiquitously expressed during development and contributes to confer tolerance to genotoxic stress. | Q33359756 | ||
| DNA double-strand breaks induce the expression of flavin-containing monooxygenase and reduce root meristem size in Arabidopsis thaliana | Q33360831 | ||
| Aluminum-Dependent Terminal Differentiation of the Arabidopsis Root Tip Is Mediated through an ATR-, ALT2-, and SOG1-Regulated Transcriptional Response | Q33361380 | ||
| Ionizing radiation-dependent gamma-H2AX focus formation requires ataxia telangiectasia mutated and ataxia telangiectasia mutated and Rad3-related | Q33768588 | ||
| Posttranslational modification of p53: cooperative integrators of function | Q33899450 | ||
| High atomic weight, high-energy radiation (HZE) induces transcriptional responses shared with conventional stresses in addition to a core "DSB" response specific to clastogenic treatments | Q33984747 | ||
| A novel ATM-dependent X-ray-inducible gene is essential for both plant meiosis and gametogenesis | Q34086616 | ||
| Two thymidine kinases and one multisubstrate deoxyribonucleoside kinase salvage DNA precursors in Arabidopsis thaliana | Q34294341 | ||
| Kinetic transcriptomic approach revealed metabolic pathways and genotoxic-related changes implied in the Arabidopsis response to ionising radiations | Q34393189 | ||
| AGRIS: the Arabidopsis Gene Regulatory Information Server, an update. | Q34456259 | ||
| The importance of safeguarding genome integrity in germination and seed longevity | Q34466205 | ||
| Error-Prone Repair of DNA Double-Strand Breaks | Q34478858 | ||
| A DNA-Damage-Induced Cell Cycle Checkpoint in Arabidopsis | Q34617658 | ||
| Programmed induction of endoreduplication by DNA double-strand breaks in Arabidopsis | Q35049063 | ||
| Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana | Q35148365 | ||
| Araport: the Arabidopsis information portal | Q35254350 | ||
| Transcriptional repression by MYB3R proteins regulates plant organ growth. | Q36000823 | ||
| NAC transcription factors in plant multiple abiotic stress responses: progress and prospects | Q36221342 | ||
| A novel plant gene essential for meiosis is related to the human CtIP and the yeast COM1/SAE2 gene | Q36274706 | ||
| Recent advances in understanding of the DNA double-strand break repair machinery of plants. | Q36275861 | ||
| C-terminal domains of a histone demethylase interact with a pair of transcription factors and mediate specific chromatin association. | Q36318756 | ||
| The DNA replication factor RFC1 is required for interference-sensitive meiotic crossovers in Arabidopsis thaliana | Q36384393 | ||
| Cellular responses to DNA damage: one signal, multiple choices | Q36521810 | ||
| Global genomic profiling reveals an extensive p53-regulated autophagy program contributing to key p53 responses | Q36850426 | ||
| FANCJ at the FORK. | Q36952290 | ||
| Signaling of double strand breaks and deprotected telomeres in Arabidopsis | Q37231534 | ||
| Reshaping chromatin after DNA damage: the choreography of histone proteins | Q37418010 | ||
| Mechanisms of dNTP supply that play an essential role in maintaining genome integrity in eukaryotic cells | Q37793347 | ||
| Systemic acquired resistance: turning local infection into global defense | Q38078418 | ||
| The ATM protein kinase: regulating the cellular response to genotoxic stress, and more | Q38088935 | ||
| Causes of genome instability | Q38126068 | ||
| DNA recombination in somatic plant cells: mechanisms and evolutionary consequences | Q38208654 | ||
| DNA damage response in plants: conserved and variable response compared to animals | Q38212164 | ||
| Reconstructing dynamic regulatory maps | Q38305740 | ||
| The DP-E2F-like gene DEL1 controls the endocycle in Arabidopsis thaliana | Q38332078 | ||
| Antioxidant response of Arabidopsis plants to gamma irradiation: Genome-wide expression profiling of the ROS scavenging and signal transduction pathways | Q38334403 | ||
| A shared DNA-damage-response pathway for induction of stem-cell death by UVB and by gamma irradiation | Q38342454 | ||
| Differentially expressed genes in response to gamma-irradiation during the vegetative stage in Arabidopsis thaliana | Q38480789 | ||
| Transcriptomic profile of Arabidopsis rosette leaves during the reproductive stage after exposure to ionizing radiation | Q38504748 | ||
| Mechanisms Used by Plants to Cope with DNA Damage | Q38665101 | ||
| Census and evaluation of p53 target genes. | Q38911126 | ||
| Functional Conservation in the SIAMESE-RELATED Family of Cyclin-Dependent Kinase Inhibitors in Land Plants. | Q40346492 | ||
| UV-B inhibition of hypocotyl growth in etiolated Arabidopsis thaliana seedlings is a consequence of cell cycle arrest initiated by photodimer accumulation | Q40671593 | ||
| Thymidine kinases share a conserved function for nucleotide salvage and play an essential role in Arabidopsis thaliana growth and development | Q40771681 | ||
| The plant-specific CDKB1-CYCB1 complex mediates homologous recombination repair in Arabidopsis | Q41292927 | ||
| Deficiency of the Arabidopsis helicase RTEL1 triggers a SOG1-dependent replication checkpoint in response to DNA cross-links. | Q41571878 | ||
| Arabidopsis R1R2R3-Myb proteins are essential for inhibiting cell division in response to DNA damage | Q41693715 | ||
| Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. | Q42122566 | ||
| ATM-mediated phosphorylation of SOG1 is essential for the DNA damage response in Arabidopsis. | Q42154715 | ||
| p21 governs p53's repressive side. | Q42369893 | ||
| Simplify p53: just an activator | Q42655448 | ||
| The Arabidopsis SIAMESE-RELATED cyclin-dependent kinase inhibitors SMR5 and SMR7 regulate the DNA damage checkpoint in response to reactive oxygen species | Q43559863 | ||
| Biochemical characterization of AtRECQ3 reveals significant differences relative to other RecQ helicases | Q43881686 | ||
| Genome-wide analysis of the core DNA replication machinery in the higher plants Arabidopsis and rice | Q44870615 | ||
| Arabidopsis thaliana AtPOLK encodes a DinB-like DNA polymerase that extends mispaired primer termini and is highly expressed in a variety of tissues | Q44939272 | ||
| A role for small RNAs in DNA double-strand break repair. | Q45345570 | ||
| Epigenetic regulation, somatic homologous recombination, and abscisic acid signaling are influenced by DNA polymerase epsilon mutation in Arabidopsis | Q46108770 | ||
| The Rad17 homologue of Arabidopsis is involved in the regulation of DNA damage repair and homologous recombination. | Q47425283 | ||
| Putting p53 in Context | Q47833426 | ||
| Function of the Plant DNA Polymerase Epsilon in Replicative Stress Sensing, a Genetic Analysis | Q47987433 | ||
| Arabidopsis ribonucleotide reductases are critical for cell cycle progression, DNA damage repair, and plant development | Q48105213 | ||
| Increased Phosphorylation of Ser-Gln Sites on SUPPRESSOR OF GAMMA RESPONSE1 Strengthens the DNA Damage Response in Arabidopsis thaliana | Q48173189 | ||
| AHP2 is required for bivalent formation and for segregation of homologous chromosomes in Arabidopsis meiosis | Q48228483 | ||
| Scaffolding for Repair: Understanding Molecular Functions of the SMC5/6 Complex | Q48253217 | ||
| G2/M-phase-specific transcription during the plant cell cycle is mediated by c-Myb-like transcription factors | Q48349757 | ||
| Functional analysis of cyclin-dependent kinase inhibitors of Arabidopsis | Q48354142 | ||
| Global analysis of the core cell cycle regulators of Arabidopsis identifies novel genes, reveals multiple and highly specific profiles of expression and provides a coherent model for plant cell cycle control | Q48551469 | ||
| Arabidopsis WEE1 kinase controls cell cycle arrest in response to activation of the DNA integrity checkpoint. | Q49065118 | ||
| Identifying the target genes of SUPPRESSOR OF GAMMA RESPONSE 1, a master transcription factor controlling DNA damage response in Arabidopsis. | Q50071297 | ||
| P275 | copyright license | Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International | Q24082749 |
| P6216 | copyright status | copyrighted | Q50423863 |
| P4510 | describes a project that uses | Cytoscape | Q3699942 |
| P433 | issue | 52 | |
| P407 | language of work or name | English | Q1860 |
| P304 | page(s) | E12453-E12462 | |
| P577 | publication date | 2018-12-12 | |
| P1433 | published in | Proceedings of the National Academy of Sciences of the United States of America | Q1146531 |
| P1476 | title | SOG1 activator and MYB3R repressors regulate a complex DNA damage network in Arabidopsis | |
| P478 | volume | 115 |
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