review article | Q7318358 |
scholarly article | Q13442814 |
P356 | DOI | 10.1007/S00249-008-0367-Z |
P698 | PubMed publication ID | 18807026 |
P50 | author | Peter Güntert | Q30158282 |
P2860 | cites work | Application of neural networks to automated assignment of NMR spectra of proteins. | Q52384937 |
Automation of protein 2D proton NMR assignment by means of fuzzy mathematics and graph theory. | Q52391773 | ||
Protein heteronuclear NMR assignments using mean-field simulated annealing. | Q54569523 | ||
SANE (Structure Assisted NOE Evaluation): an automated model-based approach for NOE assignment | Q57078228 | ||
CAMRA: chemical shift based computer aided protein NMR assignments | Q58234179 | ||
Automated assignment of NOESY NMR spectra using a knowledge based method (KNOWNOE) | Q62493660 | ||
Automated and semiautomated analysis of homo- and heteronuclear multidimensional nuclear magnetic resonance spectra of proteins: the program Pronto | Q72431345 | ||
An efficient high-throughput resonance assignment procedure for structural genomics and protein folding research by NMR | Q77320685 | ||
Protein sequential resonance assignments by combinatorial enumeration using 13C alpha chemical shifts and their (i, i-1) sequential connectivities | Q78422163 | ||
NOE assignment with ARIA 2.0: the nuts and bolts | Q80468336 | ||
The Protein Data Bank | Q24515306 | ||
Consistent blind protein structure generation from NMR chemical shift data | Q24657929 | ||
GANA--a genetic algorithm for NMR backbone resonance assignment | Q24812463 | ||
Automated NOESY interpretation with ambiguous distance restraints: the refined NMR solution structure of the pleckstrin homology domain from beta-spectrin | Q27739804 | ||
Using NMRView to visualize and analyze the NMR spectra of macromolecules | Q27860567 | ||
The 13C chemical-shift index: a simple method for the identification of protein secondary structure using 13C chemical-shift data | Q27860592 | ||
Protein NMR structure determination with automated NOE assignment using the new software CANDID and the torsion angle dynamics algorithm DYANA | Q27860611 | ||
Refinement of protein structures in explicit solvent | Q27860639 | ||
Automated NMR structure calculation with CYANA | Q27860754 | ||
Torsion angle dynamics for NMR structure calculation with the new program DYANA | Q27860808 | ||
NMRPipe: a multidimensional spectral processing system based on UNIX pipes | Q27860859 | ||
NMR View: A computer program for the visualization and analysis of NMR data | Q27860951 | ||
The program XEASY for computer-supported NMR spectral analysis of biological macromolecules | Q27860993 | ||
Protein backbone angle restraints from searching a database for chemical shift and sequence homology | Q27861108 | ||
Completely automated, highly error-tolerant macromolecular structure determination from multidimensional nuclear overhauser enhancement spectra and chemical shift assignments | Q28262291 | ||
ARIA2: automated NOE assignment and data integration in NMR structure calculation | Q28275170 | ||
RECOORD: a recalculated coordinate database of 500+ proteins from the PDB using restraints from the BioMagResBank | Q29614749 | ||
Assembly of protein tertiary structures from fragments with similar local sequences using simulated annealing and Bayesian scoring functions | Q29616398 | ||
A two-dimensional nuclear Overhauser enhancement (2D NOE) experiment for the elucidation of complete proton-proton cross-relaxation networks in biological macromolecules | Q29616473 | ||
Protein NMR structure determination with automated NOE-identification in the NOESY spectra using the new software ATNOS | Q29617863 | ||
ARIA: automated NOE assignment and NMR structure calculation | Q29620311 | ||
The NOESY jigsaw: automated protein secondary structure and main-chain assignment from sparse, unassigned NMR data. | Q30327594 | ||
The direct determination of protein structure by NMR without assignment. | Q30329287 | ||
Protein structure elucidation from NMR proton densities. | Q30330309 | ||
Influence of the completeness of chemical shift assignments on NMR structures obtained with automated NOE assignment. | Q30336300 | ||
Automation of NMR structure determination of proteins. | Q30343738 | ||
More reliable protein NMR peak assignment via improved 2-interval scheduling. | Q30350375 | ||
An integrated platform for automated analysis of protein NMR structures. | Q30350474 | ||
A random graph approach to NMR sequential assignment. | Q30351267 | ||
Toward high-resolution de novo structure prediction for small proteins. | Q30351393 | ||
An efficient randomized algorithm for contact-based NMR backbone resonance assignment. | Q30351820 | ||
CASA: an efficient automated assignment of protein mainchain NMR data using an ordered tree search algorithm. | Q30352156 | ||
A topology-constrained distance network algorithm for protein structure determination from NOESY data. | Q30352330 | ||
Optimal isotope labelling for NMR protein structure determinations. | Q30353197 | ||
Fully automated structure determinations of the Fes SH2 domain using different sets of NMR spectra. | Q30355379 | ||
An automated assignment-free Bayesian approach for accurately identifying proton contacts from NOESY data. | Q30357187 | ||
Automated protein structure determination from NMR spectra. | Q30357194 | ||
Efficient analysis of protein 2D NMR spectra using the software packageEASY | Q30359566 | ||
Protein structure determination from NMR chemical shifts | Q30362013 | ||
KUJIRA, a package of integrated modules for systematic and interactive analysis of NMR data directed to high-throughput NMR structure studies. | Q30362931 | ||
Automated combined assignment of NOESY spectra and three-dimensional protein structure determination | Q30429430 | ||
Automatic determination of protein backbone resonance assignments from triple resonance nuclear magnetic resonance data | Q30656748 | ||
Rapid protein fold determination using unassigned NMR data | Q30885931 | ||
Rapid NMR data collection | Q30986391 | ||
AutoLink: automated sequential resonance assignment of biopolymers from NMR data by relative-hypothesis-prioritization-based simulated logic | Q30986444 | ||
SideLink: automated side-chain assignment of biopolymers from NMR data by relative-hypothesis-prioritization-based simulated logic | Q31037615 | ||
De novo determination of protein backbone structure from residual dipolar couplings using Rosetta | Q31042172 | ||
Inferential backbone assignment for sparse data | Q31049370 | ||
A relational database for sequence-specific protein NMR data | Q31152811 | ||
Automated analysis of NMR assignments and structures for proteins. | Q33745471 | ||
CLOUDS, a protocol for deriving a molecular proton density via NMR. | Q34067316 | ||
Protein backbone chemical shifts predicted from searching a database for torsion angle and sequence homology | Q34645831 | ||
Determination of protein backbone structures from residual dipolar couplings | Q35659284 | ||
Automated analysis of protein NMR assignments and structures | Q35860146 | ||
Solution structure of the rhodanese homology domain At4g01050(175-295) from Arabidopsis thaliana | Q36476774 | ||
Protein three-dimensional structure determination and sequence-specific assignment of 13C and 15N-separated NOE data. A novel real-space ab initio approach | Q36676576 | ||
The new program OPAL for molecular dynamics simulations and energy refinements of biological macromolecules | Q36831940 | ||
A computer-based protocol for semiautomated assignments and 3D structure determination of proteins | Q41507239 | ||
Reconsidering complete search algorithms for protein backbone NMR assignment | Q42669848 | ||
A novel protocol based on HN(C)N for rapid resonance assignment in ((15)N, (13)C) labeled proteins: implications to structural genomics | Q44020873 | ||
MONTE: An automated Monte Carlo based approach to nuclear magnetic resonance assignment of proteins | Q44302556 | ||
Automated assignment of simulated and experimental NOESY spectra of proteins by feedback filtering and self-correcting distance geometry | Q44523047 | ||
Application of distance geometry to the proton assignment problem. | Q45955835 | ||
Solution structure of the Src homology 2 domain from the human feline sarcoma oncogene Fes. | Q46521592 | ||
Simultaneous assignment and structure determination of protein backbones by using NMR dipolar couplings | Q47279262 | ||
New methods for fast multidimensional NMR. | Q47639093 | ||
A general Bayesian method for an automated signal class recognition in 2D NMR spectra combined with a multivariate discriminant analysis. | Q47740632 | ||
Automated sequence-specific NMR assignment of homologous proteins using the program GARANT. | Q47740850 | ||
AURELIA, a program for computer-aided analysis of multidimensional NMR spectra. | Q47740933 | ||
Tools for the automated assignment of high-resolution three-dimensional protein NMR spectra based on pattern recognition techniques | Q47791242 | ||
PACES: Protein sequential assignment by computer-assisted exhaustive search. | Q47888374 | ||
NMR assignment of the hypothetical ENTH-VHS domain At3g16270 from Arabidopsis thaliana | Q47968099 | ||
Automated backbone assignment of labeled proteins using the threshold accepting algorithm | Q48005168 | ||
Fully automated sequence-specific resonance assignments of hetero- nuclear protein spectra. | Q50493587 | ||
A common sense approach to peak picking in two-, three-, and four-dimensional spectra using automatic computer analysis of contour diagrams. 1991. | Q51479050 | ||
Automated NMR structure determination of stereo-array isotope labeled ubiquitin from minimal sets of spectra using the SAIL-FLYA system. | Q51812292 | ||
Automated sequence-specific protein NMR assignment using the memetic algorithm MATCH. | Q51877664 | ||
Automated structure determination of proteins with the SAIL-FLYA NMR method. | Q51900357 | ||
RIBRA--an error-tolerant algorithm for the NMR backbone assignment problem. | Q51944576 | ||
PASA--a program for automated protein NMR backbone signal assignment by pattern-filtering approach. | Q51948742 | ||
Automated protein NMR structure determination using wavelet de-noised NOESY spectra. | Q51958783 | ||
Probabilistic Identification of Spin Systems and their Assignments including Coil-Helix Inference as Output (PISTACHIO). | Q51965256 | ||
A generalized approach to automated NMR peak list editing: application to reduced dimensionality triple resonance spectra. | Q51988599 | ||
Semiautomatic sequence-specific assignment of proteins based on the tertiary structure--the program st2nmr. | Q52044303 | ||
Sequence-specific NMR assignment of proteins by global fragment mapping with the program MAPPER. | Q52070463 | ||
A tracked approach for automated NMR assignments in proteins (TATAPRO). | Q52075975 | ||
Automated peak picking and peak integration in macromolecular NMR spectra using AUTOPSY. | Q52228034 | ||
Using neural network predicted secondary structure information in automatic protein NMR assignment. | Q52252858 | ||
Automated analysis of protein NMR assignments using methods from artificial intelligence. | Q52261972 | ||
Automated resonance assignment of proteins using heteronuclear 3D NMR. 2. Side chain and sequence-specific assignment. | Q52265642 | ||
Automated probabilistic method for assigning backbone resonances of (13C,15N)-labeled proteins. | Q52275950 | ||
Calculation of protein structures with ambiguous distance restraints. Automated assignment of ambiguous NOE crosspeaks and disulphide connectivities. | Q52350736 | ||
An automated procedure for the assignment of protein 1HN, 15N, 13C alpha, 1H alpha, 13C beta and 1H beta resonances. | Q52372023 | ||
Bayesian signal extraction from noisy FT NMR spectra. | Q52374133 | ||
Evaluation of an algorithm for the automated sequential assignment of protein backbone resonances: a demonstration of the connectivity tracing assignment tools (CONTRAST) software package. | Q52378295 | ||
Use of fuzzy mathematics for complete automated assignment of peptide 1H 2D NMR spectra. | Q52384894 | ||
P433 | issue | 2 | |
P304 | page(s) | 129-143 | |
P577 | publication date | 2008-09-20 | |
P1433 | published in | European Biophysics Journal | Q5412316 |
P1476 | title | Automated structure determination from NMR spectra | |
P478 | volume | 38 |
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