| scholarly article | Q13442814 |
| P50 | author | Alfred Simkin | Q89505431 |
| Andrew Grimson | Q89505433 | ||
| P2093 | author name string | Rene Geissler | |
| Alexa B R McIntyre | |||
| P2860 | cites work | MiRNA-directed regulation of VEGF and other angiogenic factors under hypoxia | Q21092263 |
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| Weak seed-pairing stability and high target-site abundance decrease the proficiency of lsy-6 and other microRNAs | Q24635151 | ||
| A mammalian microRNA expression atlas based on small RNA library sequencing | Q24644709 | ||
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| A microRNA imparts robustness against environmental fluctuation during development | Q24652678 | ||
| Most mammalian mRNAs are conserved targets of microRNAs | Q24655061 | ||
| The human genome browser at UCSC | Q24672361 | ||
| Prediction of mammalian microRNA targets | Q27860498 | ||
| Combinatorial microRNA target predictions | Q27860510 | ||
| Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets | Q27860792 | ||
| Identification of tissue-specific microRNAs from mouse | Q27860892 | ||
| Conservation of the sequence and temporal expression of let-7 heterochronic regulatory RNA | Q27861092 | ||
| The Role of microRNAs in the Repeated Parallel Diversification of Lineages of Midas Cichlid Fish from Nicaragua | Q28601461 | ||
| Evolutionary Transitions of MicroRNA-Target Pairs | Q28601464 | ||
| Conservation of transcription factor binding specificities across 600 million years of bilateria evolution | Q28652295 | ||
| miRBase: annotating high confidence microRNAs using deep sequencing data | Q28660701 | ||
| miR-30 Family Controls Proliferation and Differentiation of Intestinal Epithelial Cell Models by Directing a Broad Gene Expression Program That Includes SOX9 and the Ubiquitin Ligase Pathway | Q28828459 | ||
| The widespread impact of mammalian MicroRNAs on mRNA repression and evolution | Q29547173 | ||
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| Animal MicroRNAs confer robustness to gene expression and have a significant impact on 3'UTR evolution | Q29616370 | ||
| Micromanagers of gene expression: the potentially widespread influence of metazoan microRNAs | Q29618428 | ||
| Measuring transcription factor-binding site turnover: a maximum likelihood approach using phylogenies | Q33633469 | ||
| Measuring the evolutionary rewiring of biological networks | Q33799118 | ||
| Inferring the evolutionary history of primate microRNA binding sites: overcoming motif counting biases | Q33801904 | ||
| On the origin of Lake Malawi cichlid species: a population genetic analysis of divergence | Q33826693 | ||
| Understanding functional miRNA-target interactions in vivo by site-specific genome engineering. | Q34086513 | ||
| Assessing the ceRNA hypothesis with quantitative measurements of miRNA and target abundance | Q34418649 | ||
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| Cell-type-specific signatures of microRNAs on target mRNA expression | Q34479693 | ||
| A widespread sequence-specific mRNA decay pathway mediated by hnRNPs A1 and A2/B1 | Q34525395 | ||
| Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures | Q34712340 | ||
| MicroRNA-20a constrains p300-driven myocardial angiogenic transcription by direct targeting of p300. | Q35043713 | ||
| Two decades of miRNA biology: lessons and challenges | Q35210965 | ||
| The birth and death of microRNA genes in Drosophila. | Q51693767 | ||
| miR-146 and miR-155: Two Key Modulators of Immune Response and Tumor Development. | Q52587340 | ||
| MicroRNA duplication accelerates the recruitment of new targets during vertebrate evolution. | Q52671205 | ||
| The evolutionary origin of plant and animal microRNAs. | Q54868727 | ||
| Metazoan MicroRNAs | Q56140779 | ||
| The evolutionary dynamics of microRNAs in domestic mammals | Q59329362 | ||
| Severe Fever With Thrombocytopenia Syndrome Virus-Induced Macrophage Differentiation Is Regulated by miR-146. | Q64914731 | ||
| LPS induces CXCL16 expression in HUVECs through the miR-146a-mediated TLR4 pathway | Q91315019 | ||
| Too Many False Targets for MicroRNAs: Challenges and Pitfalls in Prediction of miRNA Targets and Their Gene Ontology in Model and Non-model Organisms | Q92665985 | ||
| Role of MicroRNA 146a in Regulating Regulatory T Cell Function to Ameliorate Acute Cardiac Rejection in Mice | Q93063212 | ||
| Small RNA sequencing reveals miR-642a-3p as a novel adipocyte-specific microRNA and miR-30 as a key regulator of human adipogenesis | Q35557667 | ||
| Origins and evolution of microRNA genes in plant species | Q35867651 | ||
| High-throughput discovery of post-transcriptional cis-regulatory elements | Q35945592 | ||
| Roles for microRNAs in conferring robustness to biological processes | Q35955737 | ||
| KLF/SP Transcription Factor Family Evolution: Expansion, Diversification, and Innovation in Eukaryotes. | Q36023280 | ||
| Reliable prediction of regulator targets using 12 Drosophila genomes | Q36177431 | ||
| Birth and expression evolution of mammalian microRNA genes. | Q36490019 | ||
| AUUUA is not sufficient to promote poly(A) shortening and degradation of an mRNA: the functional sequence within AU-rich elements may be UUAUUUA(U/A)(U/A). | Q36671510 | ||
| A global view of the selection forces in the evolution of yeast cis-regulation | Q36685014 | ||
| Evolution under canalization and the dual roles of microRNAs: a hypothesis | Q36825575 | ||
| miR-30 promotes thermogenesis and the development of beige fat by targeting RIP140 | Q36926334 | ||
| DNA-binding specificity changes in the evolution of forkhead transcription factors | Q37049525 | ||
| microRNAs in the Same Clusters Evolve to Coordinately Regulate Functionally Related Genes | Q37184672 | ||
| The evolution of evolvability in microRNA target sites in vertebrates | Q37272423 | ||
| MiR-146 and miR-125 in the regulation of innate immunity and inflammation | Q37351181 | ||
| Simulations of enhancer evolution provide mechanistic insights into gene regulation. | Q37428413 | ||
| Evolutionary patterns of metazoan microRNAs reveal targeting principles in the let-7 and miR-10 families. | Q37548509 | ||
| Mechanisms of transcription factor evolution in Metazoa | Q37623770 | ||
| Prediction of human miRNA target genes using computationally reconstructed ancestral mammalian sequences | Q37649440 | ||
| Evolutionary conservation of the eumetazoan gene regulatory landscape | Q37683468 | ||
| Massively parallel functional annotation of 3' untranslated regions | Q37695019 | ||
| Recurrent and recent selective sweeps in the piRNA pathway. | Q37712472 | ||
| Predicting in vivo binding sites of RNA-binding proteins using mRNA secondary structure | Q38344582 | ||
| Comparative analysis of gene regulatory networks: from network reconstruction to evolution | Q38584026 | ||
| microRNA target prediction programs predict many false positives | Q38985844 | ||
| Patterns of evolutionary constraints in intronic and intergenic DNA of Drosophila. | Q40497920 | ||
| Organismal complexity, cell differentiation and gene expression: human over mouse | Q40697023 | ||
| Intermolecular epistasis shaped the function and evolution of an ancient transcription factor and its DNA binding sites | Q41342939 | ||
| A functional selection model explains evolutionary robustness despite plasticity in regulatory networks | Q41505408 | ||
| New microRNAs in Drosophila--birth, death and cycles of adaptive evolution. | Q41888198 | ||
| Deep conservation of microRNA-target relationships and 3'UTR motifs in vertebrates, flies, and nematodes | Q42615447 | ||
| Redefining microRNA targets | Q44748379 | ||
| Deep experimental profiling of microRNA diversity, deployment, and evolution across the Drosophila genus | Q46242674 | ||
| The UCSC Genome Browser database: 2018 update | Q46557670 | ||
| Gene regulatory network growth by duplication | Q47610427 | ||
| Regulation by 3'-Untranslated Regions | Q47884146 | ||
| A Massively Parallel Reporter Assay of 3' UTR Sequences Identifies In Vivo Rules for mRNA Degradation | Q47923903 | ||
| PTRE-seq reveals mechanism and interactions of RNA binding proteins and miRNAs. | Q48204069 | ||
| P275 | copyright license | Creative Commons Attribution 4.0 International | Q20007257 |
| P6216 | copyright status | copyrighted | Q50423863 |
| P433 | issue | 2 | |
| P921 | main subject | Evolutionary dynamics | Q5418700 |
| P304 | page(s) | e1008285 | |
| P577 | publication date | 2020-02-03 | |
| P1433 | published in | PLOS Genetics | Q1893441 |
| P1476 | title | Evolutionary dynamics of microRNA target sites across vertebrate evolution | |
| P478 | volume | 16 |
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