| scholarly article | Q13442814 |
| P818 | arXiv ID | 1909.04781 |
| P356 | DOI | 10.1016/J.BPJ.2019.11.3400 |
| P932 | PMC publication ID | 7063475 |
| P698 | PubMed publication ID | 32032503 |
| P50 | author | J. Andrew McCammon | Q6104601 |
| Padmini Rangamani | Q61473688 | ||
| P2093 | author name string | Rommie E Amaro | |
| Christopher T Lee | |||
| Michael Holst | |||
| Justin G Laughlin | |||
| John B Moody | |||
| P2860 | cites work | Dendritic spine geometry and spine apparatus organization govern the spatiotemporal dynamics of calcium | Q92033485 |
| Geometric principles of second messenger dynamics in dendritic spines | Q92577504 | ||
| The Implementation of the Colored Abstract Simplicial Complex and its Application to Mesh Generation | Q93046436 | ||
| Numerical analysis of Ca2+ signaling in rat ventricular myocytes with realistic transverse-axial tubular geometry and inhibited sarcoplasmic reticulum | Q27334386 | ||
| PDB2PQR: an automated pipeline for the setup of Poisson-Boltzmann electrostatics calculations | Q27861014 | ||
| Modeling effects of L-type ca(2+) current and na(+)-ca(2+) exchanger on ca(2+) trigger flux in rabbit myocytes with realistic T-tubule geometries | Q30525513 | ||
| Enhanced FIB-SEM systems for large-volume 3D imaging | Q33812185 | ||
| The Virtual Cell: a software environment for computational cell biology | Q34392313 | ||
| Quality tetrahedral mesh smoothing via boundary-optimized Delaunay triangulation | Q36372795 | ||
| Multi-scale continuum modeling of biological processes: from molecular electro-diffusion to sub-cellular signaling transduction | Q36682460 | ||
| Feature-preserving surface mesh smoothing via suboptimal Delaunay triangulation | Q36748103 | ||
| Three-dimensional geometric modeling of membrane-bound organelles in ventricular myocytes: bridging the gap between microscopic imaging and mathematical simulation | Q37465446 | ||
| SimVascular: An Open Source Pipeline for Cardiovascular Simulation | Q39033801 | ||
| CellOrganizer: Image-derived models of subcellular organization and protein distribution | Q39368429 | ||
| Decoding information in cell shape | Q42773442 | ||
| Modelling cardiac calcium sparks in a three-dimensional reconstruction of a calcium release unit | Q44920191 | ||
| Feature-preserving adaptive mesh generation for molecular shape modeling and simulation | Q46191035 | ||
| Long-term potentiation expands information content of hippocampal dentate gyrus synapses | Q49790476 | ||
| Fluctuating Finite Element Analysis (FFEA): A continuum mechanics software tool for mesoscale simulation of biomolecules. | Q52640460 | ||
| Computational Modeling Reveals Frequency Modulation of Calcium-cAMP/PKA Pathway in Dendritic Spines | Q91024276 | ||
| P4510 | describes a project that uses | scikit-image | Q22442795 |
| P433 | issue | 5 | |
| P921 | main subject | open-source software | Q1130645 |
| P304 | page(s) | 1003-1008 | |
| P577 | publication date | 2020-01-22 | |
| P1433 | published in | Biophysical Journal | Q2032955 |
| P1476 | title | An Open-Source Mesh Generation Platform for Biophysical Modeling Using Realistic Cellular Geometries | |
| P478 | volume | 118 |
| Q94569790 | Backmapping triangulated surfaces to coarse-grained membrane models | cites work | P2860 |
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