Recent Advances in the Understanding of the Reaction Chemistries of the Heme Catabolizing Enzymes HO and BVR Based on High Resolution Protein Structures

scientific article published on 17 December 2018

Recent Advances in the Understanding of the Reaction Chemistries of the Heme Catabolizing Enzymes HO and BVR Based on High Resolution Protein Structures is …
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scholarly articleQ13442814

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P356DOI10.2174/0929867326666181217142715
P932PMC publication ID7509768
P698PubMed publication ID30556496

P2093author name stringKei Wada
Keiichi Fukuyama
Masakazu Sugishima
P2860cites workHeme catabolism by the reconstituted heme oxygenase systemQ67531412
Purification and characterization of human biliverdin reductaseQ70539873
Purification and characterization of biliverdin reductase from rat liverQ70729972
Oxygenated form of heme . heme oxygenase complex and requirement for second electron to initiate heme degradation from the oxygenated complexQ71848214
Zinc . protoporphyrin is a selective inhibitor of heme oxygenase activity in the neonatal ratQ71853431
Resonance Raman and EPR spectroscopic studies on heme-heme oxygenase complexesQ72655657
Heme-heme oxygenase complex. Structure of the catalytic site and its implication for oxygen activationQ72724906
Crystallization and preliminary X-ray diffraction analysis of a rat biliverdin reductaseQ74219973
Crystallization and preliminary X-ray diffraction studies on the water soluble form of rat heme oxygenase-1 in complex with hemeQ77360202
Ferric alpha-hydroxyheme bound to heme oxygenase can be converted to verdoheme by dioxygen in the absence of added reducing equivalentsQ77895409
Imidazole-dioxolane compounds as isozyme-selective heme oxygenase inhibitorsQ79842136
Reduction of oxaporphyrin ring of CO-bound α-verdoheme complexed with heme oxygenase-1 by NADPH-cytochrome P450 reductaseQ83075264
Disruption of an active site hydrogen bond converts human heme oxygenase-1 into a peroxidaseQ95717606
Heme oxygenase and heme degradationQ21710702
Expression and characterization of full-length human heme oxygenase-1: the presence of intact membrane-binding region leads to increased binding affinity for NADPH cytochrome P450 reductaseQ24296465
Involvement of NADPH in the interaction between heme oxygenase-1 and cytochrome P450 reductaseQ24310223
Oligomerization is crucial for the stability and function of heme oxygenase-1 in the endoplasmic reticulumQ24339396
Biliverdin reductase: a major physiologic cytoprotectantQ24541497
Comparison of apo- and heme-bound crystal structures of a truncated human heme oxygenase-2Q24621015
Three-dimensional structure of NADPH-cytochrome P450 reductase: prototype for FMN- and FAD-containing enzymesQ24654975
Crystal structure of rat heme oxygenase-1 in complex with hemeQ27622187
Crystal structure of rat biliverdin reductaseQ27630105
Crystal structure of heme oxygenase from the gram-negative pathogen Neisseria meningitidis and a comparison with mammalian heme oxygenase-1Q27634857
Crystal structure of rat apo-heme oxygenase-1 (HO-1): mechanism of heme binding in HO-1 inferred from structural comparison of the apo and heme complex formsQ27639069
Crystal structure of a biliverdin IXalpha reductase enzyme-cofactor complexQ27639221
Crystal structure of rat heme oxygenase-1 in complex with heme bound to azide. Implication for regiospecific hydroxylation of heme at the alpha-meso carbonQ27639657
Comparison of the heme-free and -bound crystal structures of human heme oxygenase-1Q27640232
Crystal structure of rat heme oxygenase-1 in complex with biliverdin-iron chelate. Conformational change of the distal helix during the heme cleavage reactionQ27641404
Crystal structures of ferrous and CO-, CN(-)-, and NO-bound forms of rat heme oxygenase-1 (HO-1) in complex with heme: structural implications for discrimination between CO and O2 in HO-1Q27641850
The crystal structures of the ferric and ferrous forms of the heme complex of HmuO, a heme oxygenase of Corynebacterium diphtheriaeQ27642658
Crystal structure of the dioxygen-bound heme oxygenase from Corynebacterium diphtheriae: implications for heme oxygenase functionQ27643141
X-ray crystallographic and biochemical characterization of the inhibitory action of an imidazole-dioxolane compound on heme oxygenaseQ27643656
X-ray crystal structure of human heme oxygenase-1 in complex with 1-(adamantan-1-yl)-2-(1H-imidazol-1-yl)ethanone: a common binding mode for imidazole-based heme oxygenase-1 inhibitorsQ27652197
Structure and Function of an NADPH-Cytochrome P450 Oxidoreductase in an Open Conformation Capable of Reducing Cytochrome P450Q27653521
X-ray crystal structure of human heme oxygenase-1 with (2R,4S)-2-[2-(4-chlorophenyl)ethyl]-2-[(1H-imidazol-1-yl)methyl]-4[((5-trifluoromethylpyridin-2-yl)thio)methyl]-1,3-dioxolane: a novel, inducible binding modeQ27656400
Dioxygen activation for the self-degradation of heme: reaction mechanism and regulation of heme oxygenaseQ27660464
Conformational Changes of NADPH-Cytochrome P450 Oxidoreductase Are Essential for Catalysis and Cofactor BindingQ27667024
Discrimination between CO and O 2 in Heme Oxygenase: Comparison of Static Structures and Dynamic Conformation Changes following CO PhotolysisQ27674332
A Novel, “Double-Clamp” Binding Mode for Human Heme Oxygenase-1 InhibitionQ27676882
Structural basis for the electron transfer from an open form of NADPH-cytochrome P450 oxidoreductase to heme oxygenaseQ27681796
Distal regulation of heme binding of heme oxygenase-1 mediated by conformational fluctuationsQ27696835
Rv2074 is a novel F420 H2 -dependent biliverdin reductase in Mycobacterium tuberculosisQ27715540
Human biliverdin reductase is a leucine zipper-like DNA-binding protein and functions in transcriptional activation of heme oxygenase-1 by oxidative stressQ28214376
Biliverdin reductase, a novel regulator for induction of activating transcription factor-2 and heme oxygenase-1Q28247218
Biliverdin reductase: new features of an old enzyme and its potential therapeutic significanceQ28268811
Bilirubin is an antioxidant of possible physiological importanceQ28288206
The Arabidopsis HY2 gene encodes phytochromobilin synthase, a ferredoxin-dependent biliverdin reductaseQ28354306
Coupled motions direct electrons along human microsomal P450 ChainsQ28478496
The reactions of heme- and verdoheme-heme oxygenase-1 complexes with FMN-depleted NADPH-cytochrome P450 reductase. Electrons required for verdoheme oxidation can be transferred through a pathway not involving FMNQ28566694
Mass spectrometric identification of lysine residues of heme oxygenase-1 that are involved in its interaction with NADPH-cytochrome P450 reductaseQ28569380
Mechanism of heme degradation by heme oxygenaseQ29397702
Phytochrome structure and signaling mechanisms.Q30486809
Solution 1H NMR of the active site of substrate-bound, cyanide-inhibited human heme oxygenase. comparison to the crystal structure of the water-ligated formQ30647375
Solution 1H NMR investigation of the active site molecular and electronic structures of substrate-bound, cyanide-inhibited HmuO, a bacterial heme oxygenase from Corynebacterium diphtheriaeQ30754996
Crystal structures of ferrous and ferrous-NO forms of verdoheme in a complex with human heme oxygenase-1: catalytic implications for heme cleavageQ30975319
CO-trapping site in heme oxygenase revealed by photolysis of its co-bound heme complex: mechanism of escaping from product inhibition.Q31105739
Nuclear localization of biliverdin reductase in the rat kidney: response to nephrotoxins that induce heme oxygenase-1.Q31963580
Diatomic ligand discrimination by the heme oxygenases from Neisseria meningitidis and Pseudomonas aeruginosaQ33263176
Function and distribution of bilin biosynthesis enzymes in photosynthetic organismsQ33375085
Human biliverdin reductase: a member of the insulin receptor substrate family with serine/threonine/tyrosine kinase activityQ33771641
The mechanism of heme oxygenaseQ33878368
Hypoxic regulation of the cerebral microcirculation is mediated by a carbon monoxide-sensitive hydrogen sulfide pathway.Q34122686
NPAS2: a gas-responsive transcription factorQ34160458
Blue light and bilirubin excretionQ34285422
Structure and function of plant-type ferredoxinsQ34435668
Heme oxygenase/carbon monoxide signaling pathways: regulation and functional significanceQ34773844
Making light of it: the role of plant haem oxygenases in phytochrome chromophore synthesisQ34797569
Selectivity of imidazole-dioxolane compounds for in vitro inhibition of microsomal haem oxygenase isoformsQ35545244
Bacterial heme oxygenasesQ35877581
Antioxidant activities of bile pigmentsQ35877590
Distinct phytochrome actions in nonvascular plants revealed by targeted inactivation of phytobilin biosynthesisQ35991546
Crystallization of recombinant human heme oxygenase-1.Q36281120
Role of cysteine residues in heme binding to human heme oxygenase-2 elucidated by two-dimensional NMR spectroscopyQ36318748
The enzymatic conversion of heme to bilirubin by microsomal heme oxygenaseQ36475899
Structural insights into human heme oxygenase-1 inhibition by potent and selective azole-based compoundsQ36591335
Structure and catalytic mechanism of heme oxygenase.Q36834135
Cyanobacteriochromes: a new superfamily of tetrapyrrole-binding photoreceptors in cyanobacteriaQ37291008
Structures of the substrate-free and product-bound forms of HmuO, a heme oxygenase from corynebacterium diphtheriae: x-ray crystallography and molecular dynamics investigationQ37348889
Structural characterization of human heme oxygenase-1 in complex with azole-based inhibitorsQ37633749
A substrate-bound structure of cyanobacterial biliverdin reductase identifies stacked substrates as critical for activityQ37642479
Crystallographic studies of heme oxygenase complexed with an unstable reaction intermediate, verdoheme.Q38016674
Overview of heme degradation pathwayQ38050386
Measurement of membrane-bound human heme oxygenase-1 activity using a chemically defined assay systemQ38357560
Purification and Properties of Biliverdin Reductases from Pig Spleen and Rat Liver1Q39282376
Function and induction of the microsomal heme oxygenaseQ40158554
Crystal structure of human heme oxygenase-1.Q41687640
Redox-linked domain movements in the catalytic cycle of cytochrome p450 reductaseQ41808959
Expression, purification and preliminary X-ray crystallographic analysis of cyanobacterial biliverdin reductaseQ41839827
Activation of biliverdin-IXalpha reductase by inorganic phosphate and related anionsQ41845888
Crystal structure of heme oxygenase-1 from cyanobacterium Synechocystis sp. PCC 6803 in complex with hemeQ42641232
Heme oxygenase reveals its strategy for catalyzing three successive oxygenation reactionsQ43261631
Human biliverdin reductase is autophosphorylated, and phosphorylation is required for bilirubin formationQ43559842
A role for highly conserved carboxylate, aspartate-140, in oxygen activation and heme degradation by heme oxygenase-1.Q43663150
The reactivity of alpha-hydroxyhaem and verdohaem bound to haem oxygenase-1 to dioxygen and sodium dithioniteQ44188688
Heme oxygenase in Candida albicans is regulated by hemoglobin and is necessary for metabolism of exogenous heme and hemoglobin to alpha-biliverdinQ44654383
Synthesis and evaluation of azalanstat analogues as heme oxygenase inhibitorsQ45266887
Catalytic mechanism of heme oxygenase through EPR and ENDOR of cryoreduced oxy-heme oxygenase and its Asp 140 mutantsQ45712309
Rat liver heme oxygenase. High level expression of a truncated soluble form and nature of the meso-hydroxylating speciesQ46114677
Expression and characterization of truncated human heme oxygenase (hHO-1) and a fusion protein of hHO-1 with human cytochrome P450 reductaseQ46138916
Structural basis for novel delta-regioselective heme oxygenation in the opportunistic pathogen Pseudomonas aeruginosaQ46184086
Characterization of cyanobacterial biliverdin reductase. Conversion of biliverdin to bilirubin is important for normal phycobiliprotein biosynthesisQ46185557
Cystathionine beta-synthase as a carbon monoxide-sensitive regulator of bile excretionQ46196479
O(2)- and H(2)O(2)-dependent verdoheme degradation by heme oxygenase: reaction mechanisms and potential physiological roles of the dual pathway degradation.Q46663766
A kinetic study of the mechanism of conversion of alpha-hydroxyheme to verdoheme while bound to heme oxygenase.Q46696382
Microsomal heme oxygenase. Characterization of the enzymeQ48959671
Crystal structure of dimeric heme oxygenase-2 from Synechocystis sp. PCC 6803 in complex with heme.Q50772239
A heme oxygenase isoform is essential for aerobic growth in the cyanobacterium Synechocystis sp. PCC 6803: modes of differential operation of two isoforms/enzymes to adapt to low oxygen environments in cyanobacteria.Q53226947
Phytobilin biosynthesis: cloning and expression of a gene encoding soluble ferredoxin-dependent heme oxygenase from Synechocystis sp. PCC 6803.Q53945955
Biliverdin reductase of guinea pig liver.Q55061450
Detection of a Protein Conformational Equilibrium by Electrospray Ionisation-Ion Mobility-Mass SpectrometryQ58571762
The Oxygen and Carbon Monoxide Reactions of Heme OxygenaseQ59599934
P577publication date2018-12-17
P1433published inCurrent Medicinal ChemistryQ3007710
P1476titleRecent Advances in the Understanding of the Reaction Chemistries of the Heme Catabolizing Enzymes HO and BVR Based on High Resolution Protein Structures

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Q90444009Cardiac function dependence on carbon monoxidecites workP2860

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