Identification of genes involved in fruit development/ripening in Capsicum and development of functional markers

scientific article published on 04 January 2019

Identification of genes involved in fruit development/ripening in Capsicum and development of functional markers is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1016/J.YGENO.2019.01.002
P698PubMed publication ID30615924

P50authorSushil ChhapekarQ61794451
Ilyas AhmadQ90396995
Vandana JaiswalQ124632704
P2093author name stringAjay Kumar
Vijaya Brahma
Nitin Kumar
Abdul Rawoof
Meenakshi Dubey
Nirala Ramchiary
Khushbu Islam
Mukesh Nitin
P2860cites workTopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusionsQ21999527
Genome sequence of the hot pepper provides insights into the evolution of pungency in Capsicum speciesQ22122071
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Basic local alignment search toolQ25938991
DNA Methylation and Chromatin Regulation during Fleshy Fruit Development and RipeningQ26744539
Genetic diversity in Capsicum germplasm based on microsatellite and random amplified microsatellite polymorphism markersQ30546316
Phytoene synthase genes in tomato (Solanumlycopersicum L.) - new data on the structures, the deduced amino acid sequences and the expression patterns.Q31141621
Utility of EST-derived SSRs as population genetics markers in a beetle.Q33316635
Enhancement of fruit shelf life by suppressing N-glycan processing enzymesQ33664565
Members of the tomato FRUITFULL MADS-box family regulate style abscission and fruit ripeningQ33809856
Insights into transcriptional regulation of β-D-N-acetylhexosaminidase, an N-glycan-processing enzyme involved in ripening-associated fruit softeningQ34370918
Tuning LeSPL-CNR expression by SlymiR157 affects tomato fruit ripening.Q34981011
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Characterisation of ethylene pathway components in non-climacteric capsicumQ35056004
Wounding tomato fruit elicits ripening-stage specific changes in gene expression and production of volatile compounds.Q35118681
A non-climacteric fruit gene CaMADS-RIN regulates fruit ripening and ethylene biosynthesis in climacteric fruitQ35154003
Genetic regulation of fruit development and ripeningQ35686463
Comparative Analysis of Fruit Metabolites and Pungency Candidate Genes Expression between Bhut Jolokia and Other Capsicum Species.Q36218095
The role of alternative oxidase in tomato fruit ripening and its regulatory interaction with ethyleneQ36239678
Fruit Ripening Regulation of α-Mannosidase Expression by the MADS Box Transcription Factor RIPENING INHIBITOR and EthyleneQ36484797
Type 2C protein phosphatase ABI1 is a negative regulator of strawberry fruit ripeningQ36743750
Genes that influence yield in tomato.Q36752866
SUCROSE NONFERMENTING1-RELATED PROTEIN KINASE2.6, an ortholog of OPEN STOMATA1, is a negative regulator of strawberry fruit development and ripeningQ38301569
Identification of three tomato flower and fruit MADS-box proteins with a putative histone deacetylase binding domain.Q38340148
TOMATO AGAMOUS-LIKE 1 is a component of the fruit ripening regulatory networkQ38349111
Ethylene-Regulated Glutamate Dehydrogenase Fine-Tunes Metabolism during Anoxia-ReoxygenationQ39345432
Light and abscisic acid independently regulated FaMYB10 in Fragaria × ananassa fruit.Q41656394
The fading distinctions between classical patterns of ripening in climacteric and non-climacteric fruit and the ubiquity of ethylene-An overviewQ42159198
Non-smoky glycosyltransferase1 prevents the release of smoky aroma from tomato fruit.Q42709814
GLYCOALKALOID METABOLISM1 is required for steroidal alkaloid glycosylation and prevention of phytotoxicity in tomatoQ42722779
Overexpression of yeast spermidine synthase impacts ripening, senescence and decay symptoms in tomato.Q43003205
Overexpression of a cell wall enzyme reduces xyloglucan depolymerization and softening of transgenic tomato fruitsQ43115932
WebSat--a web software for microsatellite marker developmentQ43175910
The tomato FRUITFULL homologs TDR4/FUL1 and MBP7/FUL2 regulate ethylene-independent aspects of fruit ripeningQ43705670
SlARF4, an auxin response factor involved in the control of sugar metabolism during tomato fruit developmentQ43882335
Predicting the substrate specificity of a glycosyltransferase implicated in the production of phenolic volatiles in tomato fruit.Q44110342
LeCTR1, a tomato CTR1-like gene, demonstrates ethylene signaling ability in Arabidopsis and novel expression patterns in tomatoQ44213623
Altered chloroplast development and delayed fruit ripening caused by mutations in a zinc metalloprotease at the lutescent2 locus of tomatoQ44543720
Critical roles of DNA demethylation in the activation of ripening-induced genes and inhibition of ripening-repressed genes in tomato fruitQ44871790
Identification of a specific isoform of tomato lipoxygenase (TomloxC) involved in the generation of fatty acid-derived flavor compoundsQ45044415
A tomato MADS-box transcription factor, SlMADS1, acts as a negative regulator of fruit ripening.Q45382119
Combined transcriptome, genetic diversity and metabolite profiling in tomato fruit reveals that the ethylene response factor SlERF6 plays an important role in ripening and carotenoid accumulation.Q45909952
Regulation of tomato fruit polygalacturonase mRNA accumulation by ethylene: A Re-examinationQ45965675
Conserved changes in the dynamics of metabolic processes during fruit development and ripening across speciesQ46087504
Pepper fruit as a model to study the metabolism of antioxidants, ROS and RNS.Q46655436
A new tomato NAC (NAM/ATAF1/2/CUC2) transcription factor, SlNAC4, functions as a positive regulator of fruit ripening and carotenoid accumulationQ48035786
A naturally occurring epigenetic mutation in a gene encoding an SBP-box transcription factor inhibits tomato fruit ripening.Q48086140
Mining and survey of simple sequence repeats in expressed sequence tags of dicotyledonous speciesQ48105556
A tomato MADS-box protein, SlCMB1, regulates ethylene biosynthesis and carotenoid accumulation during fruit ripening.Q50146177
Tomato GOLDEN2-LIKE transcription factors reveal molecular gradients that function during fruit development and ripening.Q50461704
Extensive transcriptomic studies on the roles played by abscisic acid and auxins in the development and ripening of strawberry fruits.Q50483327
Regulatory role of cystathionine-gamma-synthase and de novo synthesis of methionine in ethylene production during tomato fruit ripening.Q50726366
Transcriptional regulation of fruit ripening by tomato FRUITFULL homologs and associated MADS box proteins.Q51524029
Transcriptome and metabolite profiling show that APETALA2a is a major regulator of tomato fruit ripening.Q51886727
Ethylene receptor degradation controls the timing of ripening in tomato fruit.Q51979985
Ethylene Biosynthesis and its Regulation in Higher PlantsQ55899022
Characterization of the hot pepper (Capsicum frutescens) fruit ripening regulated by ethylene and ABAQ58791458
Extraction of DNA from milligram amounts of fresh, herbarium and mummified plant tissuesQ86892596
P433issue6
P921main subjectCapsicumQ201959
P304page(s)1913-1922
P577publication date2019-01-04
P1433published inGenomicsQ5533503
P1476titleIdentification of genes involved in fruit development/ripening in Capsicum and development of functional markers
P478volume111

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cites work (P2860)
Q90034891Development and characterization of non-coding RNA based simple sequence repeat markers in Capsicum species
Q96608181Single-base cytosine methylation analysis in fruits of three Capsicum species
Q90034909Transcriptome landscaping for gene mining and SSR marker development in Coriander (Coriandrum sativum L.).

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