| P2093 | author name string | Lars G Kamphuis | |
| | Carolyn Graham-Taylor | |
| | Mark C Derbyshire | |
| P2860 | cites work | OrthoFinder: solving fundamental biases in whole genome comparisons dramatically improves orthogroup inference accuracy | Q21146630 |
| | Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea | Q21563381 |
| | Tools to kill: genome of one of the most destructive plant pathogenic fungi Macrophomina phaseolina | Q22065323 |
| | Retinal biosynthesis in fungi: characterization of the carotenoid oxygenase CarX from Fusarium fujikuroi | Q24672776 |
| | Combined evidence annotation of transposable elements in genome sequences | Q24813273 |
| | Rapid expansion and functional divergence of subtelomeric gene families in yeasts. | Q27937316 |
| | The Fusarium graminearum genome reveals more secondary metabolite gene clusters and hints of horizontal gene transfer | Q28543819 |
| | Gapless genome assembly of Colletotrichum higginsianum reveals chromosome structure and association of transposable elements with secondary metabolite gene clusters | Q38603463 |
| | In silico prediction and characterization of secondary metabolite biosynthetic gene clusters in the wheat pathogen Zymoseptoria tritici | Q38619658 |
| | Genome-Wide Analysis of Secondary Metabolite Gene Clusters in Ophiostoma ulmi and Ophiostoma novo-ulmi Reveals a Fujikurin-Like Gene Cluster with a Putative Role in Infection | Q38665411 |
| | Iron Uptake Oxidoreductase (IruO) Uses a Flavin Adenine Dinucleotide Semiquinone Intermediate for Iron-Siderophore Reduction. | Q38809196 |
| | Secondary metabolite arsenal of an opportunistic pathogenic fungus. | Q39302167 |
| | How light affects the life of Botrytis | Q39397450 |
| | Interaction of human phagocytes with pigmentless Aspergillus conidia | Q39516589 |
| | DHN melanin biosynthesis in the plant pathogenic fungus Botrytis cinerea is based on two developmentally regulated key enzyme (PKS)-encoding genes | Q40932099 |
| | PopGenome: an efficient Swiss army knife for population genomic analyses in R | Q41122779 |
| | SMURF: Genomic mapping of fungal secondary metabolite clusters | Q42573739 |
| | Melanin is not required for turgor generation but enhances cell-wall rigidity in appressoria of the corn pathogen Colletotrichum graminicola | Q42774359 |
| | Ferricrocin synthesis in Magnaporthe grisea and its role in pathogenicity in rice | Q43052613 |
| | The sirodesmin biosynthetic gene cluster of the plant pathogenic fungus Leptosphaeria maculans | Q45074868 |
| | Phytotoxin production and phytoalexin elicitation by the phytopathogenic fungus Sclerotinia sclerotiorum | Q45239665 |
| | Melanin synthesis by Sclerotinia sclerotiorum. | Q45964039 |
| | Drivers of genetic diversity in secondary metabolic gene clusters within a fungal species | Q46259567 |
| | STRIDE: Species Tree Root Inference from Gene Duplication Events | Q46286532 |
| | FunGeneClusterS: Predicting fungal gene clusters from genome and transcriptome data. | Q46757738 |
| | Genome mining and functional genomics for siderophore production in Aspergillus niger | Q46861119 |
| | NPS6, encoding a nonribosomal peptide synthetase involved in siderophore-mediated iron metabolism, is a conserved virulence determinant of plant pathogenic ascomycetes. | Q48083937 |
| | Secondary metabolism in Fusarium fujikuroi: strategies to unravel the function of biosynthetic pathways. | Q50075873 |
| | Introduction of Large Sequence Inserts by CRISPR-Cas9 To Create Pathogenicity Mutants in the Multinucleate Filamentous Pathogen Sclerotinia sclerotiorum. | Q55367646 |
| | Comparative Transcriptome Analysis Shows Conserved Metabolic Regulation during Production of Secondary Metabolites in Filamentous Fungi | Q64018794 |
| | A whole genome scan of SNP data suggests a lack of abundant hard selective sweeps in the genome of the broad host range plant pathogenic fungus Sclerotinia sclerotiorum | Q64108779 |
| | Cloning of a sugar utilization gene cluster in Aspergillus parasiticus | Q74291597 |
| | The Botrytis cinerea phytotoxin botcinic acid requires two polyketide synthases for production and has a redundant role in virulence with botrydial | Q84488127 |
| | Characterization of the biosynthetic gene cluster for the ribosomally synthesized cyclic peptide ustiloxin B in Aspergillus flavus | Q87907286 |
| | Comparative genomics to explore phylogenetic relationship, cryptic sexual potential and host specificity of Rhynchosporium species on grasses | Q28820868 |
| | Trimmomatic: a flexible trimmer for Illumina sequence data | Q29547278 |
| | BEDTools: a flexible suite of utilities for comparing genomic features | Q29547332 |
| | Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2 | Q29547403 |
| | Biotrophy-specific downregulation of siderophore biosynthesis in Colletotrichum graminicola is required for modulation of immune responses of maize | Q30317484 |
| | Sub-telomere directed gene expression during initiation of invasive aspergillosis | Q30847680 |
| | Phylogenomics reveals subfamilies of fungal nonribosomal peptide synthetases and their evolutionary relationships. | Q33526501 |
| | HISAT: a fast spliced aligner with low memory requirements | Q34043398 |
| | Secondary metabolism in fungi: does chromosomal location matter? | Q34067457 |
| | Fungal siderophore metabolism with a focus on Aspergillus fumigatus | Q34172089 |
| | The gene carD encodes the aldehyde dehydrogenase responsible for neurosporaxanthin biosynthesis in Fusarium fujikuroi | Q34199807 |
| | Genome evolution in filamentous plant pathogens: why bigger can be better | Q34273327 |
| | featureCounts: an efficient general purpose program for assigning sequence reads to genomic features | Q34384848 |
| | A genome-wide survey of the secondary metabolite biosynthesis genes in the wheat pathogen Parastagonospora nodorum | Q34385351 |
| | Fungal secondary metabolism - from biochemistry to genomics | Q34472162 |
| | A chemical ecogenomics approach to understand the roles of secondary metabolites in fungal cereal pathogens | Q34541019 |
| | Comprehensive annotation of secondary metabolite biosynthetic genes and gene clusters of Aspergillus nidulans, A. fumigatus, A. niger and A. oryzae | Q34687046 |
| | Endogenous cross-talk of fungal metabolites | Q34817802 |
| | New insights into the formation of fungal aromatic polyketides | Q35235074 |
| | antiSMASH 3.0-a comprehensive resource for the genome mining of biosynthetic gene clusters | Q35810231 |
| | Changes in the Sclerotinia sclerotiorum transcriptome during infection of Brassica napus | Q36327223 |
| | Iron uptake in fungi: a system for every source | Q36522195 |
| | The human phylome | Q36672352 |
| | Biosynthetic investigation of phomopsins reveals a widespread pathway for ribosomal natural products in Ascomycetes | Q36770494 |
| | Detecting sequence homology at the gene cluster level with MultiGeneBlast | Q36896963 |
| | Biosynthesis of secondary metabolites in the rice blast fungus Magnaporthe grisea: the role of hybrid PKS-NRPS in pathogenicity | Q37083835 |
| | Siderophores in fungal physiology and virulence | Q37235289 |
| | Prototype of an intertwined secondary-metabolite supercluster | Q37240527 |
| | Most parsimonious reconciliation in the presence of gene duplication, loss, and deep coalescence using labeled coalescent trees | Q37614948 |
| | The complete genome sequence of the phytopathogenic fungus Sclerotinia sclerotiorum reveals insights into the genome architecture of broad host range pathogens | Q37738534 |
| | Sclerotinia sclerotiorum (Lib.) de Bary: biology and molecular traits of a cosmopolitan pathogen | Q37761198 |
| | Human and plant fungal pathogens: the role of secondary metabolites | Q38185379 |
| | Biological roles of fungal carotenoids | Q38256902 |
| | Pathogenic attributes of Sclerotinia sclerotiorum: switching from a biotrophic to necrotrophic lifestyle | Q38364851 |
| | Leveraging ecological theory to guide natural product discovery | Q38598758 |
| P4510 | describes a project that uses | DESeq2 | Q113018293 |
| P433 | issue | 1 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | in silico | Q192572 |
| | secondary metabolite | Q522244 |
| | Sclerotinia sclerotiorum | Q2165315 |
| P304 | page(s) | 7 | |
| P577 | publication date | 2020-01-02 | |
| P1433 | published in | BMC Genomics | Q15765854 |
| P1476 | title | A detailed in silico analysis of secondary metabolite biosynthesis clusters in the genome of the broad host range plant pathogenic fungus Sclerotinia sclerotiorum | |
| P478 | volume | 21 | |