Analyses of pig genomes provide insight into porcine demography and evolution (scientific article)

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Q37589321	Genetic analysis of teat number in pigs reveals some developmental pathways independent of vertebra number and several loci which only affect a specific side
Q38234966	Genetic anchoring of whole-genome shotgun assemblies
Q38844789	Genetic architecture of gene expression underlying variation in host response to porcine reproductive and respiratory syndrome virus infection.
Q97531450	Genetic architecture of individual variation in recombination rate on the X chromosome in cattle
Q30993728	Genetic diversity and population structure of six Chinese indigenous pig breeds in the Taihu Lake region revealed by sequencing data
Q36256397	Genetic diversity, extent of linkage disequilibrium and persistence of gametic phase in Canadian pigs
Q49899795	Genetic mapping using 1.4M SNP array refined loci for fatty acid composition traits in Chinese Erhualian and Bamaxiang pigs.
Q103002353	Genetic origins and diversity of bushpigs from Madagascar (Potamochoerus larvatus, family Suidae)
Q36980250	Genetic variations associated with six-white-point coat pigmentation in Diannan small-ear pigs
Q55292386	Genetically Induced Tumors in the Oncopig Model Invoke an Antitumor Immune Response Dominated by Cytotoxic CD8β+ T Cells and Differentiated γδ T Cells Alongside a Regulatory Response Mediated by FOXP3+ T Cells and Immunoregulatory Molecules.
Q50107614	Genetically engineered pigs as models for human disease.
Q38162792	Genetically modified pigs to model human diseases
Q38862150	Genetics of Adiposity in Large Animal Models for Human Obesity-Studies on Pigs and Dogs
Q35685874	Genome Wide Distributions and Functional Characterization of Copy Number Variations between Chinese and Western Pigs
Q64901853	Genome analysis of Yucatan miniature pigs to assess their potential as biomedical model animals.
Q30849389	Genome data from a sixteenth century pig illuminate modern breed relationships
Q96127546	Genome sequence and comparative analysis of reindeer (Rangifer tarandus) in northern Eurasia
Q34174310	Genome sequencing and analysis of Mangalica, a fatty local pig of Hungary
Q38153983	Genome sequencing and population genomics in non-model organisms
Q28608460	Genome sequencing of the extinct Eurasian wild aurochs, Bos primigenius, illuminates the phylogeography and evolution of cattle
Q28658391	Genome sequencing reveals fine scale diversification and reticulation history during speciation in Sus
Q64917567	Genome-Wide Investigation and Functional Analysis of Sus scrofa RNA Editing Sites across Eleven Tissues.
Q91536284	Genome-Wide Single-Nucleotide Polymorphism Data Unveil Admixture of Chinese Indigenous Chicken Breeds with Commercial Breeds
Q39231464	Genome-editing technologies to improve research, reproduction, and production in pigs.
Q33842854	Genome-wide DNA methylation analysis of the porcine hypothalamus-pituitary-ovary axis
Q34100232	Genome-wide DNA methylation changes in skeletal muscle between young and middle-aged pigs
Q88726757	Genome-wide DNA methylation profiles of porcine ovaries in estrus and proestrus
Q41692195	Genome-wide SNP data unveils the globalization of domesticated pigs.
Q37117398	Genome-wide analysis of DNA methylation in obese, lean, and miniature pig breeds
Q36131223	Genome-wide analysis of DNA methylation in pigs using reduced representation bisulfite sequencing
Q35898187	Genome-wide analysis of long non-coding RNAs at early stage of skin pigmentation in goats (Capra hircus).
Q46738292	Genome-wide analysis of structural variants reveals genetic differences in Chinese pigs
Q87603332	Genome-wide analysis reveals artificial selection on coat colour and reproductive traits in Chinese domestic pigs
Q35058907	Genome-wide and local pattern of linkage disequilibrium and persistence of phase for 3 Danish pig breeds
Q27316646	Genome-wide association analyses for fatty acid composition in porcine muscle and abdominal fat tissues
Q42870684	Genome-wide association and pathway analysis of feed efficiency in pigs reveal candidate genes and pathways for residual feed intake
Q53426682	Genome-wide association of changes in swine feeding behaviour due to heat stress.
Q113153200	Genome-wide association studies and meta-analysis reveal novel quantitative trait loci and pleiotropic loci for swine head-related traits1,2
Q33660557	Genome-wide association study confirm major QTL for backfat fatty acid composition on SSC14 in Duroc pigs
Q47275935	Genome-wide association study for ham weight loss at first salting in Italian Large White pigs: towards the genetic dissection of a key trait for dry-cured ham production
Q47892081	Genome-wide association study reveals regions associated with gestation length in two pig populations
Q35201200	Genome-wide association study using deregressed breeding values for cryptorchidism and scrotal/inguinal hernia in two pig lines.
Q54942059	Genome-wide detection of selection signatures in Chinese indigenous Laiwu pigs revealed candidate genes regulating fat deposition in muscle.
Q59793888	Genome-wide differences in DNA methylation changes in caprine ovaries between oestrous and dioestrous phases
Q58102692	Genome-wide epigenetic landscape of pig lincRNAs and their evolution during porcine domestication
Q35036324	Genome-wide estimates of coancestry and inbreeding in a closed herd of ancient Iberian pigs
Q42718047	Genome-wide identification of long intergenic noncoding RNA genes and their potential association with domestication in pigs.
Q38466772	Genome-wide identification, classification and functional analyses of the bHLH transcription factor family in the pig, Sus scrofa
Q34787581	Genome-wide patterns of genetic variation in two domestic chickens
Q38748519	Genome-wide profiling of Sus scrofa circular RNAs across nine organs and three developmental stages
Q35905677	Genome-wide whole blood microRNAome and transcriptome analyses reveal miRNA-mRNA regulated host response to foodborne pathogen Salmonella infection in swine.
Q46237994	Genomic Analysis of Demographic History and Ecological Niche Modeling in the Endangered Sumatran Rhinoceros Dicerorhinus sumatrensis
Q45397753	Genomic analyses identify distinct patterns of selection in domesticated pigs and Tibetan wild boars
Q64079879	Genomic analysis on pygmy hog reveals extensive interbreeding during wild boar expansion
Q34477690	Genomic analysis reveals selection for Asian genes in European pigs following human-mediated introgression
Q37390173	Genomic analysis reveals selection in Chinese native black pig.
Q36994014	Genomic and epigenomic insights into nutrition and brain disorders
Q37655692	Genomic and phenotypic characterization of a wild medaka population: towards the establishment of an isogenic population genetic resource in fish
Q89324393	Genomic and transcriptomic analyses reveal selection of genes for puberty in Bama Xiang pigs
Q97596418	Genomic diversity revealed by whole-genome sequencing in three Danish commercial pig breeds
Q90183419	Genomic diversity, linkage disequilibrium and selection signatures in European local pig breeds assessed with a high density SNP chip
Q40202697	Genomic prediction of growth in pigs based on a model including additive and dominance effects.
Q37254893	Genomic prediction using models with dominance and imprinting effects for backfat thickness and average daily gain in Danish Duroc pigs
Q38216128	Genomic profiling to improve embryogenesis in the pig.
Q30727390	Genomic relationships computed from either next-generation sequence or array SNP data.
Q57292406	Genomic responses to selection for tame/aggressive behaviors in the silver fox ()
Q38666501	Genomic selection for crossbred performance accounting for breed-specific effects
Q41686805	Genomic selection in a pig population including information from slaughtered full sibs of boars within a sib-testing program
Q35103792	Genomic selection needs to be carefully assessed to meet specific requirements in livestock breeding programs
Q37622050	Genomic variation in macrophage-cultured European porcine reproductive and respiratory syndrome virus Olot/91 revealed using ultra-deep next generation sequencing
Q36712117	Genomic variation in the porcine immunoglobulin lambda variable region.
Q57881400	Genomics to systems biology in animal and veterinary sciences: Progress, lessons and opportunities
Q46306588	Genotyping-by-sequencing through transcriptomics: implementation in a range of crop species with varying reproductive habits and ploidy levels.
Q64056842	Gestational diabetes promotes germ cell cCyst breakdown and primordial follicle formation in newborn mice via the AKT signaling pathway
Q33953596	Global copy number analyses by next generation sequencing provide insight into pig genome variation
Q41016527	Haplotypic diversity of porcine LEP and LEPR genes involved in growth and fatness regulation
Q90259593	Harnessing genomic information for livestock improvement
Q37071143	Hemodynamics and right-ventricle functional characteristics of a swine carotid artery-jugular vein shunt model of pulmonary arterial hypertension: An 18-month experimental study
Q90217952	High doses of ANP and BNP exacerbate lipolysis in humans and the lipolytic effect of BNP is associated with cardiac triglyceride content in pigs
Q34662957	High throughput transcriptome analysis of lipid metabolism in Syrian hamster liver in absence of an annotated genome.
Q90408702	High-quality whole-genome sequence of an abundant Holarctic odontocete, the harbour porpoise (Phocoena phocoena)
Q92603060	High-throughput metagenome analysis of the Sarcoptes scabiei internal microbiota and in-situ identification of intestinal Streptomyces sp
Q47173916	Historical demography of common carp estimated from individuals collected from various parts of the world using the pairwise sequentially markovian coalescent approach
Q114219954	Historical range expansion and biological changes of Sus scrofa corresponding to domestication and feralization
Q112728543	Homozygosity Mapping Reveals Population History and Trait Architecture in Self-Incompatible Pear (Pyrus spp.).
Q26741402	How Active Are Porcine Endogenous Retroviruses (PERVs)?
Q45256869	How immunogenetically different are domestic pigs from wild boars: a perspective from single-nucleotide polymorphisms of 19 immunity-related candidate genes
Q58693409	How to estimate kinship
Q112714178	Human-Mediated Admixture and Selection Shape the Diversity on the Modern Swine (Sus scrofa) Y Chromosomes
Q34818424	Hybrid origin of European commercial pigs examined by an in-depth haplotype analysis on chromosome 1.
Q42505319	Hydrogel derived from decellularized porcine adipose tissue as a promising biomaterial for soft tissue augmentation
Q91341449	Hydrogel from Acellular Porcine Adipose Tissue Accelerates Wound Healing by Inducing Intradermal Adipocyte Regeneration
Q36049336	Hyperinsulinemia shifted energy supply from glucose to ketone bodies in early nonalcoholic steatohepatitis from high-fat high-sucrose diet induced Bama minipigs
Q41206768	ICAM-1-dependent and ICAM-1-independent neutrophil lung infiltration by porcine reproductive and respiratory syndrome virus infection
Q52574395	IFN-λ and microRNAs are important modulators of the pulmonary innate immune response against influenza A (H1N2) infection in pigs.
Q35845732	Identification and annotation of conserved promoters and macrophage-expressed genes in the pig genome
Q35913213	Identification of Copy Number Variations in Xiang and Kele Pigs
Q52584206	Identification of Differentially Expressed Genes in Porcine Ovaries at Proestrus and Estrus Stages Using RNA-Seq Technique.
Q36325651	Identification of Low-Confidence Regions in the Pig Reference Genome (Sscrofa10.2).
Q100948156	Identification of Signatures of Selection by Whole-Genome Resequencing of a Chinese Native Pig
Q37629348	Identification of genes regulating growth and fatness traits in pig through hypothalamic transcriptome analysis.
Q38887218	Identification of genetic variation in the swine toll-like receptors and development of a porcine TLR genotyping array.
Q28828664	Identification of protein-damaging mutations in 10 swine taste receptors and 191 appetite-reward genes
Q38234881	Identification of selection signatures in livestock species
Q46943241	Identification of species-specific novel transcripts in pig reproductive tissues using RNA-seq
Q52866944	Identification of the Q969R gain-of-function polymorphism in the gene encoding porcine NLRP3 and its distribution in pigs of Asian and European origin.
Q34989104	Identification of the porcine XIST gene and its differential CpG methylation status in male and female pig cells
Q48868867	Identifying genetic loci controlling neonatal passive transfer of immunity using a hybrid genotyping strategy.
Q36181276	Impact of neonatal iron deficiency on hippocampal DNA methylation and gene transcription in a porcine biomedical model of cognitive development
Q51151266	Impact of sensory feed additives on feed intake, feed preferences, and growth of female piglets during the early postweaning period.
Q96339136	Impaired T cell responses in domestic pigs and wild boar upon infection with a highly virulent African swine fever virus strain
Q34427642	Imprinted loci in domestic livestock species as epigenomic targets for artificial selection of complex traits.
Q64063239	Improved annotation of the domestic pig genome through integration of Iso-Seq and RNA-seq data
Q93031668	Improving accuracy of direct and maternal genetic effects in genomic evaluations using pooled boar semen: a simulation study1
Q101133283	Improving read alignment through the generation of alternative reference via iterative strategy
Q114392399	Imputation of Ancient Whole Genome Sus scrofa DNA Introduces Biases Toward Main Population Components in the Reference Panel
Q40784947	Imputation of genotypes in Danish purebred and two-way crossbred pigs using low-density panels
Q61443957	Imputation to whole-genome sequence using multiple pig populations and its use in genome-wide association studies
Q58580388	Imputation-Based Whole-Genome Sequence Association Study Reveals Constant and Novel Loci for Hematological Traits in a Large-Scale Swine F Resource Population
Q89027271	In silico approaches to discover the functional impact of non-synonymous single nucleotide polymorphisms in selective sweep regions of the Landrace genome
Q38695167	Inactivation of porcine endogenous retrovirus in pigs using CRISPR-Cas9.
Q47223518	Including crossbred pigs in the genomic relationship matrix through utilization of both linkage disequilibrium and linkage analysis.
Q101051239	Inclusion of endophenotypes in a standard GWAS facilitate a detailed mechanistic understanding of genetic elements that control blood lipid levels
Q35884501	Increased prediction accuracy using a genomic feature model including prior information on quantitative trait locus regions in purebred Danish Duroc pigs
Q35397879	Increasing gene discovery and coverage using RNA-seq of globin RNA reduced porcine blood samples.
Q92445473	Infection in xenotransplantation: opportunities and challenges
Q52728223	Infectious disease risks in xenotransplantation.
Q36291371	Inferring Bottlenecks from Genome-Wide Samples of Short Sequence Blocks
Q27309104	Inferring Population Size History from Large Samples of Genome-Wide Molecular Data - An Approximate Bayesian Computation Approach
Q46236840	Inferring the evolution of the major histocompatibility complex of wild pigs and peccaries using hybridisation DNA capture-based sequencing.
Q118108026	Insights into mammalian TE diversity through the curation of 248 genome assemblies
Q113745451	Insights on the historical biogeography of Philippine domestic pigs and its relationship with continental domestic pigs and wild boars
Q49569577	Integrated analysis of mRNA and miRNA expression profiles in livers of Yimeng black pigs with extreme phenotypes for backfat thickness.
Q114062831	Integration of multi-omics data reveals cis-regulatory variants that are associated with phenotypic differentiation of eastern from western pigs
Q35233809	Integrative structural annotation of de novo RNA-Seq provides an accurate reference gene set of the enormous genome of the onion (Allium cepa L.).
Q26752837	Interleukins, interferons, and establishment of pregnancy in pigs
Q118126083	Introduced, Mixed, and Peripheral: Conservation of Mitochondrial-DNA Lineages in the Wild Boar (Sus scrofa L.) Population in the Urals
Q61448046	Introgression of Chinese haplotypes contributed to the improvement of Danish Duroc pigs
Q90104728	Introgression of Eastern Chinese and Southern Chinese haplotypes contributes to the improvement of fertility and immunity in European modern pigs
Q28069653	Investigating the Metabolic Syndrome: Contributions of Swine Models
Q85943749	Is there a single porcine protegrin gene?
Q41067432	Isolation of subtelomeric sequences of porcine chromosomes for translocation screening reveals errors in the pig genome assembly
Q36208167	Joint Profiling of miRNAs and mRNAs Reveals miRNA Mediated Gene Regulation in the Göttingen Minipig Obesity Model.
Q35061942	Kinotypes: stable species- and individual-specific profiles of cellular kinase activity
Q57837425	Lack of polymorphism at the MC1R wild-type allele and evidence of domestic allele introgression across European wild boar populations
Q91218462	Landscape of Loci and Candidate Genes for Muscle Fatty Acid Composition in Pigs Revealed by Multiple Population Association Analysis
Q66988525	Large-scale ruminant genome sequencing provides insights into their evolution and distinct traits
Q39407538	Linkage disequilibrium and haplotype block structure in six commercial pig lines.
Q89442876	Linkage disequilibrium pattern and genome-wide association mapping for meat traits in multiple porcine F2 crosses
Q35447668	Linkage disequilibrium patterns and persistence of phase in purebred and crossbred pig (Sus scrofa) populations
Q59665591	Livestock 2.0 - genome editing for fitter, healthier, and more productive farmed animals
Q38163031	Livestock and the promise of genomics
Q41849963	Living on a volcano's edge: genetic isolation of an extremophile terrestrial metazoan.
Q36078234	Local and global patterns of admixture and population structure in Iranian native cattle
Q99248150	Locus-specific analysis of DNA methylation patterns in cloned and in vitro fertilized porcine embryos
Q52656010	Long non-coding RNAs and mRNAs profiling during spleen development in pig.
Q33798647	Loss-of-function myostatin mutation increases insulin sensitivity and browning of white fat in Meishan pigs
Q48145518	Low-pass single-chromosome sequencing of human small supernumerary marker chromosomes (sSMCs) and Apodemus B chromosomes.
Q41089836	Mammalian Comparative Genomics Reveals Genetic and Epigenetic Features Associated with Genome Reshuffling in Rodentia
Q52721634	Mammalian genomic regulatory regions predicted by utilizing human genomics, transcriptomics, and epigenetics data.
Q64895805	Material Characterization of Hardening Soft Sponge Featuring MR Fluid and Application of 6-DOF MR Haptic Master for Robot-Assisted Surgery.
Q113347939	Maternal lineage of Nicobari pig (Sus scrofa nicobaricus) correlated with migration of Nicobarese, a native tribal population of Andaman and Nicobar Islands, India
Q92679674	Mechanism of nonthermal induction of apoptosis by high-intensity focused electromagnetic procedure: Biochemical investigation in a porcine model
Q91319235	MiR-144-3p Enhances Cardiac Fibrosis After Myocardial Infarction by Targeting PTEN
Q38721240	Miniature Swine for Preclinical Modeling of Complexities of Human Disease for Translational Scientific Discovery and Accelerated Development of Therapies and Medical Devices
Q38235214	Mining the pig genome to investigate the domestication process.
Q48039754	Minipig and beagle animal model genomes aid species selection in pharmaceutical discovery and development
Q48288401	Miss Piggy on the catwalk again.
Q39140349	Mitochondrial DNA sequence and phylogenetic evaluation of geographically disparate Sus scrofa breeds.
Q46856975	Mixed signals from hybrid genomes
Q96950041	Modelling the shape of the pig scapula
Q47097224	Modulation of the main porcine enteric neuropeptides by a single low-dose of lipopolysaccharide (LPS) Salmonella Enteritidis
Q38090027	Molecular advances in QTL discovery and application in pig breeding
Q39324692	Molecular approaches to the diagnosis and monitoring of production diseases in pigs.
Q53060332	Molecular characterization and analysis of the porcine NURR1 gene.
Q35043709	Molecular cloning and characterization of porcine Na⁺/K⁺-ATPase isoforms α1, α2, α3 and the ATP1A3 promoter
Q34458694	Molecular evolution of the porcine type I interferon family: subtype-specific expression and antiviral activity
Q44316631	Morphology and chronology of diphyodont dentition in miniature pigs, Sus Scrofa
Q30371250	Multiplex sequencing of bacterial artificial chromosomes for assembling complex plant genomes.
Q34478523	Mutation discovery for Mendelian traits in non-laboratory animals: a review of achievements up to 2012.
Q39373131	NGS-based reverse genetic screen for common embryonic lethal mutations compromising fertility in livestock.
Q35077832	NHE isoform switching and KChIP2 upregulation in aging porcine atria
Q100315730	Neonatal and infant immunity for tuberculosis vaccine development: importance of age-matched animal models
Q46783546	New cryptic karyotypic differences between cattle (Bos taurus) and goat (Capra hircus).
Q47864771	Next generation semiconductor based sequencing of bitter taste receptor genes in different pig populations and association analysis using a selective DNA pool-seq approach
Q90352506	Next-generation metrics for monitoring genetic erosion within populations of conservation concern
Q54090957	No Gut No Gain! Enteral Bile Acid Treatment Preserves Gut Growth but Not Parenteral Nutrition-Associated Liver Injury in a Novel Extensive Short Bowel Animal Model.
Q92362729	No imprinted XIST expression in pigs: biallelic XIST expression in early embryos and random X inactivation in placentas
Q92372539	Non-murine models to investigate tumor-immune interactions in head and neck cancer
Q36073051	Novel Insights into Chromosome Evolution in Birds, Archosaurs, and Reptiles
Q47852089	Novel Y-chromosome short tandem repeats in Sus scrofa and their variation in European wild boar and domestic pig populations
Q54209813	Novel and disruptive biological strategies for resolving gut health challenges in monogastric food animal production.
Q47805961	Novel effects of identified SNPs within the porcine Pregnancy-Associated Glycoprotein gene family (pPAGs) on the major reproductive traits in Hirschmann hybrid-line sows.
Q93370529	Of Mice, Dogs, Pigs, and Men: Choosing the Appropriate Model for Immuno-Oncology Research
Q58316366	Olfactory genes in Tibetan wild boar
Q86044094	Oligodeoxyribonucleotides derived from salmon sperm DNA: an alternative to defibrotide
Q86822774	On genetic differentiation between domestic pigs and Tibetan wild boars
Q35863738	On the importance of being structured: instantaneous coalescence rates and human evolution--lessons for ancestral population size inference?
Q37473811	On the relationship between an Asian haplotype on chromosome 6 that reduces androstenone levels in boars and the differential expression of SULT2A1 in the testis.
Q33752789	Oncopig Soft-Tissue Sarcomas Recapitulate Key Transcriptional Features of Human Sarcomas
Q38629720	Origin and dispersal of early domestic pigs in northern China
Q39411261	Origin of the retroviruses: when, where, and how?
Q58766476	PERVading strategies and infectious risk for clinical xenotransplantation
Q46279727	PIWIs, piRNAs and Retrotransposons: Complex battles during reprogramming in gametes and early embryos
Q35197483	PKD1 mono-allelic knockout is sufficient to trigger renal cystogenesis in a mini-pig model
Q101340092	PRE-1 Revealed Previous Unknown Introgression Events in Eurasian Boars during the Middle Pleistocene
Q36692219	PSMC analysis of effective population sizes in molecular ecology and its application to black-and-white Ficedula flycatchers
Q34879295	Pairwise comparisons of ten porcine tissues identify differential transcriptional regulation at the gene, isoform, promoter and transcription start site level
Q34985558	Pan-vertebrate comparative genomics unmasks retrovirus macroevolution
Q38163236	Pathways and genes involved in steroid hormone metabolism in male pigs: a review and update.
Q61124816	Penaeid shrimp genome provides insights into benthic adaptation and frequent molting
Q34461119	Phenotype and animal domestication: A study of dental variation between domestic, wild, captive, hybrid and insular Sus scrofa
Q90844956	Phylogenomic Resolution of the Cetacean Tree of Life Using Target Sequence Capture
Q98281240	Phylogeography of feral Monteiro pig in the Brazilian Pantanal Ecosystem
Q58415919	Pig Skin Includes Dendritic Cell Subsets Transcriptomically Related to Human CD1a and CD14 Dendritic Cells Presenting Different Migrating Behaviors and T Cell Activation Capacities
Q74441277	Pig geneticists go the whole hog
Q86081389	Pig genomics for biomedicine
Q38194510	Pig models of neurodegenerative disorders: Utilization in cell replacement-based preclinical safety and efficacy studies.
Q45854667	PigVar: a database of pig variations and positive selection signatures
Q38828712	Pigs as models of human cancers
Q45030843	Pigs in Toxicology: Breed Differences in Metabolism and Background Findings.
Q33894475	Pilot study of large-scale production of mutant pigs by ENU mutagenesis
Q35004703	Plasma proteome profiles associated with diet-induced metabolic syndrome and the early onset of metabolic syndrome in a pig model
Q40105153	Polymorphism and peptide-binding specificities of porcine major histocompatibility complex (MHC) class I molecules
Q40980588	Polymorphism in the intron 20 of porcine O-linked N-acetylglucosamine transferase
Q92082790	Polymorphism of the alpha-1-fucosyltransferase (FUT1) gene in several wild boar (Sus scrofa) populations in France and link to edema disease
Q92483450	Population Genomics Analysis Revealed Origin and High-altitude Adaptation of Tibetan Pigs
Q42377150	Population admixture in Chinese and European Sus scrofa.
Q34340373	Population history and genomic signatures for high-altitude adaptation in Tibetan pigs
Q48205813	Population size may shape the accumulation of functional mutations following domestication
Q35669019	Population structure and history of the Welsh sheep breeds determined by whole genome genotyping
Q41271645	Porcine EEF1A1 and EEF1A2 genes: genomic structure, polymorphism, mapping and expression.
Q92816277	Porcine Interferon Complex and Co-Evolution with Increasing Viral Pressure after Domestication
Q89528040	Porcine Liver Anatomy Applied to Biomedicine
Q64102628	Porcine Models of Pancreatic Cancer
Q53027243	Porcine NOD1 polymorphisms with impaired ligand recognition and their distribution in pig populations.
Q38662643	Porcine Reproductive and Respiratory Syndrome Virus (PRRSV): Pathogenesis and Interaction with the Immune System.
Q34430448	Porcine SLITRK1: Molecular cloning and characterization
Q47321127	Porcine Y-chromosome variation is consistent with the occurrence of paternal gene flow from non-Asian to Asian populations.
Q94603466	Porcine cancer models: potential tools to enhance cancer drug trials
Q54259668	Porcine cluster of differentiation (CD) markers 2018 update.
Q36713175	Porcine colonization of the Americas: a 60k SNP story.
Q95651741	Porcine cytokines, chemokines and growth factors: 2019 update
Q41039257	Porcine endogenous retrovirus-A/C: biochemical properties of its integrase and susceptibility to raltegravir.
Q33677528	Porcine endogenous retroviruses in xenotransplantation--molecular aspects
Q59351714	Porcine endogenous retroviruses: Quantification of the copy number in cell lines, pig breeds, and organs
Q92612325	Porcine models for studying complications and organ crosstalk in diabetes mellitus
Q59793596	Porcine single nucleotide polymorphisms and their functional effect: an update
Q37289654	Porcine synapsin 1: SYN1 gene analysis and functional characterization of the promoter
Q47136558	Porcine to Human Heart Transplantation: Is Clinical Application Now Appropriate?
Q36500054	Possible introgression of the VRTN mutation increasing vertebral number, carcass length and teat number from Chinese pigs into European pigs.
Q95293388	Potentiation of IL-4 Signaling by Retinoic Acid in Intestinal Epithelial Cells and Macrophages-Mechanisms and Targets
Q50436599	Pre-birth sense of smell in the wild boar: the ontogeny of the olfactory mucosa.
Q34551960	Precision engineering for PRRSV resistance in pigs: Macrophages from genome edited pigs lacking CD163 SRCR5 domain are fully resistant to both PRRSV genotypes while maintaining biological function
Q91757899	Preclinical study for treatment of hypospadias by advanced therapy medicinal products
Q97682892	Predicting survival and longevity of sows using purebred and crossbred data
Q30576979	Prediction of altered 3'- UTR miRNA-binding sites from RNA-Seq data: the swine leukocyte antigen complex (SLA) as a model region
Q28652656	Prehistoric genomes reveal the genetic foundation and cost of horse domestication
Q31118763	Production of cloned pigs with targeted attenuation of gene expression
Q36615751	Profiling the genome-wide DNA methylation pattern of porcine ovaries using reduced representation bisulfite sequencing
Q91868889	Proposed U.S. regulation of gene-edited food animals is not fit for purpose
Q37094215	Protein composition of bronchoalveolar lavage fluid and airway surface liquid from newborn pigs
Q94468094	Proteomic characterisation of drug metabolising enzymes and drug transporters in pig liver
Q38193379	Proteomics in farm animals models of human diseases
Q39697708	Quality Assessment of Domesticated Animal Genome Assemblies
Q42366667	Quantification of Focal Outflow Enhancement Using Differential Canalograms.
Q89008780	RAPID COMMUNICATION: A haplotype information theory method reveals genes of evolutionary interest in European vs. Asian pigs
Q34700379	RNA profiles of porcine embryos during genome activation reveal complex metabolic switch sensitive to in vitro conditions
Q55346288	RNA-Seq based transcriptome of whole blood from immunocompetent pigs (Sus scrofa) experimentally infected with Mycoplasma suis strain Illinois.
Q34951023	Recombination of the porcine X chromosome: a high density linkage map.
Q34558049	Reconstruction and evolutionary history of eutherian chromosomes
Q57021753	Reconstruction of avian ancestral karyotypes reveals differences in the evolutionary history of macro- and microchromosomes
Q28652271	Reconstruction of gross avian genome structure, organization and evolution suggests that the chicken lineage most closely resembles the dinosaur avian ancestor
Q35189423	Reduced Representation Libraries from DNA Pools Analysed with Next Generation Semiconductor Based-Sequencing to Identify SNPs in Extreme and Divergent Pigs for Back Fat Thickness
Q34548534	Regions of XY homology in the pig X chromosome and the boundary of the pseudoautosomal region.
Q27329450	Regions of homozygosity in the porcine genome: consequence of demography and the recombination landscape
Q91953431	RepSox Increases Porcine Cloning Efficiency by Improving Pluripotency of Donor Nuclei
Q57313972	Repeat associated mechanisms of genome evolution and function revealed by the Mus caroli and Mus pahari genomes
Q52644137	Repeat associated mechanisms of genome evolution and function revealed by the Mus caroli and Mus pahari genomes.
Q35570279	Repeated range expansions and inter-/postglacial recolonization routes of Sargentodoxa cuneata (Oliv.) Rehd. et Wils. (Lardizabalaceae) in subtropical China revealed by chloroplast phylogeography
Q86822770	Reply to 'Evolution of Tibetan wild boars'
Q48089777	Reply to 'Olfactory genes in Tibetan wild boar (NG-CR42819)'.
Q40619005	Resequencing diverse Chinese indigenous breeds to enrich the map of genomic variations in swine
Q36598433	Respiratory nanoparticle-based vaccines and challenges associated with animal models and translation
Q64065726	Retrotransposons evolution and impact on lncRNA and protein coding genes in pigs
Q36529977	Revealing new candidate genes for reproductive traits in pigs: combining Bayesian GWAS and functional pathways.
Q35549415	Review on porcine endogenous retrovirus detection assays--impact on quality and safety of xenotransplants
Q99417695	Revisiting the Pig IGHC Gene Locus in Different Breeds Uncovers Nine Distinct IGHG Genes
Q93270822	Robotic screening of intestinal drug absorption
Q93270827	Robotically handled whole-tissue culture system for the screening of oral drug formulations
Q34976026	Role of DNA methylation in expression and transmission of porcine endogenous retroviruses
Q36268119	Role of Toll-like receptors in diabetic renal lesions in a miniature pig model
Q38168653	Role of stem cells in large animal genetic engineering in the TALENs-CRISPR era.
Q39026800	Runs of homozygosity: current knowledge and applications in livestock.
Q34014590	SNPs detection in DHPS-WDR83 overlapping genes mapping on porcine chromosome 2 in a QTL region for meat pH.
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Q38842342	The evolution of the molecular response to stress and its relevance to trauma and stressor-related disorders
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Q112286459	The genome variation and developmental transcriptome maps reveal genetic differentiation of skeletal muscle in pigs
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Q34401955	The impact of whole-genome sequencing on the reconstruction of human population history
Q38113126	The new pig on the block: modelling cancer in pigs
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P6179	Dimensions Publication ID	1011485493
P356	DOI	10.1038/NATURE11622
P3181	OpenCitations bibliographic resource ID	74944
P932	PMC publication ID	3566564
P698	PubMed publication ID	23151582
P5875	ResearchGate publication ID	233418236

P50	author	Peter F. Stadler	Q2074784
		Jerzy Jurka	Q6185406
		Jun Wang	Q16027697
		Jonas Blomberg	Q16163502
		Max Rothschild	Q112460700
		Stephen Searle	Q115234882
		Jane Rogers	Q124137730
		Lawrence B. Schook	Q17198286
		Merete Fredholm	Q28778502
		Carol Churcher	Q28913746
		Jonathan V. Sweedler	Q29922178
		Greger Larson	Q30093085
		Miguel Perez-Enciso	Q30093093
		Hendrik-Jan Megens	Q30093096
		Lars Bolund	Q30111724
		Michael P Murtaugh	Q85582526
		Thomas Faraut	Q92237238
		Richard P. M. A. Crooijmans	Q108751913
		Kerstin Howe	Q30347505
		Guojie Zhang	Q30503057
		Toby Hunt	Q30503265
		Bronwen Aken	Q30503275
		James Gilbert	Q30504314
		Jane E Loveland	Q37615894
		Katherine Mann	Q54086358
		Katie E Fowler	Q54086363
		Kyle Schachtschneider	Q54086366
		William Chow	Q54086368
		John Schwartz	Q54086370
		Patric Jern	Q54086377
		Martien Groenen	Q56073514
		Frank Panitz	Q56234823
		Christian Anthon	Q56256659
		Craig W. Beattie	Q56526311
		Ronan Kapetanovic	Q56841623
		Bo Thomsen	Q56841626
		James M Reecy	Q57095519
		Claire Rogel-Gaillard	Q57340288
		Géraldine Pascal	Q57514413
		Darren K Griffin	Q59548770
		Laurent A. F. Frantz	Q59549575
		Simon White	Q60529812
		Jian Ma	Q62484740
		Jian Wang	Q67123678
		Hakim Tafer	Q37643768
		Kellye Eversole	Q37830442
		Ricardo Ramirez-Gonzalez	Q38155165
		Richard Leggett	Q38155191
		Heebal Kim	Q38590724
		Denise Carvalho-Silva	Q38624493
		Alan Archibald	Q40165843
		Jan Gorodkin	Q41050071
		Bertrand Servin	Q42760372
		Alexander Hayward	Q43085824
		Joao Fadista	Q43106051
		Mirte Bosse	Q46355586
		Christian Bendixen	Q47007066
		Susan Fairley	Q47502490
P2093	author name string	Matthew Jones
		Jie Zhang
		Jianguo Zhang
		Peixiang Ni
		Yao Lu
		Yingrui Li
		Xun Xu
		Stuart McLaren
		Yasuhiro Takeuchi
		Gary A Rohrer
		Frank Blecha
		Yongming Sang
		Zhi-Liang Hu
		Geoffrey J Faulkner
		Kyu-Won Kim
		Mario Caccamo
		Tae-Hun Kim
		Chankyu Park
		Jae-Hwan Kim
		Joshua G Schraiber
		Christopher K Tuggle
		Denis Milan
		Martine Yerle
		Patrick Chardon
		Harry D Dawson
		Hiroyuki Kanamori
		Denis M Larkin
		Harris A Lewin
		Henrik Hornshøj
		Jennifer L Harrow
		Shuhong Zhao
		Eung-Woo Park
		Bruce R Southey
		Kyung-Tai Lee
		Zhi-Qiang Du
		Elisabetta Giuffra
		Shengting Li
		Lucy Matthews
		Jaebum Kim
		Anna Anselmo
		Bouabid Badaoui
		Sara Botti
		Celine Chen
		Daniel Berman
		Eric Fritz
		Hirohide Uenishi
		Joan K Lunney
		Megan Bystrom
		Takeya Morozumi
		Nizar Drou
		Hong-Seog Park
		Sang-Haeng Choi
		Ole Madsen
		Yogesh Paudel
		Carol Scott
		Linda Scobie
		Patrice Dehais
		Loretta Auvil
		Jin-Tae Jeon
		Jitendra Narayan
		Bert Dibbits
		Wansheng Liu
		Richard C Clark
		Hyeonju Ahn
		Sandra Rodriguez-Zas
		Zhan Bujie
		Dinh Truong Nguyen
		Kyooyeol Lee
		Sean J Humphray
		Boris Capitanu
		Ryan Cheng
		Christopher Clee
		Suneel Onteru
		Rashmi Wali
		Fioravante De Sapio
		Goran Sperber
		Lauretta Rund
		Song-Jung Oh
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P433	issue	7424
P407	language of work or name	English	Q1860
P921	main subject	pig	Q787
		demographics	Q2725376
		demography	Q37732
P304	page(s)	393-8
P577	publication date	2012-11-15
P1433	published in	Nature	Q180445
P1476	title	Analyses of pig genomes provide insight into porcine demography and evolution
P478	volume	491

Analyses of pig genomes provide insight into porcine demography and evolution

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