| scholarly article | Q13442814 |
| P50 | author | Pablo J Ross | Q87324634 |
| P2093 | author name string | Y Wang | |
| H Zhou | |||
| C Kern | |||
| M E Delany | |||
| G Chanthavixay | |||
| M M Halstead | |||
| P Saelao | |||
| P2860 | cites work | Cell freezing protocol suitable for ATAC-Seq on motor neurons derived from human induced pluripotent stem cells. | Q36870902 |
| An improved ATAC-seq protocol reduces background and enables interrogation of frozen tissues. | Q38372097 | ||
| Multiplex single cell profiling of chromatin accessibility by combinatorial cellular indexing | Q40340878 | ||
| Time for the zebrafish ENCODE. | Q53649784 | ||
| Cutadapt removes adapter sequences from high-throughput sequencing reads | Q55953584 | ||
| Model-based analysis of ChIP-Seq (MACS) | Q21183902 | ||
| Differential expression analysis for sequence count data | Q21184103 | ||
| Analyses of pig genomes provide insight into porcine demography and evolution | Q22122156 | ||
| The accessible chromatin landscape of the human genome | Q24595581 | ||
| Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities | Q24617969 | ||
| DNase-seq: a high-resolution technique for mapping active gene regulatory elements across the genome from mammalian cells | Q24633746 | ||
| Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources | Q27860739 | ||
| The Sequence Alignment/Map format and SAMtools | Q27860966 | ||
| Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists | Q28131785 | ||
| Integrative analysis of the Caenorhabditis elegans genome by the modENCODE project | Q28301622 | ||
| deepTools2: a next generation web server for deep-sequencing data analysis | Q28597770 | ||
| Fast and accurate long-read alignment with Burrows-Wheeler transform | Q29547193 | ||
| BEDTools: a flexible suite of utilities for comparing genomic features | Q29547332 | ||
| STAR: ultrafast universal RNA-seq aligner | Q29615052 | ||
| A map of the cis-regulatory sequences in the mouse genome | Q29615404 | ||
| Identification of functional elements and regulatory circuits by Drosophila modENCODE | Q29617551 | ||
| Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position | Q34375601 | ||
| A comparative encyclopedia of DNA elements in the mouse genome | Q34700119 | ||
| Software for computing and annotating genomic ranges | Q34945230 | ||
| ATAC-seq: A Method for Assaying Chromatin Accessibility Genome-Wide | Q35220268 | ||
| fluff: exploratory analysis and visualization of high-throughput sequencing data | Q36108826 | ||
| A New Chicken Genome Assembly Provides Insight into Avian Genome Structure | Q36194303 | ||
| CTCF-mediated functional chromatin interactome in pluripotent cells | Q36218315 | ||
| P433 | issue | 1 | |
| P304 | page(s) | 5230 | |
| P577 | publication date | 2020-03-23 | |
| P1433 | published in | Scientific Reports | Q2261792 |
| P1476 | title | Systematic alteration of ATAC-seq for profiling open chromatin in cryopreserved nuclei preparations from livestock tissues | |
| P478 | volume | 10 |
Search more.