| scholarly article | Q13442814 |
| P50 | author | Anne Simon | Q4768799 |
| P2093 | author name string | Guohua Zhang | |
| Jiuchun Zhang | |||
| P2860 | cites work | Mfold web server for nucleic acid folding and hybridization prediction | Q24498105 |
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| The 5′ Untranslated Region of Alfalfa Mosaic Virus RNA 1 Is Involved in Negative-Strand RNA Synthesis | Q24644875 | ||
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| Stable RNA structures can repress RNA synthesis in vitro by the brome mosaic virus replicase | Q27472967 | ||
| De Novo Synthesis of Negative-Strand RNA by Dengue Virus RNA-Dependent RNA Polymerase In Vitro: Nucleotide, Primer, and Template Parameters | Q27477711 | ||
| Subgenomic replicons of the flavivirus Kunjin: construction and applications | Q27480783 | ||
| Significance in Replication of the Terminal Nucleotides of the Flavivirus Genome | Q27485661 | ||
| RNA motifs that determine specificity between a viral replicase and its promoter | Q27622488 | ||
| Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure | Q27860806 | ||
| An RNA domain within the 5' untranslated region of the tomato bushy stunt virus genome modulates viral RNA replication | Q28143191 | ||
| 3'-Terminal RNA secondary structures are important for accumulation of tomato bushy stunt virus DI RNAs | Q28204848 | ||
| Specific site selection in RNA resulting from a combination of nonspecific secondary structure and -CCR- boxes: initiation of minus strand synthesis by turnip yellow mosaic virus RNA-dependent RNA polymerase | Q28768518 | ||
| Switch from translation to RNA replication in a positive-stranded RNA virus | Q29617520 | ||
| Turnip crinkle virus coat protein mediates suppression of RNA silencing in Nicotiana benthamiana. | Q30332578 | ||
| The nucleotide sequence and genome organization of Japanese iris necrotic ring virus, a new species in the genus Carmovirus | Q30594944 | ||
| The genomic sequence of cardamine chlorotic fleck carmovirus | Q33391316 | ||
| Complete nucleotide sequence and genome organization of hibiscus chlorotic ringspot virus, a new member of the genus Carmovirus: evidence for the presence and expression of two novel open reading frames. | Q33801211 | ||
| Poliovirus 5'-terminal cloverleaf RNA is required in cis for VPg uridylylation and the initiation of negative-strand RNA synthesis | Q33848778 | ||
| Structural motifs in RNA. | Q33907399 | ||
| FUNCTIONS OF THE 3'-UNTRANSLATED REGIONS OF POSITIVE STRAND RNA VIRAL GENOMES. | Q33955934 | ||
| RNA-dependent RNA polymerases, viruses, and RNA silencing | Q33959192 | ||
| Synthesis of subgenomic RNAs by positive-strand RNA viruses | Q33966036 | ||
| Turnip crinkle virus defective interfering RNAs intensify viral symptoms and are generated de novo | Q34322205 | ||
| CCA initiation boxes without unique promoter elements support in vitro transcription by three viral RNA-dependent RNA polymerases | Q34362645 | ||
| The coat protein of turnip crinkle virus suppresses posttranscriptional gene silencing at an early initiation step | Q34462483 | ||
| Enhancer-like activity of a brome mosaic virus RNA promoter | Q34468969 | ||
| Analysis of sequences and predicted structures required for viral satellite RNA accumulation by in vivo genetic selection | Q34666446 | ||
| Fitness of a turnip crinkle virus satellite RNA correlates with a sequence-nonspecific hairpin and flanking sequences that enhance replication and repress the accumulation of virions | Q35105066 | ||
| RNA-dependent RNA polymerase from plants infected with turnip crinkle virus can transcribe (+)- and (-)-strands of virus-associated RNAs | Q35747489 | ||
| Polymerization of nontemplate bases before transcription initiation at the 3' ends of templates by an RNA-dependent RNA polymerase: an activity involved in 3' end repair of viral RNAs | Q35813510 | ||
| Synthesis of novel products in vitro by an RNA-dependent RNA polymerase | Q35840730 | ||
| Replication of the genomic RNA of a positive-strand RNA animal virus from negative-sense transcripts | Q35984283 | ||
| Altered 3'-terminal RNA structure in phage Qbeta adapted to host factor-less Escherichia coli | Q36584728 | ||
| A long-range pseudoknot in Qbeta RNA is essential for replication | Q38317824 | ||
| Recognition of the core RNA promoter for minus-strand RNA synthesis by the replicases of Brome mosaic virus and Cucumber mosaic virus | Q39585290 | ||
| Initiation of genomic plus-strand RNA synthesis from DNA and RNA templates by a viral RNA-dependent RNA polymerase. | Q39595192 | ||
| Comparison of turnip crinkle virus RNA-dependent RNA polymerase preparations expressed in Escherichia coli or derived from infected plants | Q39682478 | ||
| Nucleotide sequence and genome organization of carnation mottle virus RNA. | Q40471800 | ||
| In vitro RNA synthesis from exogenous dengue viral RNA templates requires long range interactions between 5'- and 3'-terminal regions that influence RNA structure | Q40605432 | ||
| Poliovirus RNA replication requires genome circularization through a protein-protein bridge | Q40791248 | ||
| Comparison of the replication of positive-stranded RNA viruses of plants and animals | Q41191980 | ||
| RNA elements required for RNA recombination function as replication enhancers in vitro and in vivo in a plus-strand RNA virus | Q41991405 | ||
| The virulent satellite RNA of turnip crinkle virus has a major domain homologous to the 3' end of the helper virus genome. | Q42069944 | ||
| RNA promoters located on (-)-strands of a subviral RNA associated with turnip crinkle virus. | Q42595190 | ||
| Turnip crinkle virus genes required for RNA replication and virus movement | Q42617449 | ||
| Open reading frames of turnip crinkle virus involved in satellite symptom expression and incompatibility with Arabidopsis thaliana ecotype Dijon. | Q42632298 | ||
| Nucleotide sequence and genomic organization of melon necrotic spot virus | Q42633851 | ||
| Genome organization and gene expression of saguaro cactus carmovirus | Q42651089 | ||
| Analysis of the two subgenomic RNA promoters for turnip crinkle virus in vivo and in vitro | Q42658179 | ||
| Molecular cloning and complete nucleotide sequence of galinsoga mosaic virus genomic RNA. | Q42674115 | ||
| The nucleotide sequence of cowpea mottle virus and its assignment to the genus Carmovirus | Q42678562 | ||
| The genome organization of pea stem necrosis virus and its assignment to the genus Carmovirus | Q42686802 | ||
| Involvement of a stem-loop structure in the location of junction sites in viral RNA recombination | Q43577483 | ||
| Requirement of a 5'-proximal linear sequence on minus strands for plus-strand synthesis of a satellite RNA associated with turnip crinkle virus | Q43649534 | ||
| Enhanced viral pathogenesis associated with a virulent mutant virus or a virulent satellite RNA correlates with reduced virion accumulation and abundance of free coat protein | Q45722396 | ||
| A multifunctional turnip crinkle virus replication enhancer revealed by in vivo functional SELEX. | Q45729410 | ||
| Analysis of cis-acting sequences involved in plus-strand synthesis of a turnip crinkle virus-associated satellite RNA identifies a new carmovirus replication element | Q45744041 | ||
| Symptom attenuation by a satellite RNA in vivo is dependent on reduced levels of virus coat protein | Q45748954 | ||
| A minimal RNA promoter for minus-strand RNA synthesis by the brome mosaic virus polymerase complex | Q45751191 | ||
| Minimal sequence and structural requirements of a subgenomic RNA promoter for turnip crinkle virus | Q45751635 | ||
| Replication, recombination, and symptom-modulation properties of the satellite RNAs of turnip crinkle virus | Q45751717 | ||
| Satellite RNA-mediated resistance to turnip crinkle virus in Arabidopsis involves a reduction in virus movement | Q45758999 | ||
| Analysis in vivo of turnip crinkle virus satellite RNA C variants with mutations in the 3'-terminal minus-strand promoter | Q45759041 | ||
| Sequences and structures required for recombination between virus-associated RNAs | Q45773331 | ||
| RNA sequence and secondary structural determinants in a minimal viral promoter that directs replicase recognition and initiation of genomic plus-strand RNA synthesis | Q56901988 | ||
| TYMV RNA replication in vivo: replicative intermediate is mainly single stranded. | Q64985142 | ||
| Coliphage Q beta RNA replication: RNA catalytic for single-strand release | Q67967107 | ||
| Requirement of a 3'-terminal stem-loop in in vitro transcription by an RNA-dependent RNA polymerase | Q71514715 | ||
| Interactions of Q beta replicase with Q beta RNA | Q71596985 | ||
| Internal and 3' RNA initiation by Qbeta replicase directed by CCA boxes | Q73910489 | ||
| P433 | issue | 14 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | virology | Q7215 |
| P304 | page(s) | 7619-33 | |
| P577 | publication date | 2004-07-01 | |
| P1433 | published in | Journal of Virology | Q1251128 |
| P1476 | title | Repression and derepression of minus-strand synthesis in a plus-strand RNA virus replicon | |
| P478 | volume | 78 |
| Q33666535 | 3' cap-independent translation enhancers of plant viruses |
| Q38347897 | 3'UTRs of carmoviruses |
| Q34121610 | A Y-shaped RNA structure in the 3' untranslated region together with the trans-activator and core promoter of Red clover necrotic mosaic virus RNA2 is required for its negative-strand RNA synthesis |
| Q24612511 | A cis-replication element functions in both orientations to enhance replication of Turnip crinkle virus |
| Q42134177 | A local, interactive network of 3' RNA elements supports translation and replication of Turnip crinkle virus |
| Q35024280 | A pseudoknot in a preactive form of a viral RNA is part of a structural switch activating minus-strand synthesis |
| Q40117263 | An RNA pseudoknot in the 3' end of the arterivirus genome has a critical role in regulating viral RNA synthesis |
| Q80357139 | Analysis of a viral replication repressor: sequence requirements for a large symmetrical internal loop |
| Q24564078 | Biased hypermutagenesis associated with mutations in an untranslated hairpin of an RNA virus |
| Q38934006 | Biologically-supported structural model for a viral satellite RNA. |
| Q44293470 | Characterization of the subgenomic RNAs produced by Pelargonium flower break virus: Identification of two novel RNAs species. |
| Q38373148 | Cis-acting RNA elements in positive-strand RNA plant virus genomes |
| Q34366788 | Conformational changes involved in initiation of minus-strand synthesis of a virus-associated RNA. |
| Q39963434 | Conformational organization of the 3' untranslated region in the tomato bushy stunt virus genome |
| Q42233054 | Construction and characterization of an aureusvirus defective RNA. |
| Q57477497 | Effects of deletion at the TTTSTTT motif of Hibiscus latent Singapore virus coat protein on viral replication and long-distance movement |
| Q38527965 | Evolution of a helper virus-derived, ribosome binding translational enhancer in an untranslated satellite RNA of Turnip crinkle virus. |
| Q34065793 | Evolution of virus-derived sequences for high-level replication of a subviral RNA |
| Q40010611 | Functional analysis of dengue virus cyclization sequences located at the 5' and 3'UTRs |
| Q37243494 | Genome cyclization as strategy for flavivirus RNA replication |
| Q42994223 | Heterologous RNA replication enhancer stimulates in vitro RNA synthesis and template-switching by the carmovirus, but not by the tombusvirus, RNA-dependent RNA polymerase: implication for modular evolution of RNA viruses |
| Q45407903 | Host-dependent effects of the 3' untranslated region of turnip crinkle virus RNA on accumulation in Hibiscus and Arabidopsis |
| Q45274477 | Importance of sequence and structural elements within a viral replication repressor |
| Q43157191 | Insights into the selective pressures restricting Pelargonium flower break virus genome variability: Evidence for host adaptation. |
| Q33877404 | Interplay of RNA elements in the dengue virus 5' and 3' ends required for viral RNA replication |
| Q27480301 | Long-Distance RNA-RNA Interactions in Plant Virus Gene Expression and Replication |
| Q35608747 | Long-distance RNA-RNA interactions between terminal elements and the same subset of internal elements on the potato virus X genome mediate minus- and plus-strand RNA synthesis |
| Q41859816 | Mechanism of stimulation of plus-strand synthesis by an RNA replication enhancer in a tombusvirus |
| Q34102733 | Multifaceted regulation of translational readthrough by RNA replication elements in a tombusvirus |
| Q33729917 | Population differentiation and selective constraints in Pelargonium line pattern virus |
| Q27490443 | RNA conformational changes in the life cycles of RNA viruses, viroids, and virus-associated RNAs |
| Q40339851 | RNA sequences and structures required for the recruitment and activity of the dengue virus polymerase |
| Q41738408 | Rapid evolution of in vivo-selected sequences and structures replacing 20% of a subviral RNA. |
| Q39694844 | Repair of lost 5' terminal sequences in tombusviruses: Rapid recovery of promoter- and enhancer-like sequences in recombinant RNAs |
| Q42582007 | Role of an internal and two 3'-terminal RNA elements in assembly of tombusvirus replicase |
| Q37747336 | Short internal sequences involved in replication and virion accumulation in a subviral RNA of turnip crinkle virus |
| Q35565999 | Small noncoding RNA modulates Japanese encephalitis virus replication and translation in trans |
| Q27658992 | Solution structure of the cap-independent translational enhancer and ribosome-binding element in the 3' UTR of turnip crinkle virus |
| Q45386714 | Structural and functional analyses of the 3' untranslated region of Bamboo mosaic virus satellite RNA. |
| Q36845765 | Structural domains within the 3' untranslated region of Turnip crinkle virus. |
| Q37033391 | Structural plasticity and rapid evolution in a viral RNA revealed by in vivo genetic selection. |
| Q81505302 | Structure and prevalence of replication silencer-3' terminus RNA interactions in Tombusviridae |
| Q41350827 | Structures required for poly(A) tail-independent translation overlap with, but are distinct from, cap-independent translation and RNA replication signals at the 3' end of Tobacco necrosis virus RNA |
| Q37850167 | Subgenomic messenger RNAs: mastering regulation of (+)-strand RNA virus life cycle |
| Q37344495 | The 3' end of Turnip crinkle virus contains a highly interactive structure including a translational enhancer that is disrupted by binding to the RNA-dependent RNA polymerase |
| Q34261428 | The 3' untranslated region of Pea Enation Mosaic Virus contains two T-shaped, ribosome-binding, cap-independent translation enhancers |
| Q33650386 | The 3'-terminal 55 nucleotides of bovine coronavirus defective interfering RNA harbor cis-acting elements required for both negative- and positive-strand RNA synthesis |
| Q112035378 | The Pseudo-Circular Genomes of Flaviviruses: Structures, Mechanisms, and Functions of Circularization |
| Q24520614 | The p92 polymerase coding region contains an internal RNA element required at an early step in Tombusvirus genome replication |
| Q33936195 | The terminal loop of a 3' proximal hairpin plays a critical role in replication and the structure of the 3' region of Turnip crinkle virus |
| Q36346845 | Translational control in positive strand RNA plant viruses |
| Q43775856 | Use of double-stranded RNA templates by the tombusvirus replicase in vitro: Implications for the mechanism of plus-strand initiation |
| Q64264559 | Variable 3'polyadenylation of Wheat yellow mosaic virus and its novel effects on translation and replication |
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