Secondary structure as a functional feature in the downstream region of mammalian polyadenylation signals

scientific article

Secondary structure as a functional feature in the downstream region of mammalian polyadenylation signals is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1128/MCB.24.7.2789-2796.2004
P932PMC publication ID371127
P698PubMed publication ID15024068

P2093author name stringJames C Alwine
Chunxiao Wu
P2860cites workThe human 64-kDa polyadenylylation factor contains a ribonucleoprotein-type RNA binding domain and unusual auxiliary motifsQ24301982
Cleavage and polyadenylation factor CPF specifically interacts with the pre-mRNA 3' processing signal AAUAAAQ24564625
RNA recognition by the human polyadenylation factor CstFQ24646013
Recognition of GU-rich polyadenylation regulatory elements by human CstF-64 proteinQ24671232
3'-End processing of pre-mRNA in eukaryotesQ28646658
Mechanism and regulation of mRNA polyadenylationQ29614774
Downstream sequence elements with different affinities for the hnRNP H/H' protein influence the processing efficiency of mammalian polyadenylation signalsQ33827197
Eukaryotic translation initiation: there are (at least) two sides to every storyQ33913449
Utilization of splicing elements and polyadenylation signal elements in the coupling of polyadenylation and last-intron removalQ33958705
Characterization of specific protein-RNA complexes associated with the coupling of polyadenylation and last-intron removalQ34282553
On the recognition of helical RNA by cobra venom V1 nuclease.Q34383792
The G-rich auxiliary downstream element has distinct sequence and position requirements and mediates efficient 3' end pre-mRNA processing through a trans-acting factorQ34749544
Downstream elements of mammalian pre-mRNA polyadenylation signals: primary, secondary and higher-order structures.Q34759787
Cleavage site determinants min the mammalian polydenylation signalQ34762164
The consensus sequence YGTGTTYY located downstream from the AATAAA signal is required for efficient formation of mRNA 3' terminiQ36136653
The cap and the 3' splice site similarly affect polyadenylation efficiencyQ36559866
Definition of the upstream efficiency element of the simian virus 40 late polyadenylation signal by using in vitro analysesQ36706227
Efficiency of utilization of the simian virus 40 late polyadenylation site: effects of upstream sequencesQ36761958
Sequences downstream of AAUAAA signals affect pre-mRNA cleavage and polyadenylation in vitro both directly and indirectlyQ36764593
A uridylate tract mediates efficient heterogeneous nuclear ribonucleoprotein C protein-RNA cross-linking and functionally substitutes for the downstream element of the polyadenylation signalQ36774538
The C proteins of heterogeneous nuclear ribonucleoprotein complexes interact with RNA sequences downstream of polyadenylation cleavage sitesQ36847550
Identification of a sequence element on the 3' side of AAUAAA which is necessary for simian virus 40 late mRNA 3'-end processing.Q36894844
Identification of a complex associated with processing and polyadenylation in vitro of herpes simplex virus type 1 thymidine kinase precursor RNAQ36921323
Sequences on the 3' side of hexanucleotide AAUAAA affect efficiency of cleavage at the polyadenylation site.Q36946265
ATTAAA as well as downstream sequences are required for RNA 3'-end formation in the E3 complex transcription unit of adenovirusQ36951615
A sequence downstream of A-A-U-A-A-A is required for formation of simian virus 40 late mRNA 3' termini in frog oocytesQ37691120
Functionally significant secondary structure of the simian virus 40 late polyadenylation signalQ39452272
DSEF-1 is a member of the hnRNP H family of RNA-binding proteins and stimulates pre-mRNA cleavage and polyadenylation in vitroQ39725791
An RNA secondary structure juxtaposes two remote genetic signals for human T-cell leukemia virus type I RNA 3'-end processingQ40106958
An RNA-binding protein specifically interacts with a functionally important domain of the downstream element of the simian virus 40 late polyadenylation signalQ40641554
Poly(A) tail metabolism and function in eucaryotes.Q40774617
Sequences capable of restoring poly(A) site function define two distinct downstream elements.Q42574256
A stem-loop of Tetrahymena telomerase RNA distant from the template potentiates RNA folding and telomerase activityQ43636619
Patterns of cleavages induced by lead ions in defined RNA secondary structure motifs.Q54147024
Requirement of a downstream sequence for generation of a poly(A) addition siteQ64380598
Site-specific polyadenylation in a cell-free reactionQ64380699
Characterization of the multisubunit cleavage-polyadenylation specificity factor from calf thymusQ68214796
The biochemistry of polyadenylationQ71392048
P433issue7
P407language of work or nameEnglishQ1860
P921main subjectcell biologyQ7141
P304page(s)2789-96
P577publication date2004-04-01
P1433published inMolecular and Cellular BiologyQ3319478
P1476titleSecondary structure as a functional feature in the downstream region of mammalian polyadenylation signals
P478volume24