High-resolution mapping of plasmid transcriptomes in different host bacteria

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High-resolution mapping of plasmid transcriptomes in different host bacteria is …
instance of (P31):
scholarly articleQ13442814

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P6179Dimensions Publication ID1029427465
P356DOI10.1186/1471-2164-10-12
P932PMC publication ID2642839
P698PubMed publication ID19134166
P5875ResearchGate publication ID23768889

P50authorMasaki ShintaniQ38318953
Hideaki NojiriQ38318971
Masatoshi MiyakoshiQ58211926
P2093author name stringHiromi Nishida
Hisakazu Yamane
P2860cites workComplete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440Q22121951
Distribution and evolution of von Willebrand/integrin A domains: widely dispersed domains with roles in cell adhesion and elsewhereQ24537227
Novel RNAs identified from an in-depth analysis of the transcriptome of human chromosomes 21 and 22Q24594479
Primer3 on the WWW for general users and for biologist programmersQ27861030
RNA expression analysis using a 30 base pair resolution Escherichia coli genome arrayQ28139158
Genome-wide transcription and the implications for genomic organizationQ29617047
Gene expression analysis indicates extensive genotype-specific crosstalk between the conjugative F-plasmid and the E. coli chromosomeQ30823734
Dark matter in the genome: evidence of widespread transcription detected by microarray tiling experimentsQ34386366
Characterization of the replication, maintenance, and transfer features of the IncP-7 plasmid pCAR1, which carries genes involved in carbazole and dioxin degradation.Q34649437
ACLAME: a CLAssification of Mobile genetic ElementsQ34932251
Mobile genetic elements: the agents of open source evolutionQ36247081
Transcription regulatory circuits in bacterial plasmidsQ36638933
Transcriptome analysis of Pseudomonas putida KT2440 harboring the completely sequenced IncP-7 plasmid pCAR1Q38299459
High-throughput identification of transcription start sites, conserved promoter motifs and predicted regulons.Q38303172
Genetic characterization and evolutionary implications of a car gene cluster in the carbazole degrader Pseudomonas sp. strain CA10.Q39503764
Complete nucleotide sequence of plasmid Rts1: implications for evolution of large plasmid genomesQ39679378
Genomic and functional analyses of SXT, an integrating antibiotic resistance gene transfer element derived from Vibrio choleraeQ39679833
R391: a conjugative integrating mosaic comprised of phage, plasmid, and transposon elementsQ39680259
Transcriptional regulation of the ant operon, encoding two-component anthranilate 1,2-dioxygenase, on the carbazole-degradative plasmid pCAR1 of Pseudomonas resinovorans strain CA10.Q40175807
Transcriptional control of the Pseudomonas TOL plasmid catabolic operons is achieved through an interplay of host factors and plasmid-encoded regulatorsQ41620651
The complete nucleotide sequence of the resistance plasmid R478: defining the backbone components of incompatibility group H conjugative plasmids through comparative genomicsQ42169764
Complete nucleotide sequence of carbazole/dioxin-degrading plasmid pCAR1 in Pseudomonas resinovorans strain CA10 indicates its mosaicity and the presence of large catabolic transposon Tn4676.Q42693452
Complete nucleotide sequence and organization of the naphthalene catabolic plasmid pND6-1 from Pseudomonas sp. strain ND6.Q44972467
Large plasmid pCAR2 and class II transposon Tn4676 are functional mobile genetic elements to distribute the carbazole/dioxin-degradative car gene cluster in different bacteriaQ46459432
Recipient range of IncP-7 conjugative plasmid pCAR2 from Pseudomonas putida HS01 is broader than from other Pseudomonas strains.Q46836384
Differentiation of carbazole catabolic operons by replacement of the regulated promoter via transposition of an insertion sequenceQ46925583
Complete sequence determination combined with analysis of transposition/site-specific recombination events to explain genetic organization of IncP-7 TOL plasmid pWW53 and related mobile genetic elements.Q48080352
An H-NS-like stealth protein aids horizontal DNA transmission in bacteriaQ50074297
MoxR AAA+ ATPases: a novel family of molecular chaperones?Q83294358
P433issue1
P407language of work or nameEnglishQ1860
P921main subjecttranscriptomeQ252857
P304page(s)12
P577publication date2009-01-09
P1433published inBMC GenomicsQ15765854
P1476titleHigh-resolution mapping of plasmid transcriptomes in different host bacteria
P478volume10

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cites work (P2860)
Q38109292Exploring the costs of horizontal gene transfer.
Q38296480High-resolution analysis of the m-xylene/toluene biodegradation subtranscriptome of Pseudomonas putida mt-2.
Q41437380Inhibition of Pseudomonas aeruginosa swarming motility by 1-naphthol and other bicyclic compounds bearing hydroxyl groups.
Q42663815Modulation of primary cell function of host Pseudomonas bacteria by the conjugative plasmid pCAR1.
Q36497535MvaT Family Proteins Encoded on IncP-7 Plasmid pCAR1 and the Host Chromosome Regulate the Host Transcriptome Cooperatively but Differently
Q36475168Overview of biological database mapping services for interoperation between different 'omics' datasets
Q34119223Pmr, a histone-like protein H1 (H-NS) family protein encoded by the IncP-7 plasmid pCAR1, is a key global regulator that alters host function
Q37974625Structural and molecular genetic analyses of the bacterial carbazole degradation system.
Q37318464TAAPP: Tiling Array Analysis Pipeline for Prokaryotes
Q39080041The behavior of mobile genetic elements (MGEs) in different environments
Q41907983The presence of conjugative plasmid pLS20 affects global transcription of Its Bacillus subtilis host and confers beneficial stress resistance to cells.
Q97067481Transcriptome Analysis of Zygotic Induction During Conjugative Transfer of Plasmid RP4
Q33588090Transcriptome analysis of the mobile genome ICEclc in Pseudomonas knackmussii B13.

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