| scholarly article | Q13442814 |
| P50 | author | Masatoshi Miyakoshi | Q58211926 |
| Masaki Shintani | Q38318953 | ||
| Hideaki Nojiri | Q38318971 | ||
| P2093 | author name string | Hisakazu Yamane | |
| Tsuguno Terabayashi | |||
| Satoshi Kai | |||
| P2860 | cites work | Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440 | Q22121951 |
| Identification of anthranilate and benzoate metabolic operons of Pseudomonas fluorescens and functional characterization of their promoter regions | Q25255602 | ||
| Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors | Q26778475 | ||
| Primer3 on the WWW for general users and for biologist programmers | Q27861030 | ||
| Exploration, normalization, and summaries of high density oligonucleotide array probe level data | Q27861098 | ||
| Complete nucleotide sequence and organization of the atrazine catabolic plasmid pADP-1 from Pseudomonas sp. strain ADP | Q28349622 | ||
| Microbial pathogenesis in cystic fibrosis: co-ordinate regulation of heat-shock response and conversion to mucoidy in Pseudomonas aeruginosa | Q28492638 | ||
| Deletion of algK in mucoid Pseudomonas aeruginosa blocks alginate polymer formation and results in uronic acid secretion | Q28492785 | ||
| RamB, a novel transcriptional regulator of genes involved in acetate metabolism of Corynebacterium glutamicum | Q28854133 | ||
| Four new derivatives of the broad-host-range cloning vector pBBR1MCS, carrying different antibiotic-resistance cassettes | Q29615258 | ||
| Small mobilizable multi-purpose cloning vectors derived from the Escherichia coli plasmids pK18 and pK19: selection of defined deletions in the chromosome of Corynebacterium glutamicum | Q29615259 | ||
| Microbial pathogenesis in cystic fibrosis: mucoid Pseudomonas aeruginosa and Burkholderia cepacia | Q29615286 | ||
| The orphan response regulator DigR is required for synthesis of extracellular matrix fibrils in Myxococcus xanthus | Q30477459 | ||
| Analysis of aromatic catabolic pathways in Pseudomonas putida KT 2440 using a combined proteomic approach: 2-DE/MS and cleavable isotope-coded affinity tag analysis | Q33233614 | ||
| Analysis of the proteome of Pseudomonas putida KT2440 grown on different sources of carbon and energy | Q33233891 | ||
| Proteome analysis of cellular response of Pseudomonas putida KT2440 to tetracycline stress | Q33249562 | ||
| Plasmid and chromosome partitioning: surprises from phylogeny | Q33912681 | ||
| The bacterial enhancer-dependent sigma(54) (sigma(N)) transcription factor | Q33968426 | ||
| BenR, a XylS homologue, regulates three different pathways of aromatic acid degradation in Pseudomonas putida | Q33994918 | ||
| A superfamily of ATPases with diverse functions containing either classical or deviant ATP-binding motif | Q34061782 | ||
| Organization and transcriptional characterization of catechol degradation genes involved in carbazole degradation by Pseudomonas resinovorans strain CA10. | Q34130691 | ||
| Site-specific recombination system encoded by toluene catabolic transposon Tn4651 | Q34317599 | ||
| Genes and their organization in the replication origin region of the bacterial chromosome | Q34365476 | ||
| Characterization of the replication, maintenance, and transfer features of the IncP-7 plasmid pCAR1, which carries genes involved in carbazole and dioxin degradation. | Q34649437 | ||
| The positioning of cytoplasmic protein clusters in bacteria | Q34650313 | ||
| Insights into the genomic basis of niche specificity of Pseudomonas putida KT2440. | Q45160570 | ||
| BzdR, a repressor that controls the anaerobic catabolism of benzoate in Azoarcus sp. CIB, is the first member of a new subfamily of transcriptional regulators | Q45213283 | ||
| Large plasmid pCAR2 and class II transposon Tn4676 are functional mobile genetic elements to distribute the carbazole/dioxin-degradative car gene cluster in different bacteria | Q46459432 | ||
| Inferring the genetic network of m-xylene metabolism through expression profiling of the xyl genes of Pseudomonas putida mt-2. | Q46680771 | ||
| Recipient range of IncP-7 conjugative plasmid pCAR2 from Pseudomonas putida HS01 is broader than from other Pseudomonas strains. | Q46836384 | ||
| Differentiation of carbazole catabolic operons by replacement of the regulated promoter via transposition of an insertion sequence | Q46925583 | ||
| Complete sequence determination combined with analysis of transposition/site-specific recombination events to explain genetic organization of IncP-7 TOL plasmid pWW53 and related mobile genetic elements. | Q48080352 | ||
| Molecular characterization of Pseudomonas putida KT2440 rpoH gene regulation | Q48368563 | ||
| Sequence of cro gene of bacteriophage lambda | Q48417152 | ||
| Autoregulation and function of a repressor in bacteriophage lambda | Q48417713 | ||
| The sigma54 regulon (sigmulon) of Pseudomonas putida | Q50102115 | ||
| The m-xylene biodegradation capacity of Pseudomonas putida mt-2 is submitted to adaptation to abiotic stresses: evidence from expression profiling of xyl genes. | Q51586952 | ||
| The parAB gene products of Pseudomonas putida exhibit partition activity in both P. putida and Escherichia coli. | Q52123751 | ||
| MipZ, a spatial regulator coordinating chromosome segregation with cell division in Caulobacter. | Q53611653 | ||
| A 10-min method for preparation of highly electrocompetent Pseudomonas aeruginosa cells: application for DNA fragment transfer between chromosomes and plasmid transformation. | Q53853281 | ||
| Specific-purpose plasmid cloning vectors II. Broad host range, high copy number, RSF 1010-derived vectors, and a host-vector system for gene cloning in Pseudomonas | Q54528042 | ||
| Detection of multiple extracytoplasmic function (ECF) sigma factors in the genome of Pseudomonas putida KT2440 and their counterparts in Pseudomonas aeruginosa PA01. | Q54531878 | ||
| Growth phase-dependent expression of the Pseudomonas putida KT2440 transcriptional machinery analysed with a genome-wide DNA microarray. | Q55041464 | ||
| MvaT proteins in Pseudomonas spp.: a novel class of H-NS-like proteins | Q57176930 | ||
| Critical Nucleotides in the Upstream Region of the XylS-dependent TOLmeta-Cleavage Pathway Operon Promoter as Deduced from Analysis of Mutants | Q57340435 | ||
| Homology among DNA-binding proteins suggests use of a conserved super-secondary structure | Q59059585 | ||
| Chromosome loss from par mutants of Pseudomonas putida depends on growth medium and phase of growth | Q77607646 | ||
| The third chemotaxis locus of Rhodobacter sphaeroides is essential for chemotaxis | Q78487579 | ||
| High-resolution crystal structure of the restriction-modification controller protein C.AhdI from Aeromonas hydrophila | Q81405854 | ||
| Bacterial chromosome segregation | Q81644953 | ||
| Pseudomonas putida KT2440 responds specifically to chlorophenoxy herbicides and their initial metabolites | Q83198230 | ||
| Genomic and functional analysis of the IncP-9 naphthalene-catabolic plasmid NAH7 and its transposon Tn4655 suggests catabolic gene spread by a tyrosine recombinase | Q34696950 | ||
| Pedigree and taxonomic credentials of Pseudomonas putida strain KT2440. | Q35048078 | ||
| Control of rpoS transcription in Escherichia coli and Pseudomonas: why so different? | Q35161491 | ||
| Recruitment of terminal protein to the ends of Streptomyces linear plasmids and chromosomes by a novel telomere-binding protein essential for linear DNA replication | Q35964489 | ||
| The Bacillus subtilis sin gene, a regulator of alternate developmental processes, codes for a DNA-binding protein | Q36125587 | ||
| A family of regulatory genes associated with type II restriction-modification systems | Q36130467 | ||
| The evolution of IncP catabolic plasmids. | Q36165508 | ||
| Involvement of Pseudomonas putida RpoN sigma factor in regulation of various metabolic functions | Q36180646 | ||
| Plasmid segregation mechanisms | Q36312215 | ||
| Structure of Haloacetate-Catabolic IncP-1β Plasmid pUO1 and Genetic Mobility of Its Residing Haloacetate-Catabolic Transposon | Q37052103 | ||
| A spontaneous translational fusion of Bacillus cereus PlcR and PapR activates transcription of PlcR-dependent genes in Bacillus anthracis via binding with a specific palindromic sequence | Q37523863 | ||
| The completely sequenced plasmid pEST4011 contains a novel IncP1 backbone and a catabolic transposon harboring tfd genes for 2,4-dichlorophenoxyacetic acid degradation | Q37583361 | ||
| ClgR, a novel regulator of clp and lon expression in Streptomyces | Q37735578 | ||
| Genetic characterization and evolutionary implications of a car gene cluster in the carbazole degrader Pseudomonas sp. strain CA10. | Q39503764 | ||
| Involvement of sigma(S) in starvation-induced transposition of Pseudomonas putida transposon Tn4652. | Q39504849 | ||
| Regulation of the transposase of Tn4652 by the transposon-encoded protein TnpC. | Q39548351 | ||
| Expression of the transposase gene tnpA of Tn4652 is positively affected by integration host factor. | Q39566174 | ||
| Inactivation of cytochrome o ubiquinol oxidase relieves catabolic repression of the Pseudomonas putida GPo1 alkane degradation pathway | Q39679675 | ||
| Compilation and analysis of sigma(54)-dependent promoter sequences | Q39729488 | ||
| Toluene transposons Tn4651 and Tn4653 are class II transposons | Q39948254 | ||
| Transcriptional regulation of the ant operon, encoding two-component anthranilate 1,2-dioxygenase, on the carbazole-degradative plasmid pCAR1 of Pseudomonas resinovorans strain CA10. | Q40175807 | ||
| Analysis and construction of stable phenotypes in gram-negative bacteria with Tn5- and Tn10-derived minitransposons | Q40687515 | ||
| The beta-ketoadipate pathway and the biology of self-identity | Q41199628 | ||
| Transcriptional control of the Pseudomonas TOL plasmid catabolic operons is achieved through an interplay of host factors and plasmid-encoded regulators | Q41620651 | ||
| Genetic organization of the catabolic plasmid pJP4 from Ralstonia eutropha JMP134 (pJP4) reveals mechanisms of adaptation to chloroaromatic pollutants and evolution of specialized chloroaromatic degradation pathways | Q42628960 | ||
| Characterisation of a repressor gene (xre) and a temperature-sensitive allele from the Bacillus subtilis prophage, PBSX. | Q42630512 | ||
| Complete sequence and genetic organization of pDTG1, the 83 kilobase naphthalene degradation plasmid from Pseudomonas putida strain NCIB 9816-4. | Q42632647 | ||
| Transcription analysis of rpoH in Pseudomonas putida | Q42665683 | ||
| Complete sequence of the IncP-9 TOL plasmid pWW0 from Pseudomonas putida | Q42692935 | ||
| Complete nucleotide sequence of carbazole/dioxin-degrading plasmid pCAR1 in Pseudomonas resinovorans strain CA10 indicates its mosaicity and the presence of large catabolic transposon Tn4676. | Q42693452 | ||
| The cyo operon of Pseudomonas putida is involved in carbon catabolite repression of phenol degradation | Q43781874 | ||
| Transcriptional tradeoff between metabolic and stress-response programs in Pseudomonas putida KT2440 cells exposed to toluene | Q44100060 | ||
| Travels of a Pseudomonas, from Japan around the world | Q44282469 | ||
| Genomic analysis of the aromatic catabolic pathways from Pseudomonas putida KT2440. | Q44282474 | ||
| Complete nucleotide sequence and organization of the naphthalene catabolic plasmid pND6-1 from Pseudomonas sp. strain ND6. | Q44972467 | ||
| Insights into Pseudomonas putida KT2440 response to phenol-induced stress by quantitative proteomics | Q45047901 | ||
| Isolation and characterization of genes encoding polycyclic aromatic hydrocarbon dioxygenase from acenaphthene and acenaphthylene degrading Sphingomonas sp. strain A4. | Q45052516 | ||
| P433 | issue | 19 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | transcriptome | Q252857 |
| Pseudomonas putida | Q2738168 | ||
| P1104 | number of pages | 12 | |
| P304 | page(s) | 6849-6860 | |
| P577 | publication date | 2007-08-03 | |
| P1433 | published in | Journal of Bacteriology | Q478419 |
| P1476 | title | Transcriptome analysis of Pseudomonas putida KT2440 harboring the completely sequenced IncP-7 plasmid pCAR1 | |
| P478 | volume | 189 |
| Q97521301 | A Novel Small RNA on the Pseudomonas putida KT2440 Chromosome Is Involved in the Fitness Cost Imposed by IncP-1 Plasmid RP4 |
| Q45987711 | An improved method to extract RNA from soil with efficient removal of humic acids. |
| Q57340318 | Bacterial chemotaxis towards aromatic hydrocarbons in Pseudomonas |
| Q28482500 | Benzoxazinoids in root exudates of maize attract Pseudomonas putida to the rhizosphere |
| Q41370489 | Carbazole-degradative IncP-7 plasmid pCAR1.2 is structurally unstable in Pseudomonas fluorescens Pf0-1, which accumulates catechol, the intermediate of the carbazole degradation pathway |
| Q35221153 | Effects of three different nucleoid-associated proteins encoded on IncP-7 plasmid pCAR1 on host Pseudomonas putida KT2440. |
| Q41558018 | Growth phase-dependent expression profiles of three vital H-NS family proteins encoded on the chromosome of Pseudomonas putida KT2440 and on the pCAR1 plasmid |
| Q24653329 | High-resolution mapping of plasmid transcriptomes in different host bacteria |
| Q89511205 | Horizontally Acquired Homologs of Xenogeneic Silencers: Modulators of Gene Expression Encoded by Plasmids, Phages and Genomic Islands |
| Q37986491 | Industrial biotechnology of Pseudomonas putida and related species |
| Q42663815 | Modulation of primary cell function of host Pseudomonas bacteria by the conjugative plasmid pCAR1. |
| Q36497535 | MvaT Family Proteins Encoded on IncP-7 Plasmid pCAR1 and the Host Chromosome Regulate the Host Transcriptome Cooperatively but Differently |
| Q34119223 | Pmr, a histone-like protein H1 (H-NS) family protein encoded by the IncP-7 plasmid pCAR1, is a key global regulator that alters host function |
| Q38060811 | Tactic responses to pollutants and their potential to increase biodegradation efficiency. |
| Q42777524 | The CTX-M-14 plasmid pHK01 encodes novel small RNAs and influences host growth and motility. |
| Q54261857 | The Pseudomonas aeruginosa PrrF1 and PrrF2 Small Regulatory RNAs Promote 2-Alkyl-4-Quinolone Production through Redundant Regulation of the antR mRNA. |
| Q39080041 | The behavior of mobile genetic elements (MGEs) in different environments |
| Q41907983 | The presence of conjugative plasmid pLS20 affects global transcription of Its Bacillus subtilis host and confers beneficial stress resistance to cells. |
| Q97067481 | Transcriptome Analysis of Zygotic Induction During Conjugative Transfer of Plasmid RP4 |
Search more.