An improved method to extract RNA from soil with efficient removal of humic acids.

scientific article published on 30 March 2009

An improved method to extract RNA from soil with efficient removal of humic acids. is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1111/J.1365-2672.2009.04298.X
P698PubMed publication ID19486421
P5875ResearchGate publication ID26257211

P2093author name stringY Wang
S Morimoto
T Fujii
N Ogawa
T Oomori
P2860cites workComplete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440Q22121951
mRNA extraction and reverse transcription-PCR protocol for detection of nifH gene expression by Azotobacter vinelandii in soilQ24675567
Identification of novel bacterial lineages as active members of microbial populations in a freshwater sediment using a rapid RNA extraction procedure and RT-PCR.Q30759926
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Mechanisms underlying the impact of humic acids on DNA quantification by SYBR Green I and consequences for the analysis of soils and aquatic sedimentsQ33186494
Identification of novel benzoylformate decarboxylases by growth selectionQ33259009
The presence of humic substances and DNA in RNA extracts affects hybridization resultsQ33987907
Simultaneous recovery of RNA and DNA from soils and sedimentsQ33990411
BenR, a XylS homologue, regulates three different pathways of aromatic acid degradation in Pseudomonas putidaQ33994918
Microbial genes and enzymes in the degradation of chlorinated compoundsQ35192968
Transcriptome analysis of Pseudomonas putida KT2440 harboring the completely sequenced IncP-7 plasmid pCAR1Q38299459
Biofilm formation and cellulose expression among diverse environmental Pseudomonas isolatesQ38508594
Rapid method for coextraction of DNA and RNA from natural environments for analysis of ribosomal DNA- and rRNA-based microbial community compositionQ39488821
Functional genomics of stress response in Pseudomonas putida KT2440.Q41671483
Simultaneous catabolite repression between glucose and toluene metabolism in Pseudomonas putida is channeled through different signaling pathways.Q42637200
The chlorocatechol degradative genes, tfdT-CDEF, of Burkholderia sp. strain NK8 are involved in chlorobenzoate degradation and induced by chlorobenzoates and chlorocatecholsQ43614720
RNA isolation from soil for bacterial community and functional analysis: evaluation of different extraction and soil conservation protocolsQ44074113
Genomic analysis of the aromatic catabolic pathways from Pseudomonas putida KT2440.Q44282474
Characterization and biological activities of humic substances from mumie.Q44554611
Real-time PCR quantification of a green fluorescent protein-labeled, genetically engineered Pseudomonas putida strain during 2-chlorobenzoate degradation in soilQ44829313
Detection of bphAa gene expression of Rhodococcus sp. strain RHA1 in soil using a new method of RNA preparation from soilQ46716015
Limited diffusive fluxes of substrate facilitate coexistence of two competing bacterial strainsQ46724240
Molecular weight characteristics of humic substances from different environments as determined by size exclusion chromatography and their statistical evaluationQ47449514
Quantification of gene expression in methanotrophs by competitive reverse transcription-polymerase chain reactionQ47982203
Conjugative transfer of the IncP-7 carbazole degradative plasmid, pCAR1, in river water samples.Q50676996
Specific-purpose plasmid cloning vectors II. Broad host range, high copy number, RSF 1010-derived vectors, and a host-vector system for gene cloning in PseudomonasQ54528042
Growth phase-dependent expression of the Pseudomonas putida KT2440 transcriptional machinery analysed with a genome-wide DNA microarray.Q55041464
Towards a universally adaptable method for quantitative extraction of high-purity nucleic acids from soilQ57702122
A molecular method to evaluate basidiomycete laccase gene expression in forest soilsQ57702143
P433issue4
P304page(s)1168-1177
P577publication date2009-03-30
P1433published inJournal of Applied MicrobiologyQ15756992
P1476titleAn improved method to extract RNA from soil with efficient removal of humic acids.
P478volume107

Reverse relations

cites work (P2860)
Q41973710A novel method for RNA extraction from Andosols using casein and its application to amoA gene expression study in soil
Q52970126A putative porin gene of Burkholderia sp. NK8 involved in chemotaxis toward β-ketoadipate.
Q57121109Assimilation of acetate by the putative atmospheric methane oxidizers belonging to the USCα clade
Q35929028Estimates of Soil Bacterial Ribosome Content and Diversity Are Significantly Affected by the Nucleic Acid Extraction Method Employed
Q54388546Evaluation of methods of determining humic acids in nucleic acid samples for molecular biological analysis.
Q33674798Extraction of bacterial RNA from soil: challenges and solutions
Q35001990Method for RNA extraction and cDNA library construction from microbes in crop rhizosphere soil
Q33918934Soil-specific limitations for access and analysis of soil microbial communities by metagenomics