| scholarly article | Q13442814 |
| review article | Q7318358 |
| P2093 | author name string | M. Hariharan | |
| M. P. Snyder | |||
| W. W. Soon | |||
| P2860 | cites work | Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project | Q21061203 |
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| Tumor heterogeneity | Q34257678 | ||
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| Copy number polymorphism in Fcgr3 predisposes to glomerulonephritis in rats and humans | Q34495131 | ||
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| Mapping networks of physical interactions between genomic elements using 5C technology | Q34578862 | ||
| Single-cell exome sequencing and monoclonal evolution of a JAK2-negative myeloproliferative neoplasm | Q39386631 | ||
| Development of a low-cost magnetic microfluidic chip for circulating tumour cell capture | Q39431718 | ||
| Mapping open chromatin with formaldehyde-assisted isolation of regulatory elements | Q39474805 | ||
| Efficient capture of circulating tumor cells with a novel immunocytochemical microfluidic device | Q39608338 | ||
| Population context determines cell-to-cell variability in endocytosis and virus infection | Q39807636 | ||
| High-throughput bisulfite sequencing in mammalian genomes | Q40351906 | ||
| Class I histone deacetylase-selective novel synthetic inhibitors potently inhibit human tumor proliferation | Q40527947 | ||
| A worldwide survey of haplotype variation and linkage disequilibrium in the human genome | Q42601487 | ||
| Global histone modification patterns predict risk of prostate cancer recurrence | Q46162501 | ||
| The gene encoding phosphodiesterase 4D confers risk of ischemic stroke | Q48185073 | ||
| Single-cell analysis: The deepest differences. | Q48531784 | ||
| Rapid isolation and detection of cancer cells by utilizing integrated microfluidic systems. | Q51554299 | ||
| Isolation of endothelial cells from fresh tissues. | Q51954306 | ||
| Cytokeratin labeling of breast cancer cells extracted from paraffin-embedded tissue for bivariate flow cytometric analysis. | Q54455036 | ||
| The three 'C' s of chromosome conformation capture: controls, controls, controls. | Q54625818 | ||
| When catastrophe strikes a cell | Q57304558 | ||
| Laser-capture microdissection | Q60673340 | ||
| Erratum: Corrigendum: Performance comparison of whole-genome sequencing platforms | Q62972128 | ||
| Fluorescence in situ hybridization analysis of single-cell trisomies for determination of clonality | Q74409073 | ||
| More to Hi-C than meets the eye | Q82221849 | ||
| Single-cell chromosomal imbalances detection by array CGH | Q83337530 | ||
| Exome sequencing of gastric adenocarcinoma identifies recurrent somatic mutations in cell adhesion and chromatin remodeling genes | Q83831946 | ||
| Cell Biology. Using cell-to-cell variability--a new era in molecular biology | Q84008791 | ||
| A high-resolution survey of deletion polymorphism in the human genome | Q94465012 | ||
| The transcriptional landscape of the yeast genome defined by RNA sequencing | Q24633693 | ||
| Sequencing technologies and genome sequencing | Q24635185 | ||
| Combinatorial patterns of histone acetylations and methylations in the human genome | Q24647290 | ||
| A second generation human haplotype map of over 3.1 million SNPs | Q24651939 | ||
| Genome-wide analysis in vivo of translation with nucleotide resolution using ribosome profiling | Q24651977 | ||
| Paired-end mapping reveals extensive structural variation in the human genome | Q24653260 | ||
| Noninvasive diagnosis of fetal aneuploidy by shotgun sequencing DNA from maternal blood | Q24657306 | ||
| Global variation in copy number in the human genome | Q24658083 | ||
| FAIRE (Formaldehyde-Assisted Isolation of Regulatory Elements) isolates active regulatory elements from human chromatin | Q24673476 | ||
| A public resource facilitating clinical use of genomes | Q27133763 | ||
| Global and unbiased detection of splice junctions from RNA-seq data | Q27499416 | ||
| Use of whole-genome sequencing to diagnose a cryptic fusion oncogene | Q27851641 | ||
| Sequencing technologies - the next generation | Q27860568 | ||
| The International HapMap Project | Q27860695 | ||
| High-resolution profiling of histone methylations in the human genome | Q27860906 | ||
| Nascent transcript sequencing visualizes transcription at nucleotide resolution | Q27930489 | ||
| Stochastic gene expression in a single cell | Q28131784 | ||
| Comprehensive mapping of long-range interactions reveals folding principles of the human genome | Q28131819 | ||
| Capturing chromosome conformation | Q28201750 | ||
| mRNA-Seq whole-transcriptome analysis of a single cell | Q28240611 | ||
| Laser capture microdissection technology | Q28250373 | ||
| Genome-wide mapping of HATs and HDACs reveals distinct functions in active and inactive genes | Q28255974 | ||
| Chromosome Conformation Capture Carbon Copy (5C): a massively parallel solution for mapping interactions between genomic elements | Q28262061 | ||
| Topological domains in mammalian genomes identified by analysis of chromatin interactions | Q28264221 | ||
| Whole-genome sequencing of liver cancers identifies etiological influences on mutation patterns and recurrent mutations in chromatin regulators | Q28267500 | ||
| Mapping human genetic diversity in Asia | Q28267585 | ||
| The clonal evolution of tumor cell populations | Q28271546 | ||
| Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst | Q28280404 | ||
| Stem cell transcriptome profiling via massive-scale mRNA sequencing | Q28282295 | ||
| The influence of CCL3L1 gene-containing segmental duplications on HIV-1/AIDS susceptibility | Q28301418 | ||
| Making a definitive diagnosis: successful clinical application of whole exome sequencing in a child with intractable inflammatory bowel disease | Q28301461 | ||
| Integrative analysis of the Caenorhabditis elegans genome by the modENCODE project | Q28301622 | ||
| Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters | Q28302903 | ||
| Nuclear organization of the genome and the potential for gene regulation | Q28303751 | ||
| CNVnator: an approach to discover, genotype, and characterize typical and atypical CNVs from family and population genome sequencing | Q28305453 | ||
| Tumour evolution inferred by single-cell sequencing | Q28646966 | ||
| Genetic variation in the gene encoding calpain-10 is associated with type 2 diabetes mellitus | Q28771769 | ||
| An oestrogen-receptor-α-bound human chromatin interactome | Q29541719 | ||
| Genome-wide mapping of in vivo protein-DNA interactions | Q29547162 | ||
| The cancer genome | Q29547643 | ||
| Genomic binding sites of the yeast cell-cycle transcription factors SBF and MBF | Q29547783 | ||
| The life history of 21 breast cancers | Q29614642 | ||
| Personal omics profiling reveals dynamic molecular and medical phenotypes | Q29614800 | ||
| Annotation of functional variation in personal genomes using RegulomeDB | Q29614867 | ||
| Stability and flexibility of epigenetic gene regulation in mammalian development | Q29615922 | ||
| Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation | Q29615949 | ||
| Identification of functional elements and regulatory circuits by Drosophila modENCODE | Q29617551 | ||
| Genomic maps of long noncoding RNA occupancy reveal principles of RNA-chromatin interactions | Q29617830 | ||
| Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing | Q29618021 | ||
| Molecular mechanisms of long noncoding RNAs | Q29618027 | ||
| Role for DNA methylation in genomic imprinting | Q29618669 | ||
| Causal protein-signaling networks derived from multiparameter single-cell data | Q29619136 | ||
| Whole-exome sequencing of human pancreatic cancers and characterization of genomic instability caused by MLH1 haploinsufficiency and complete deficiency | Q30465158 | ||
| Dynamic transcriptome analysis measures rates of mRNA synthesis and decay in yeast | Q30498341 | ||
| PET-Tool: a software suite for comprehensive processing and managing of Paired-End diTag (PET) sequence data | Q31057101 | ||
| CAGE: cap analysis of gene expression | Q33234345 | ||
| Intermingling of chromosome territories in interphase suggests role in translocations and transcription-dependent associations | Q33240304 | ||
| DNA methylation supports intrinsic epigenetic memory in mammalian cells | Q33242824 | ||
| Laser capture microdissection. | Q33244353 | ||
| Circular chromosome conformation capture (4C) uncovers extensive networks of epigenetically regulated intra- and interchromosomal interactions. | Q33260024 | ||
| Paired-end genomic signature tags: a method for the functional analysis of genomes and epigenomes. | Q33265849 | ||
| High resolution array-CGH analysis of single cells | Q33267061 | ||
| Paired-end diTagging for transcriptome and genome analysis | Q33319230 | ||
| Chromatin interaction analysis using paired-end tag sequencing. | Q33523549 | ||
| Tumor heterogeneity: causes and consequences | Q33624298 | ||
| Nucleotide Frequency Variation Across Human Genes | Q33683753 | ||
| Chromosome territories | Q33693822 | ||
| Performance comparison of whole-genome sequencing platforms | Q33824777 | ||
| Single cell analysis: the new frontier in 'omics'. | Q33875993 | ||
| DNA methylation and silencing of gene expression | Q33885395 | ||
| Identification of genomic indels and structural variations using split reads | Q33970542 | ||
| Chromatin architecture | Q33994172 | ||
| Stem cells at the dawn of the 21st century | Q34581992 | ||
| Deletion of the late cornified envelope LCE3B and LCE3C genes as a susceptibility factor for psoriasis | Q34603580 | ||
| Genetic testing for potentially lethal, highly treatable inherited cardiomyopathies/channelopathies in clinical practice | Q34627407 | ||
| Next-generation sequencing transforms today's biology | Q34731728 | ||
| Transcriptional consequences of genomic structural aberrations in breast cancer | Q34867822 | ||
| Identification of fusion genes in breast cancer by paired-end RNA-sequencing | Q34964405 | ||
| Next-generation DNA sequencing of paired-end tags (PET) for transcriptome and genome analyses | Q34973377 | ||
| Genome-wide identification of human RNA editing sites by parallel DNA capturing and sequencing | Q34983645 | ||
| Hereditary chronic lymphocytic leukemia: an extended family study and literature review | Q34984175 | ||
| Mapping accessible chromatin regions using Sono-Seq | Q34999369 | ||
| Transcriptome sequencing across a prostate cancer cohort identifies PCAT-1, an unannotated lincRNA implicated in disease progression | Q35154249 | ||
| Exome sequencing identifies GRIN2A as frequently mutated in melanoma | Q35179796 | ||
| Exome sequencing identifies a spectrum of mutation frequencies in advanced and lethal prostate cancers | Q35345680 | ||
| AlleleSeq: analysis of allele-specific expression and binding in a network framework | Q35526123 | ||
| Stem cells: review and update | Q35626633 | ||
| New insights into Acinetobacter baumannii pathogenesis revealed by high-density pyrosequencing and transposon mutagenesis | Q35677298 | ||
| Whole-genome sequencing for optimized patient management | Q35857612 | ||
| Spatial organization of the mouse genome and its role in recurrent chromosomal translocations | Q35874015 | ||
| CTCF-mediated functional chromatin interactome in pluripotent cells | Q36218315 | ||
| DNA methylation and gene silencing in cancer | Q36338042 | ||
| An encyclopedia of mouse DNA elements (Mouse ENCODE). | Q36377972 | ||
| High-resolution array comparative genomic hybridization of single micrometastatic tumor cells. | Q36633194 | ||
| Living with noisy genes: how cells function reliably with inherent variability in gene expression | Q36810344 | ||
| Where shall we meet? A role for genome organisation and nuclear sub-compartments in mediating interchromosomal interactions. | Q37126532 | ||
| Global mapping of protein-DNA interactions in vivo by digital genomic footprinting | Q37157318 | ||
| Germline allele-specific expression of TGFBR1 confers an increased risk of colorectal cancer | Q37168622 | ||
| Genomic sequencing of colorectal adenocarcinomas identifies a recurrent VTI1A-TCF7L2 fusion | Q37242449 | ||
| Deletion polymorphism upstream of IRGM associated with altered IRGM expression and Crohn's disease | Q37318174 | ||
| Digital RNA allelotyping reveals tissue-specific and allele-specific gene expression in human | Q37343820 | ||
| Circulating tumour cells, their role in metastasis and their clinical utility in lung cancer. | Q37972407 | ||
| Application of next generation sequencing to molecular diagnosis of inherited diseases | Q38009214 | ||
| ChIP-chip: a genomic approach for identifying transcription factor binding sites | Q38287979 | ||
| Defining transcribed regions using RNA-seq | Q38431799 | ||
| 9p21 DNA variants associated with coronary artery disease impair interferon-γ signalling response | Q39048288 | ||
| P275 | copyright license | Creative Commons Attribution-NonCommercial-ShareAlike 3.0 Unported | Q15643954 |
| P6216 | copyright status | copyrighted | Q50423863 |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | medical research | Q2752427 |
| biomedical investigative technique | Q66648976 | ||
| high-throughput sequencing | Q112147935 | ||
| P304 | page(s) | 640 | |
| P577 | publication date | 2013-01-01 | |
| P1433 | published in | Molecular Systems Biology | Q2261043 |
| P1476 | title | High-throughput sequencing for biology and medicine | |
| P478 | volume | 9 |
| Q31147908 | A Scalable Data Access Layer to Manage Structured Heterogeneous Biomedical Data |
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| Q64106456 | Aberrantly hydroxymethylated differentially expressed genes and the associated protein pathways in osteoarthritis |
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| Q61790283 | Angel: Towards a Multi-level Method for the Analysis of Variants in Individual Genomes |
| Q34294964 | Autoimmune and autoinflammatory mechanisms in uveitis |
| Q35685054 | Big Data: Astronomical or Genomical? |
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| Q30364639 | Combination of Sonodynamic and Photodynamic Therapy against Cancer Would Be Effective through Using a Regulated Size of Nanoparticles. |
| Q30580412 | Comparison of mapping algorithms used in high-throughput sequencing: application to Ion Torrent data. |
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| Q37072013 | Fibroblasts: the missing link between fibrotic lung diseases of different etiologies? |
| Q35066396 | Fluorescent probes for nucleic Acid visualization in fixed and live cells. |
| Q50637732 | Foetal radiography for suspected skeletal dysplasia: technique, normal appearances, diagnostic approach. |
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| Q28077604 | From integrative genomics to systems genetics in the rat to link genotypes to phenotypes |
| Q36386093 | Functional and Structural Consequence of Rare Exonic Single Nucleotide Polymorphisms: One Story, Two Tales |
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| Q33850638 | Glycoproteomic analysis of prostate cancer tissues by SWATH mass spectrometry discovers N-acylethanolamine acid amidase and protein tyrosine kinase 7 as signatures for tumor aggressiveness. |
| Q40133912 | Highly sensitive and ultrafast read mapping for RNA-seq analysis |
| Q42775500 | Identification of Brassinosteroid Target Genes by Chromatin Immunoprecipitation Followed by High-Throughput Sequencing (ChIP-seq) and RNA-Sequencing. |
| Q37689928 | Identifying driver mutations in sequenced cancer genomes: computational approaches to enable precision medicine |
| Q35590348 | Inferring epigenetic dynamics from kin correlations |
| Q31120979 | Integrative analysis of human omics data using biomolecular networks |
| Q27015460 | Investigating intratumour heterogeneity by single-cell sequencing |
| Q88979611 | Large Scale Proteomic Data and Network-Based Systems Biology Approaches to Explore the Plant World |
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| Q37114392 | Molecular and genetic inflammation networks in major human diseases. |
| Q28607220 | Molecular portraits: the evolution of the concept of transcriptome-based cancer signatures |
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| Q51744431 | Novel read density distribution score shows possible aligner artefacts, when mapping a single chromosome. |
| Q46904508 | Opening the genetic toolbox of niche model organisms with high throughput techniques: novel proteins in regeneration as a case study |
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| Q35181087 | PVT: an efficient computational procedure to speed up next-generation sequence analysis. |
| Q90396592 | Particle-Templated Emulsification for Microfluidics-Free Digital Biology |
| Q38810911 | Precision medicine in pediatric oncology: Lessons learned and next steps |
| Q91857984 | Primary transcripts: From the discovery of RNA processing to current concepts of gene expression - Review |
| Q34289909 | Profiling human protein degradome delineates cellular responses to proteasomal inhibition and reveals a feedback mechanism in regulating proteasome homeostasis |
| Q38097377 | Quantitative microfluidic biomolecular analysis for systems biology and medicine |
| Q35014723 | RNA-Seq reveals differential gene expression in Staphylococcus aureus with single-nucleotide resolution |
| Q36241793 | Rapidly discriminate commercial medicinal Pulsatilla chinensis (Bge.) Regel from its adulterants using ITS2 barcoding and specific PCR-RFLP assay |
| Q43164101 | Reading and writing omes |
| Q36904950 | Real-time single-molecule electronic DNA sequencing by synthesis using polymer-tagged nucleotides on a nanopore array |
| Q47343155 | SOAPnuke: A MapReduce Acceleration supported Software for integrated Quality Control and Preprocessing of High-Throughput Sequencing Data |
| Q28818540 | Scalable Parameter Estimation for Genome-Scale Biochemical Reaction Networks |
| Q33595904 | Sequence analysis by iterated maps, a review |
| Q34102954 | Single Cell Analysis: From Technology to Biology and Medicine |
| Q26767451 | Single-cell transcriptome sequencing: recent advances and remaining challenges |
| Q37584747 | Systems approaches to human autoimmune diseases |
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| Q35818259 | Teaser: Individualized benchmarking and optimization of read mapping results for NGS data. |
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