| scholarly article | Q13442814 |
| P50 | author | Abram Aertsen | Q41340625 |
| Chris W Michiels | Q41340632 | ||
| P2093 | author name string | Kai Zhou | |
| P2860 | cites work | The complete genome sequence of the avian pathogen Mycoplasma gallisepticum strain Rlow | Q22065907 |
| Phase and antigenic variation in bacteria | Q24561666 | ||
| Helicobacter pylori SabA adhesin in persistent infection and chronic inflammation | Q24650188 | ||
| Comparative genomics and molecular dynamics of DNA repeats in eukaryotes | Q24650948 | ||
| Pathogenesis of Helicobacter pylori infection | Q24679810 | ||
| The Neisseria meningitidis capsule is important for intracellular survival in human cells | Q24684877 | ||
| Diversity in coding tandem repeats in related Neisseria spp | Q24801548 | ||
| Advances in mechanisms of genetic instability related to hereditary neurological diseases | Q24816457 | ||
| DNA sequences shaped by selection for stability | Q25255444 | ||
| Structural Basis for Sequence-Specific Recognition of DNA by TAL Effectors | Q27676611 | ||
| Tandem repeats finder: a program to analyze DNA sequences | Q27860863 | ||
| Xanthomonas AvrBs3 family-type III effectors: discovery and function | Q28243062 | ||
| A simple cipher governs DNA recognition by TAL effectors | Q28265506 | ||
| Breaking the code of DNA binding specificity of TAL-type III effectors | Q28265515 | ||
| Mutation rate in human microsatellites: influence of the structure and length of the tandem repeat | Q28270676 | ||
| TAL effectors are remote controls for gene activation | Q30318498 | ||
| A bacterial effector acts as a plant transcription factor and induces a cell size regulator | Q30319733 | ||
| Analysis of distribution indicates diverse functions of simple sequence repeats in Mycoplasma genomes. | Q30353931 | ||
| The Vlp system of Mycoplasma hyorhinis: combinatorial expression of distinct size variant lipoproteins generating high-frequency surface antigenic variation. | Q30370050 | ||
| Evolutionary pressures on simple sequence repeats in prokaryotic coding regions | Q30410058 | ||
| Cell death upon epigenetic genome methylation: a novel function of methyl-specific deoxyribonucleases | Q30485348 | ||
| Characterization of a CACAG pentanucleotide repeat in Pasteurella haemolytica and its possible role in modulation of a novel type III restriction-modification system | Q30642496 | ||
| Detecting short tandem repeats from genome data: opening the software black box. | Q31162390 | ||
| The mutation rates of di-, tri- and tetranucleotide repeats in Drosophila melanogaster | Q31946072 | ||
| Variable tandem repeats accelerate evolution of coding and regulatory sequences. | Q37784520 | ||
| Opa proteins and CEACAMs: pathways of immune engagement for pathogenic Neisseria | Q37825922 | ||
| Bacterial hypermutation: clinical implications | Q37847007 | ||
| TAL effectors: customizable proteins for DNA targeting | Q37940951 | ||
| Genotyping of selected bacterial enteropathogens in Norway. | Q37942721 | ||
| Stress-induced modulators of repeat instability and genome evolution | Q37976153 | ||
| Review of tandem repeat search tools: a systematic approach to evaluating algorithmic performance | Q38014793 | ||
| Unstable microsatellite repeats facilitate rapid evolution of coding and regulatory sequences. | Q38023676 | ||
| Tell me a tale of TALEs | Q38056853 | ||
| Mutations arising during repair of chromosome breaks | Q38059260 | ||
| TAL effectors: function, structure, engineering and applications | Q38069694 | ||
| Opacity-associated adhesin repertoire in hyperinvasive Neisseria meningitidis | Q38481856 | ||
| Variation in expression of the Haemophilus influenzae HMW adhesins: a prokaryotic system reminiscent of eukaryotes. | Q38499297 | ||
| The identification and characterization of microsatellites in the compact genome of the Japanese pufferfish, Fugu rubripes: perspectives in functional and comparative genomic analyses. | Q38551650 | ||
| A conserved tetranucleotide repeat is necessary for wild-type expression of the Moraxella catarrhalis UspA2 protein | Q39112669 | ||
| Localized reversible frameshift mutation in the flhA gene confers phase variability to flagellin gene expression in Campylobacter coli | Q39498416 | ||
| The UspA1 protein and a second type of UspA2 protein mediate adherence of Moraxella catarrhalis to human epithelial cells in vitro | Q39499324 | ||
| Expression of the Moraxella catarrhalis UspA1 protein undergoes phase variation and is regulated at the transcriptional level | Q39502700 | ||
| Multiple mechanisms of phase variation of PorA in Neisseria meningitidis | Q39517149 | ||
| pMGA phenotypic variation in Mycoplasma gallisepticum occurs in vivo and is mediated by trinucleotide repeat length variation | Q39536960 | ||
| Over-representation of repeats in stress response genes: a strategy to increase versatility under stressful conditions? | Q39600777 | ||
| Characterization of a Listeria monocytogenes Scott A isolate with high tolerance towards high hydrostatic pressure | Q39650228 | ||
| A replicational model for DNA recombination between direct repeats. | Q54591975 | ||
| The role of fimV and the importance of its tandem repeat copy number in twitching motility, pigment production, and morphology in Legionella pneumophila | Q57766495 | ||
| Double-strand break repair can lead to high frequencies of deletions within short CAG/CTG trinucleotide repeats | Q58323745 | ||
| Microsatellite instability induced by hydrogen peroxide in Escherichia coli | Q58493764 | ||
| Race-specificity of plant resistance to bacterial spot disease determined by repetitive motifs in a bacterial avirulence protein | Q59077303 | ||
| Every microsatellite is different: Intrinsic DNA features dictate mutagenesis of common microsatellites present in the human genome | Q37420612 | ||
| Meningococcal interactions with the host | Q37501041 | ||
| TolA: a membrane protein involved in colicin uptake contains an extended helical region | Q37544989 | ||
| The type III effectors of Xanthomonas | Q37619685 | ||
| Multilocus variable-number tandem repeat analysis as a molecular tool for subtyping and phylogenetic analysis of bacterial pathogens | Q37661453 | ||
| The effect of immune selection on the structure of the meningococcal opa protein repertoire | Q33325914 | ||
| Lipopolysaccharide diversity evolving in Helicobacter pylori communities through genetic modifications in fucosyltransferases | Q33388233 | ||
| Phasevarions mediate random switching of gene expression in pathogenic Neisseria | Q33434451 | ||
| A novel phase variation mechanism in the meningococcus driven by a ligand-responsive repressor and differential spacing of distal promoter elements | Q33521253 | ||
| Multiple genetic switches spontaneously modulating bacterial mutability | Q33690962 | ||
| Chance favors the prepared genome | Q33692244 | ||
| Standing genetic variation in contingency loci drives the rapid adaptation of Campylobacter jejuni to a novel host | Q33808990 | ||
| Microsatellite instability regulates transcription factor binding and gene expression | Q33928490 | ||
| Escherichia coli K1 polysialic acid O-acetyltransferase gene, neuO, and the mechanism of capsule form variation involving a mobile contingency locus | Q33935770 | ||
| The phasevarion: a genetic system controlling coordinated, random switching of expression of multiple genes | Q33936713 | ||
| GAA trinucleotide repeat region regulates M9/pMGA gene expression in Mycoplasma gallisepticum. | Q34003345 | ||
| The phasevarion: phase variation of type III DNA methyltransferases controls coordinated switching in multiple genes | Q34097495 | ||
| Phasevarion mediated epigenetic gene regulation in Helicobacter pylori | Q34097569 | ||
| What Is a Microsatellite: A Computational and Experimental Definition Based upon Repeat Mutational Behavior at A/T and GT/AC Repeats | Q34131685 | ||
| Regulation of selected genome loci using de novo-engineered transcription activator-like effector (TALE)-type transcription factors | Q34151740 | ||
| Short sequence repeats in microbial pathogenesis and evolution | Q34158598 | ||
| The simple sequence contingency loci of Haemophilus influenzae and Neisseria meningitidis | Q34187179 | ||
| Mini- and microsatellite expansions: the recombination connection | Q34193900 | ||
| Frameshift mutations and the genetic code. This paper is dedicated to Professor Theodosius Dobzhansky on the occasion of his 66th birthday | Q34229913 | ||
| Contingency locus in ctsR of Listeria monocytogenes Scott A: a strategy for occurrence of abundant piezotolerant isolates within clonal populations | Q34232549 | ||
| Transcriptional phase variation of a type III restriction-modification system in Helicobacter pylori | Q34320449 | ||
| Phase variation of H. influenzae fimbriae: transcriptional control of two divergent genes through a variable combined promoter region. | Q34366696 | ||
| ENZYMATIC SYNTHESIS OF DEOXYRIBONUCLEIC ACID, XVI. OLIGONUCLEOTIDES AS TEMPLATES AND THE MECHANISM OF THEIR REPLICATION | Q34399349 | ||
| Helicobacter pylori adhesin binding fucosylated histo-blood group antigens revealed by retagging | Q34452414 | ||
| Variation of intragenic tandem repeat tract of tolA modulates Escherichia coli stress tolerance | Q34456512 | ||
| An enzymatic ruler modulates Lewis antigen glycosylation of Helicobacter pylori LPS during persistent infection | Q34479753 | ||
| Adhesive activity of the haemophilus cryptic genospecies cha autotransporter is modulated by variation in tandem Peptide repeats | Q34484236 | ||
| Mutation and evolution of microsatellite loci in Neurospora | Q34569677 | ||
| Timescales of genetic and epigenetic inheritance | Q34576261 | ||
| Attachment and invasion of Neisseria meningitidis to host cells is related to surface hydrophobicity, bacterial cell size and capsule | Q34584506 | ||
| Simple sequence repeats in Haemophilus influenzae | Q34602204 | ||
| Heterogeneity in tandem octanucleotides within Haemophilus influenzae lipopolysaccharide biosynthetic gene losA affects serum resistance | Q34680964 | ||
| Determinants of phase variation rate and the fitness implications of differing rates for bacterial pathogens and commensals. | Q34946866 | ||
| Genesis, effects and fates of repeats in prokaryotic genomes. | Q34977985 | ||
| Environmental regulation of mutation rates at specific sites. | Q35058954 | ||
| Complex minisatellite rearrangements generated in the total or partial absence of Rad27/hFEN1 activity occur in a single generation and are Rad51 and Rad52 dependent. | Q35071154 | ||
| A contingency locus in prfA in a Listeria monocytogenes subgroup allows reactivation of the PrfA virulence regulator during infection in mice | Q35077378 | ||
| Evidence for an evolutionary antagonism between Mrr and Type III modification systems | Q35153520 | ||
| Complex role of hemoglobin and hemoglobin-haptoglobin binding proteins in Haemophilus influenzae virulence in the infant rat model of invasive infection. | Q35217539 | ||
| Deletion of one nucleotide within the homonucleotide tract present in the hsdS gene alters the DNA sequence specificity of type I restriction-modification system NgoAV | Q35598777 | ||
| Localized frameshift mutation generates selective, high-frequency phase variation of a surface lipoprotein encoded by a mycoplasma ABC transporter operon | Q35624813 | ||
| Molecular mechanisms of gastric epithelial cell adhesion and injection of CagA by Helicobacter pylori | Q35695210 | ||
| Origins of variation in the fungal cell surface | Q35805382 | ||
| Detecting microsatellites within genomes: significant variation among algorithms | Q35808034 | ||
| Simple sequence repeats in prokaryotic genomes | Q35850225 | ||
| Influence of the combination and phase variation status of the haemoglobin receptors HmbR and HpuAB on meningococcal virulence. | Q35959773 | ||
| Stress responses and genetic variation in bacteria. | Q35986593 | ||
| Stress and how bacteria cope with death and survival. | Q36007272 | ||
| Multiple-locus variable number tandem repeats analysis for genetic fingerprinting of pathogenic bacteria. | Q36153028 | ||
| Diversify or die: generation of diversity in response to stress. | Q36178618 | ||
| Repeat instability: mechanisms of dynamic mutations | Q36277189 | ||
| Type III effector proteins from the plant pathogen Xanthomonas and their role in the interaction with the host plant | Q36357133 | ||
| Variation of gonococcal lipooligosaccharide structure is due to alterations in poly-G tracts in lgt genes encoding glycosyl transferases | Q36366145 | ||
| Repeat or not repeat?--Statistical validation of tandem repeat prediction in genomic sequences | Q36368731 | ||
| Environmental tuning of mutation rates | Q36372535 | ||
| Genetic basis for the structural difference between Streptococcus pneumoniae serotype 15B and 15C capsular polysaccharides. | Q36375241 | ||
| Mechanisms of tandem repeat instability in bacteria. | Q36414943 | ||
| Mobile contingency locus controlling Escherichia coli K1 polysialic acid capsule acetylation | Q36469409 | ||
| Spontaneously Arising mutL Mutators in Evolving Escherichia coli Populations Are the Result of Changes in Repeat Length | Q36474342 | ||
| Broad conditions favor the evolution of phase-variable loci. | Q36537965 | ||
| Bacterial contingency loci: the role of simple sequence DNA repeats in bacterial adaptation | Q36649037 | ||
| Expression and structural diversity of the lipopolysaccharide of Haemophilus influenzae: implication in virulence | Q36798837 | ||
| Phase variable type III restriction-modification systems of host-adapted bacterial pathogens | Q36917132 | ||
| Neisseria gonorrhoeae PilC expression provides a selective mechanism for structural diversity of pili | Q36943345 | ||
| Stress-induced mutagenesis in bacteria. | Q36961683 | ||
| Instability of repetitive DNA sequences: the role of replication in multiple mechanisms | Q37096065 | ||
| Expression of the Helicobacter pylori adhesin SabA is controlled via phase variation and the ArsRS signal transduction system | Q37274259 | ||
| DNA repeats identify novel virulence genes in Haemophilus influenzae | Q37312114 | ||
| A Legionella pneumophila collagen-like protein encoded by a gene with a variable number of tandem repeats is involved in the adherence and invasion of host cells | Q39718517 | ||
| Phenotypic switching of variable surface lipoproteins in Mycoplasma bovis involves high-frequency chromosomal rearrangements | Q39842712 | ||
| Microsatellite variation in North American populations of Drosophila melanogaster | Q40396094 | ||
| Effects of environmental stress on stability of tandem repeats in Escherichia coli O157:H7. | Q40526885 | ||
| Adaptive evolution of highly mutable loci in pathogenic bacteria | Q40629814 | ||
| Sequence-based estimation of minisatellite and microsatellite repeat variability | Q40815198 | ||
| An appraisal of the potential for illegitimate recombination in bacterial genomes and its consequences: from duplications to genome reduction | Q40829765 | ||
| Prevalence of the hifBC, hmw1A, hmw2A, hmwC, and hia Genes in Haemophilus influenzae Isolates | Q41040229 | ||
| Tandem repeats in proteins: from sequence to structure | Q41615004 | ||
| Effect of repeat copy number on variable-number tandem repeat mutations in Escherichia coli O157:H7. | Q41669840 | ||
| Phase variable genes of Campylobacter jejuni exhibit high mutation rates and specific mutational patterns but mutability is not the major determinant of population structure during host colonization | Q41859611 | ||
| Proofreading and secondary structure processing determine the orientation dependence of CAG x CTG trinucleotide repeat instability in Escherichia coli | Q41982548 | ||
| Escherichia coli K1-specific bacteriophage CUS-3 distribution and function in phase-variable capsular polysialic acid O acetylation | Q42412414 | ||
| Simple sequence repeats and genome plasticity in Streptococcus agalactiae | Q42576675 | ||
| Molecular genetic basis for the variable expression of Lewis Y antigen in Helicobacter pylori: analysis of the alpha (1,2) fucosyltransferase gene | Q42595843 | ||
| Identification of the functional initiation codons of a phase-variable gene of Haemophilus influenzae, lic2A, with the potential for differential expression | Q42603240 | ||
| Identification and characterization of simple sequence repeats in the genomes of Shigella species. | Q42614235 | ||
| The length of a tetranucleotide repeat tract in Haemophilus influenzae determines the phase variation rate of a gene with homology to type III DNA methyltransferases. | Q42617085 | ||
| O-acetyltransferase gene neuO is segregated according to phylogenetic background and contributes to environmental desiccation resistance in Escherichia coli K1. | Q42630364 | ||
| Mechanism of antigenic variation in Mycoplasma pulmonis: interwoven, site-specific DNA inversions | Q42638983 | ||
| Unique regulation of SclB - a novel collagen-like surface protein of Streptococcus pyogenes | Q42653998 | ||
| Analysis of type I restriction modification systems in the Neisseriaceae: genetic organization and properties of the gene products | Q42659475 | ||
| Localized reversible frameshift mutation in an adhesin gene confers a phase-variable adherence phenotype in mycoplasma | Q42667150 | ||
| Spontaneous sequence duplication within an open reading frame of the pneumococcal type 3 capsule locus causes high-frequency phase variation | Q42671880 | ||
| Serial isolates of persistent Haemophilus influenzae in patients with chronic obstructive pulmonary disease express diminishing quantities of the HMW1 and HMW2 adhesins | Q42754558 | ||
| Neisseria meningitidis escape from the bactericidal activity of a monoclonal antibody is mediated by phase variation of lgtG and enhanced by a mutator phenotype | Q42765433 | ||
| More than one tandem repeat domain of the extracellular adherence protein of Staphylococcus aureus is required for aggregation, adherence, and host cell invasion but not for leukocyte activation | Q43242642 | ||
| Conversion of a peroxiredoxin into a disulfide reductase by a triplet repeat expansion | Q43757520 | ||
| Role of a short tandem leucine/arginine repeat in strong mutator phenotype acquisition in a clinical isolate of Salmonella Typhimurium | Q44034811 | ||
| Spontaneous sequence duplications within capsule genes cap8E and tts control phase variation in Streptococcus pneumoniae serotypes 8 and 37. | Q44353953 | ||
| A novel epigenetic regulator associated with the hypervirulent Neisseria meningitidis clonal complex 41/44. | Q44462970 | ||
| The CtsR regulator of Listeria monocytogenes contains a variant glycine repeat region that affects piezotolerance, stress resistance, motility and virulence. | Q44563368 | ||
| The role of lex2 in lipopolysaccharide biosynthesis in Haemophilus influenzae strains RM7004 and RM153. | Q44643963 | ||
| Phase variation of gonococcal protein II: regulation of gene expression by slipped-strand mispairing of a repetitive DNA sequence. | Q44667019 | ||
| Distribution and evolution of short tandem repeats in closely related bacterial genomes | Q45016243 | ||
| Variable expression of the Opc outer membrane protein in Neisseria meningitidis is caused by size variation of a promoter containing poly-cytidine | Q47372926 | ||
| The relationship between microsatellite slippage mutation rate and the number of repeat units | Q47654412 | ||
| Phase variation of HpuAB and HmbR, two distinct haemoglobin receptors of Neisseria meningitidis DNM2. | Q47957751 | ||
| Characterization of hgpA, a gene encoding a haemoglobin/haemoglobin-haptoglobin-binding protein of Haemophilus influenzae. | Q47969244 | ||
| Variability of the tandem repeat region of the Escherichia coli tolA gene | Q48049199 | ||
| Biochemical characterization of the polysialic acid-specific O-acetyltransferase NeuO of Escherichia coli K1. | Q48079290 | ||
| Cholera toxin transcriptional activator toxR is a transmembrane DNA binding protein | Q48350458 | ||
| IMEx: Imperfect Microsatellite Extractor. | Q48408506 | ||
| Characterization of mononucleotide repeats in sequenced prokaryotic genomes | Q49168816 | ||
| Novel lipopolysaccharide biosynthetic genes containing tetranucleotide repeats in Haemophilus influenzae, identification of a gene for adding O-acetyl groups | Q50087059 | ||
| Comparative and functional characterization of intragenic tandem repeats in 10 Aspergillus genomes. | Q51945359 | ||
| Selection on the genic location of disruptive elements. | Q53029909 | ||
| Asymmetry of frameshift mutagenesis during leading and lagging-strand replication in Escherichia coli. | Q53768726 | ||
| Low abundance of Escherichia coli microsatellites is associated with an extremely low mutation rate. | Q54457668 | ||
| Roles of double-strand breaks, nicks, and gaps in stimulating deletions of CTG.CAG repeats by intramolecular DNA repair. | Q54477633 | ||
| P433 | issue | 1 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | tandem repeat | Q3456514 |
| P304 | page(s) | 119-141 | |
| P577 | publication date | 2013-08-28 | |
| P1433 | published in | FEMS Microbiology Reviews | Q15762226 |
| P1476 | title | The role of variable DNA tandem repeats in bacterial adaptation | |
| P478 | volume | 38 |
| Q35200615 | A repetitive DNA element regulates expression of the Helicobacter pylori sialic acid binding adhesin by a rheostat-like mechanism |
| Q52648650 | A survey of Type III restriction-modification systems reveals numerous, novel epigenetic regulators controlling phase-variable regulons; phasevarions. |
| Q34400711 | A variable homopolymeric G-repeat defines small RNA-mediated posttranscriptional regulation of a chemotaxis receptor in Helicobacter pylori |
| Q36373990 | Abundant Intergenic TAACTGA Direct Repeats and Putative Alternate RNA Polymerase β' Subunits in Marine Beggiatoaceae Genomes: Possible Regulatory Roles and Origins. |
| Q92762319 | Big on Change, Small on Innovation: Evolutionary Consequences of RNA Sequence Duplication |
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| Q57272329 | Biological Roles of Protein-Coding Tandem Repeats in the Yeast |
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| Q64994296 | Computational Characterization of the mtORF of Pocilloporid Corals: Insights into Protein Structure and Function in Stylophora Lineages from Contrasting Environments. |
| Q90318641 | De novo assembly of bacterial genomes with repetitive DNA regions by dnaasm application |
| Q53694421 | Effects of antibiotic resistance (AR) and microbiota shifts on Campylobacter jejuni-mediated diseases. |
| Q40325933 | Enrichment, Amplification, and Sequence-Based Typing of Salmonella enterica and Other Foodborne Pathogens |
| Q61798381 | Estimation of duplication history under a stochastic model for tandem repeats |
| Q57285692 | Fast and global detection of periodic sequence repeats in large genomic resources |
| Q91936096 | Genetic Variability Based on Tandem Repeat Numbers in a Genomic Locus of 'Candidatus Liberibacter asiaticus' Prevalent in North East India |
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| Q33853467 | Highly mutable tandem DNA repeats generate a cell wall protein variant more frequent in disease-causing Candida albicans isolates than in commensal isolates |
| Q36131588 | Identification and characterization of a minisatellite contained within a novel miniature inverted-repeat transposable element (MITE) of Porphyromonas gingivalis |
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| Q31136106 | Inter- and intra-strain variability of tandem repeats in Mycoplasma pneumoniae based on next-generation sequencing data |
| Q36337642 | Intrastrand triplex DNA repeats in bacteria: a source of genomic instability. |
| Q35875784 | Investigation of a Quadruplex-Forming Repeat Sequence Highly Enriched in Xanthomonas and Nostoc sp. |
| Q55317108 | MLVA typing of Haemophilus influenzae isolated from two Iranian university hospitals. |
| Q52657288 | Molecular typing of Mycobacterium kansasii using pulsed-field gel electrophoresis and a newly designed variable-number tandem repeat analysis. |
| Q92652944 | Morphological and Molecular Characterization of a New Mycobacterium avium Subsp. paratuberculosis S-Type Strain Genotype in Goats |
| Q41148855 | Morphology heterogeneity within a Campylobacter jejuni helical population: the use of calcofluor white to generate rod-shaped C. jejuni 81-176 clones and the genetic determinants responsible for differences in morphology within 11168 strains |
| Q36271931 | Not all predicted CRISPR-Cas systems are equal: isolated cas genes and classes of CRISPR like elements. |
| Q36033110 | Origin of the Outbreak in France of Pseudomonas syringae pv. actinidiae Biovar 3, the Causal Agent of Bacterial Canker of Kiwifruit, Revealed by a Multilocus Variable-Number Tandem-Repeat Analysis |
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| Q42172899 | Phase and antigenic variation govern competition dynamics through positioning in bacterial colonies. |
| Q57293298 | Polymorphism of Polymeric Amino Acid Regions in Fungal Proteins and Correlation with Altered Echinocandin and Azole Susceptibility. |
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