| scholarly article | Q13442814 |
| P50 | author | Matthias Buck | Q41692605 |
| Yufeng Tong | Q43127061 | ||
| Prasanta K Hota | Q58881640 | ||
| Wolfram Tempel | Q28316856 | ||
| P2093 | author name string | Hee-Won Park | |
| Mei Li | |||
| Limin Shen | |||
| Preeti Chugha | |||
| Rebecca S Alviani | |||
| P2860 | cites work | Plexins are a large family of receptors for transmembrane, secreted, and GPI-anchored semaphorins in vertebrates | Q22010646 |
| Rho GTPases have diverse effects on the organization of the actin filament system | Q24296619 | ||
| Direct interaction of Rnd1 with Plexin-B1 regulates PDZ-RhoGEF-mediated Rho activation by Plexin-B1 and induces cell contraction in COS-7 cells | Q24301058 | ||
| Semaphorins command cells to move | Q36325591 | ||
| Semaphorin3A enhances endocytosis at sites of receptor-F-actin colocalization during growth cone collapse. | Q36328339 | ||
| 1H, 15N and 13C Resonance assignments and secondary structure determination reveal that the minimal Rac1 GTPase binding domain of plexin-B1 has a ubiquitin fold | Q37434673 | ||
| CIITA-regulated plexin-A1 affects T-cell-dendritic cell interactions. | Q38351580 | ||
| Semaphorin-plexin signaling guides patterning of the developing vasculature. | Q40538400 | ||
| 1H, 15N, 13C assignments for the activated form of the small Rho-GTPase Rac1. | Q41884961 | ||
| Plexin-B semaphorin receptors interact directly with active Rac and regulate the actin cytoskeleton by activating Rho. | Q42830840 | ||
| A genetic algorithm for the identification of conformationally invariant regions in protein molecules | Q43864079 | ||
| Class IV semaphorins promote angiogenesis by stimulating Rho-initiated pathways through plexin-B. | Q45003993 | ||
| Plexin B mediates axon guidance in Drosophila by simultaneously inhibiting active Rac and enhancing RhoA signaling | Q46106917 | ||
| A two-state allosteric model for autoinhibition rationalizes WASP signal integration and targeting | Q47812621 | ||
| Small GTPase RhoD suppresses cell migration and cytokinesis. | Q47967575 | ||
| A novel NMR method for determining the interfaces of large protein-protein complexes | Q73505125 | ||
| Molecular dissection of the semaphorin 4D receptor plexin-B1-stimulated R-Ras GTPase-activating protein activity and neurite remodeling in hippocampal neurons | Q81152629 | ||
| A conserved binding motif defines numerous candidate target proteins for both Cdc42 and Rac GTPases | Q24304128 | ||
| Dual roles of Sema6D in cardiac morphogenesis through region-specific association of its receptor, Plexin-A1, with off-track and vascular endothelial growth factor receptor type 2 | Q24607154 | ||
| The plexin-B1/Rac interaction inhibits PAK activation and enhances Sema4D ligand binding | Q24675149 | ||
| Plexin-B1/RhoGEF-mediated RhoA activation involves the receptor tyrosine kinase ErbB-2 | Q24676439 | ||
| The semaphorin receptor plexin-B1 specifically interacts with active Rac in a ligand-dependent manner | Q24680544 | ||
| Structure of the semaphorin-3A receptor binding module | Q27641852 | ||
| The ligand-binding face of the semaphorins revealed by the high-resolution crystal structure of SEMA4D | Q27641965 | ||
| SOLVE and RESOLVE: automated structure solution and density modification | Q27860481 | ||
| Coot: model-building tools for molecular graphics | Q27860505 | ||
| Structure validation by Calpha geometry: phi,psi and Cbeta deviation | Q27860657 | ||
| MOLPROBITY: structure validation and all-atom contact analysis for nucleic acids and their complexes | Q27860865 | ||
| DaliLite workbench for protein structure comparison | Q27860897 | ||
| Refinement of macromolecular structures by the maximum-likelihood method | Q27861011 | ||
| Rnd proteins function as RhoA antagonists by activating p190 RhoGAP | Q28184673 | ||
| Class 3 semaphorins control vascular morphogenesis by inhibiting integrin function | Q28189338 | ||
| Plexin-B1 directly interacts with PDZ-RhoGEF/LARG to regulate RhoA and growth cone morphology | Q28215013 | ||
| The semaphorin 4D receptor controls invasive growth by coupling with Met | Q28219215 | ||
| Rho GTPases and actin dynamics in membrane protrusions and vesicle trafficking | Q28261534 | ||
| The activity of the plexin-A1 receptor is regulated by Rac | Q28265990 | ||
| PlexinD1 and semaphorin signaling are required in endothelial cells for cardiovascular development | Q28270667 | ||
| The Semaphorin 4D receptor Plexin-B1 is a GTPase activating protein for R-Ras | Q28275924 | ||
| Rho GTPases control polarity, protrusion, and adhesion during cell movement | Q29614244 | ||
| Utilization of site-directed spin labeling and high-resolution heteronuclear nuclear magnetic resonance for global fold determination of large proteins with limited nuclear overhauser effect data | Q29617299 | ||
| Resolution of phase ambiguity in macromolecular crystallography | Q29617474 | ||
| When monomers are preferred: a strategy for the identification and disruption of weakly oligomerized proteins | Q30349959 | ||
| NMR techniques for identifying the interface of a larger protein-protein complex: cross-saturation and transferred cross-saturation experiments | Q30986395 | ||
| Plexins, semaphorins, and scatter factor receptors: a common root for cell guidance signals? | Q33819069 | ||
| The semaphorin 3A receptor may directly regulate the activity of small GTPases. | Q33927427 | ||
| Plexina1 autoinhibition by the plexin sema domain. | Q33937108 | ||
| Dual function of rhoD in vesicular movement and cell motility | Q34085798 | ||
| Antagonistic effects of Rnd1 and RhoD GTPases regulate receptor activity in Semaphorin 3A-induced cytoskeletal collapse. | Q34108858 | ||
| Plexins: axon guidance and signal transduction. | Q34409838 | ||
| Axon guidance: the cytoplasmic tail | Q34560919 | ||
| P433 | issue | 51 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | cell biology | Q7141 |
| P304 | page(s) | 37215-24 | |
| P577 | publication date | 2007-12-21 | |
| P1433 | published in | Journal of Biological Chemistry | Q867727 |
| P1476 | title | Binding of Rac1, Rnd1, and RhoD to a Novel Rho GTPase Interaction Motif Destabilizes Dimerization of the Plexin-B1 Effector Domain | |
| P478 | volume | 282 |
| Q33883411 | A Collaborative Filtering Approach for Protein-Protein Docking Scoring Functions |
| Q27673776 | A Dual Binding Mode for RhoGTPases in Plexin Signalling |
| Q34856542 | A cytosolic juxtamembrane interface modulates plexin A3 oligomerization and signal transduction |
| Q34188720 | A generalized approach to sampling backbone conformations with RosettaDock for CAPRI rounds 13-19 |
| Q43041951 | Analysis of 15N-1H NMR relaxation in proteins by a combined experimental and molecular dynamics simulation approach: picosecond-nanosecond dynamics of the Rho GTPase binding domain of plexin-B1 in the dimeric state indicates allosteric pathways |
| Q42656756 | Analysis of the interaction of Plexin-B1 and Plexin-B2 with Rnd family proteins |
| Q39614422 | Backbone assignment and secondary structure of Rnd1, an unusual Rho family small GTPase |
| Q37475318 | Binding the atypical RA domain of Ste50p to the unfolded Opy2p cytoplasmic tail is essential for the high-osmolarity glycerol pathway. |
| Q47584313 | Blind predictions of protein interfaces by docking calculations in CAPRI |
| Q51359776 | Characterizing Plexin GTPase Interactions Using Gel Filtration, Surface Plasmon Resonance Spectrometry, and Isothermal Titration Calorimetry. |
| Q36275350 | Class A Plexins Are Organized as Preformed Inactive Dimers on the Cell Surface |
| Q42159319 | Combining NMR and molecular dynamics studies for insights into the allostery of small GTPase-protein interactions |
| Q37154008 | Compensatory and long-range changes in picosecond-nanosecond main-chain dynamics upon complex formation: 15N relaxation analysis of the free and bound states of the ubiquitin-like domain of human plexin-B1 and the small GTPase Rac1. |
| Q45363098 | Conservation, expression, and knockdown of zebrafish plxnb2a and plxnb2b |
| Q42723117 | Coordination of Rho and Rac GTPase function via p190B RhoGAP. |
| Q27657229 | Crystal structure of the plexin A3 intracellular region reveals an autoinhibited conformation through active site sequestration |
| Q42174264 | Different requirement for Rnd GTPases of R-Ras GAP activity of Plexin-C1 and Plexin-D1. |
| Q34361068 | Diverse functions for the semaphorin receptor PlexinD1 in development and disease. |
| Q47584586 | Docking and scoring protein interactions: CAPRI 2009 |
| Q43869772 | Drosophila GTPase nucleostemin 2 changes cellular distribution during larval development and the GTP-binding motif is essential to nucleoplasmic localization |
| Q24306887 | Effect of cancer-associated mutations in the PlexinB1 gene |
| Q43088887 | Function of mutant and wild‐type plexinB1 in prostate cancer cells |
| Q83232235 | Functional divergence of Plexin B structural motifs in distinct steps of olfactory circuit assembly |
| Q30010133 | Grb2 mediates semaphorin-4D-dependent RhoA inactivation |
| Q27649860 | Insights into Oncogenic Mutations of Plexin-B1 Based on the Solution Structure of the Rho GTPase Binding Domain |
| Q46858331 | Interaction characteristics of Plexin-B1 with Rho family proteins |
| Q27310828 | Modeling transmembrane domain dimers/trimers of plexin receptors: implications for mechanisms of signal transmission across the membrane |
| Q39012149 | Molecular Dynamics Simulations Reveal Isoform Specific Contact Dynamics between the Plexin Rho GTPase Binding Domain (RBD) and Small Rho GTPases Rac1 and Rnd1. |
| Q48193128 | Novel modulation factor quantifies the role of water molecules in protein interactions |
| Q42125679 | Optimization and stabilization of Rho small GTPase proteins for solution NMR studies |
| Q38715903 | Optogenetic activation of Plexin-B1 reveals contact repulsion between osteoclasts and osteoblasts |
| Q41981451 | Performance of ZDOCK and ZRANK in CAPRI rounds 13-19. |
| Q38022543 | Plexin structures are coming: opportunities for multilevel investigations of semaphorin guidance receptors, their cell signaling mechanisms, and functions |
| Q28585661 | Plexin-A2 and its ligand, Sema6A, control nucleus-centrosome coupling in migrating granule cells |
| Q34058331 | Plexin-B1 Activates NF-κB and IL-8 to Promote a Pro-Angiogenic Response in Endothelial Cells |
| Q52942729 | Plexin-B1 signalling promotes androgen receptor translocation to the nucleus |
| Q27676779 | Plexins Are GTPase-Activating Proteins for Rap and Are Activated by Induced Dimerization |
| Q37321840 | Plxnd1 expression in thymocytes regulates their intrathymic migration while that in thymic endothelium impacts medullary topology |
| Q36060930 | Proneural transcription factors regulate different steps of cortical neuron migration through Rnd-mediated inhibition of RhoA signaling |
| Q106519024 | RHOD binds effectors at the plasma membrane |
| Q37384449 | Refinement of the primary hydration shell model for molecular dynamics simulations of large proteins |
| Q24337827 | RhoD binds the Rab5 effector Rabankyrin-5 and has a role in trafficking of the platelet-derived growth factor receptor |
| Q44477786 | RhoD participates in the regulation of cell-cycle progression and centrosome duplication |
| Q24301477 | RhoD regulates cytoskeletal dynamics via the actin nucleation-promoting factor WASp homologue associated with actin Golgi membranes and microtubules |
| Q42411390 | Rosetta in CAPRI rounds 13-19. |
| Q46115863 | Score_set: a CAPRI benchmark for scoring protein complexes |
| Q41840576 | Selection of near-native poses in CAPRI rounds 13-19. |
| Q30157096 | Semaphorin 4D signaling requires the recruitment of phospholipase C gamma into the plexin-B1 receptor complex |
| Q24294818 | Semaphorin 5A and plexin-B3 inhibit human glioma cell motility through RhoGDIalpha-mediated inactivation of Rac1 GTPase |
| Q88333930 | Semaphorin4D-PlexinB1 Signaling Attenuates Photoreceptor Outer Segment Phagocytosis by Reducing Rac1 Activity of RPE Cells |
| Q21128780 | Structural basis for activation and non-canonical catalysis of the Rap GTPase activating protein domain of plexin |
| Q27664801 | Structural basis for semaphorin signalling through the plexin receptor |
| Q35110931 | Structural basis of Rnd1 binding to plexin Rho GTPase binding domains (RBDs) |
| Q24296802 | Structural basis of semaphorin-plexin recognition and viral mimicry from Sema7A and A39R complexes with PlexinC1 |
| Q24301370 | Structural basis of semaphorin-plexin signalling |
| Q35958062 | Structural mechanisms of plexin signaling |
| Q33769778 | Structure analyses reveal a regulated oligomerization mechanism of the PlexinD1/GIPC/myosin VI complex |
| Q42277883 | Structure and dynamics analysis on plexin-B1 Rho GTPase binding domain as a monomer and dimer |
| Q24309186 | Structure and function of the intracellular region of the plexin-b1 transmembrane receptor |
| Q38399347 | Structures of Ras superfamily effector complexes: What have we learnt in two decades? |
| Q36234368 | The GTPase-deficient Rnd Proteins Are Stabilized by Their Effectors |
| Q35218537 | The Rho GTPase Rnd1 suppresses mammary tumorigenesis and EMT by restraining Ras-MAPK signalling. |
| Q37200576 | The semaphorins: versatile regulators of tumour progression and tumour angiogenesis |
| Q42606532 | Thermodynamic characterization of two homologous protein complexes: associations of the semaphorin receptor plexin-B1 RhoGTPase binding domain with Rnd1 and active Rac1. |
| Q28539091 | Transmembrane recognition of the semaphorin co-receptors neuropilin 1 and plexin A1: coarse-grained simulations |
| Q37509059 | Transmembrane semaphorins: Multimodal signaling cues in development and cancer. |
| Q37228375 | Tyrosine phosphorylation in semaphorin signalling: shifting into overdrive. |
| Q26825018 | Understanding cell signalling systems: paving the way for new therapies |
| Q50985108 | c-Met and Other Cell Surface Molecules: Interaction, Activation and Functional Consequences |
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