scholarly article | Q13442814 |
P6179 | Dimensions Publication ID | 1009314308 |
P356 | DOI | 10.1038/NSMB.2556 |
P932 | PMC publication ID | 3703396 |
P698 | PubMed publication ID | 23686287 |
P5875 | ResearchGate publication ID | 236920688 |
P50 | author | Sebastian Fica | Q86825561 |
P2093 | author name string | Tao Wu | |
Matthew J Schellenberg | |||
Andrew M MacMillan | |||
Jonathan P Staley | |||
Paul LaPointe | |||
Dustin B Ritchie | |||
Karim A Atta | |||
P2860 | cites work | Prp8 protein: at the heart of the spliceosome | Q24537373 |
The C-terminal region of hPrp8 interacts with the conserved GU dinucleotide at the 5' splice site | Q24539330 | ||
Characterization of U6 snRNA-protein interactions | Q24539483 | ||
A general two-metal-ion mechanism for catalytic RNA | Q24562157 | ||
Large-scale proteomic analysis of the human spliceosome | Q24671785 | ||
Processing of X-ray diffraction data collected in oscillation mode | Q26778468 | ||
Bimolecular exon ligation by the human spliceosome bypasses early 3' splice site AG recognition and requires NTP hydrolysis | Q43206569 | ||
A novel role for a U5 snRNP protein in 3' splice site selection. | Q43728966 | ||
Opposing classes of prp8 alleles modulate the transition between the catalytic steps of pre-mRNA splicing | Q45828510 | ||
Is the spliceosome a ribonucleoprotein enzyme? | Q46668714 | ||
Suppression of multiple substrate mutations by spliceosomal prp8 alleles suggests functional correlations with ribosomal ambiguity mutants | Q47654036 | ||
U2–U6 RNA folding reveals a group II intron-like domain and a four-helix junction | Q57080150 | ||
Metal ion catalysis during splicing of premessenger RNA | Q58324056 | ||
Mutations in a yeast intron demonstrate the importance of specific conserved nucleotides for the two stages of nuclear mRNA splicing | Q68864416 | ||
Bimolecular exon ligation by the human spliceosome | Q73407427 | ||
Splicing factor Prp8 governs U4/U6 RNA unwinding during activation of the spliceosome | Q74453898 | ||
Artificial evolution of an enzyme active site: structural studies of three highly active mutants of Escherichia coli alkaline phosphatase | Q27638224 | ||
Crystal Structure of a Self-Spliced Group II Intron | Q27650229 | ||
DNA apurinic-apyrimidinic site binding and excision by endonuclease IV | Q27650316 | ||
Crystal structure of the -finger domain of Prp8 reveals analogy to ribosomal proteins | Q27652048 | ||
Structural elucidation of a PRP8 core domain from the heart of the spliceosome | Q27652426 | ||
Structure and function of an RNase H domain at the heart of the spliceosome | Q27652459 | ||
Reaction mechanism of alkaline phosphatase based on crystal structures. Two-metal ion catalysis | Q27659258 | ||
A novel and unified two-metal mechanism for DNA cleavage by type II and IA topoisomerases | Q27661756 | ||
Watching DNA polymerase η make a phosphodiester bond | Q27670704 | ||
Crystal structure of Prp8 reveals active site cavity of the spliceosome | Q27676016 | ||
Recognition of single-stranded DNA by nuclease P1: high resolution crystal structures of complexes with substrate analogs | Q27765264 | ||
Coot: model-building tools for molecular graphics | Q27860505 | ||
A graphical user interface to the CCP4 program suite | Q27860911 | ||
Refinement of macromolecular structures by the maximum-likelihood method | Q27861011 | ||
Automated main-chain model building by template matching and iterative fragment extension | Q27861082 | ||
5-Fluoroorotic acid as a selective agent in yeast molecular genetics | Q28131614 | ||
A novel base-pairing interaction between U2 and U6 snRNAs suggests a mechanism for the catalytic activation of the spliceosome | Q28201291 | ||
Comprehensive proteomic analysis of the human spliceosome | Q28201545 | ||
Three metal ions at the active site of the Tetrahymena group I ribozyme | Q28315032 | ||
Pre-mRNA splicing: awash in a sea of proteins | Q29547272 | ||
Preparation of high molecular weight RNA | Q29614859 | ||
Crystal structures of RNase H bound to an RNA/DNA hybrid: substrate specificity and metal-dependent catalysis | Q29619064 | ||
Yeast mRNA splicing in vitro | Q29620824 | ||
Spliceosome discards intermediates via the DEAH box ATPase Prp43p | Q33933327 | ||
Mutational analysis of pre-mRNA splicing in Saccharomyces cerevisiae using a sensitive new reporter gene, CUP1 | Q33960716 | ||
Mutagenesis of the yeast gene PRP8 reveals domains governing the specificity and fidelity of 3' splice site selection | Q33967671 | ||
Distinct domains of splicing factor Prp8 mediate different aspects of spliceosome activation | Q34033941 | ||
Crystal structure of a self-splicing group I intron with both exons | Q34324406 | ||
Suppressors of a cold-sensitive mutation in yeast U4 RNA define five domains in the splicing factor Prp8 that influence spliceosome activation | Q34610216 | ||
Allele-specific genetic interactions between Prp8 and RNA active site residues suggest a function for Prp8 at the catalytic core of the spliceosome. | Q35202911 | ||
Functional interactions of Prp8 with both splice sites at the spliceosomal catalytic center | Q35203137 | ||
The DEAH box ATPases Prp16 and Prp43 cooperate to proofread 5' splice site cleavage during pre-mRNA splicing | Q37043127 | ||
Metal ion catalysis during the exon-ligation step of nuclear pre-mRNA splicing: extending the parallels between the spliceosome and group II introns | Q38315124 | ||
Roles of PRP8 protein in the assembly of splicing complexes | Q41533943 | ||
Mutations in conserved intron sequences affect multiple steps in the yeast splicing pathway, particularly assembly of the spliceosome. | Q41899857 | ||
Dissection of Prp8 protein defines multiple interactions with crucial RNA sequences in the catalytic core of the spliceosome | Q42113100 | ||
Mutations in PRP43 that uncouple RNA-dependent NTPase activity and pre-mRNA splicing function | Q42397657 | ||
Metal-ion coordination by U6 small nuclear RNA contributes to catalysis in the spliceosome. | Q42679830 | ||
P4510 | describes a project that uses | ImageQuant | Q112270642 |
P433 | issue | 6 | |
P921 | main subject | structural biology | Q908902 |
P304 | page(s) | 728-734 | |
P577 | publication date | 2013-05-19 | |
P1433 | published in | Nature Structural & Molecular Biology | Q1071739 |
P1476 | title | A conformational switch in PRP8 mediates metal ion coordination that promotes pre-mRNA exon ligation | |
P478 | volume | 20 |
Q41598279 | A close-up look at the spliceosome, at last |
Q38180972 | A day in the life of the spliceosome |
Q33855473 | A mutation in a splicing factor that causes retinitis pigmentosa has a transcriptome-wide effect on mRNA splicing. |
Q38439978 | A network biology approach to understanding the importance of chameleon proteins in human physiology and pathology |
Q38344563 | Activating the branch-forming splicing pathway by reengineering the ribozyme component of a natural group II intron |
Q92536533 | An Allosteric Network for Spliceosome Activation Revealed by High-Throughput Suppressor Analysis in Saccharomyces cerevisiae |
Q41355872 | An unanticipated early function of DEAD-box ATPase Prp28 during commitment to splicing is modulated by U5 snRNP protein Prp8. |
Q35557059 | Auto-inhibitory Mechanism of the Human Mitochondrial RNase P Protein Complex |
Q30374636 | ChSeq: A database of chameleon sequences. |
Q27933427 | Conformational dynamics of stem II of the U2 snRNA. |
Q34467642 | Mechanisms and Regulation of Alternative Pre-mRNA Splicing |
Q34429362 | PRPF8 defects cause missplicing in myeloid malignancies. |
Q27937907 | Prp8 retinitis pigmentosa mutants cause defects in the transition between the catalytic steps of splicing |
Q34382976 | RNA catalyses nuclear pre-mRNA splicing |
Q43243492 | Regulation of constitutive and alternative mRNA splicing across the human transcriptome by PRPF8 is determined by 5' splice site strength |
Q38296438 | Stable tri-snRNP integration is accompanied by a major structural rearrangement of the spliceosome that is dependent on Prp8 interaction with the 5' splice site |
Q38183542 | Structural studies of the spliceosome: zooming into the heart of the machine. |
Q38833557 | Structural toggle in the RNaseH domain of Prp8 helps balance splicing fidelity and catalytic efficiency |
Q90316146 | Termination of pre-mRNA splicing requires that the ATPase and RNA unwindase Prp43p acts on the catalytic snRNA U6 |
Q38341998 | The molecular pathogenesis of the myelodysplastic syndromes |
Q26851952 | The noncoding RNA revolution-trashing old rules to forge new ones |
Q44835688 | Toggling in the spliceosome |
Q48127853 | Variants in the PRPF8 Gene are Associated with Glaucoma. |