Crystal structures of the E. coli transcription initiation complexes with a complete bubble

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Crystal structures of the E. coli transcription initiation complexes with a complete bubble is …
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P356DOI10.1016/J.MOLCEL.2015.03.010
P3181OpenCitations bibliographic resource ID2602875
P932PMC publication ID5567806
P698PubMed publication ID25866247

P50authorYuhong ZuoQ56876762
P2093author name stringThomas A Steitz
P2860cites workGE23077 binds to the RNA polymerase 'i' and 'i+1' sites and prevents the binding of initiating nucleotidesQ21128776
Structural basis of transcription initiationQ24608460
Analysis of E. coli promoter sequencesQ24629224
Role of the sigma subunit of Escherichia coli RNA polymerase in initiation. II. Release of sigma from ternary complexesQ67235325
Requirement for the .beta.,.gamma.-pyrophosphate bond of ATP in a stage between transcription initiation and elongation by Escherichia coli RNA polymeraseQ67897600
Constitutive function of a positively regulated promoter reveals new sequences essential for activityQ70175441
Escherichia coli proteins eluted from mono Q chromatography, a final step during RNA polymerase purification procedureQ75231674
Region 3.2 of the sigma subunit contributes to the binding of the 3'-initiating nucleotide in the RNA polymerase active center and facilitates promoter clearance during initiationQ83322978
Direct detection of abortive RNA transcripts in vivoQ24641939
Initial transcription by RNA polymerase proceeds through a DNA-scrunching mechanismQ24643943
Abortive initiation and productive initiation by RNA polymerase involve DNA scrunchingQ24643969
Processing of X-ray diffraction data collected in oscillation modeQ26778468
Structure of the bacterial RNA polymerase promoter specificity sigma subunitQ27638714
Structural basis of transcription initiation: RNA polymerase holoenzyme at 4 A resolutionQ27639011
Structural basis of transcription initiation: an RNA polymerase holoenzyme-DNA complexQ27639013
Structural Basis for Converting a General Transcription Factor into an Operon-Specific Virulence RegulatorQ27644445
Structural basis for transcription elongation by bacterial RNA polymeraseQ27646092
Initiation Complex Structure and Promoter ProofreadingQ27671177
Structural Basis for Promoter −10 Element Recognition by the Bacterial RNA Polymerase σ SubunitQ27675920
The Mechanism of E. coli RNA Polymerase Regulation by ppGpp Is Suggested by the Structure of their ComplexQ27677778
Phage T7 Gp2 inhibition of Escherichia coli RNA polymerase involves misappropriation of  70 domain 1.1Q27680578
Structure and function of the initially transcribing RNA polymerase II-TFIIB complexQ27683438
Structural basis of transcription initiation by bacterial RNA polymerase holoenzymeQ27684481
Structural basis for -10 promoter element melting by environmentally induced sigma factorsQ27689103
Coot: model-building tools for molecular graphicsQ27860505
Overview of the CCP4 suite and current developmentsQ27860782
REFMAC5 for the refinement of macromolecular crystal structuresQ27860905
Phasercrystallographic softwareQ27860930
Structural organization of bacterial RNA polymerase holoenzyme and the RNA polymerase-promoter open complexQ33957853
Autoregulation of a bacterial sigma factor explored by using segmental isotopic labeling and NMRQ34064818
The whole set of constitutive promoters recognized by RNA polymerase RpoD holoenzyme of Escherichia coli.Q35113090
Structural basis for transcription reactivation by RapAQ35129152
Mechanism of bacterial transcription initiation: RNA polymerase - promoter binding, isomerization to initiation-competent open complexes, and initiation of RNA synthesisQ36228825
Promoter opening via a DNA fork junction binding activityQ36316824
Transcription initiation by mix and match elements: flexibility for polymerase binding to bacterial promotersQ37034702
Insights into the mechanism of initial transcription in Escherichia coli RNA polymeraseQ37272203
The role of RNA polymerase sigma subunit in promoter-independent initiation of transcription.Q37357569
Bacterial sigma factors: a historical, structural, and genomic perspectiveQ38227104
Distinct functions of the RNA polymerase σ subunit region 3.2 in RNA priming and promoter escapeQ38735233
A noncycling activity assay for the omega subunit of Escherichia coli RNA polymeraseQ41049256
Changes in conserved region 3 of Escherichia coli sigma 70 reduce abortive transcription and enhance promoter escapeQ42690421
A stressed intermediate in the formation of stably initiated RNA chains at the Escherichia coli lac UV5 promoter.Q54139398
P433issue3
P921main subjectEscherichia coliQ25419
crystal structureQ895901
P304page(s)534-540
P577publication date2015-04-09
P1433published inMolecular CellQ3319468
P1476titleCrystal structures of the E. coli transcription initiation complexes with a complete bubble
P478volume58