Human box H/ACA pseudouridylation guide RNA machinery

scientific article

Human box H/ACA pseudouridylation guide RNA machinery is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1128/MCB.24.13.5797-5807.2004
P3181OpenCitations bibliographic resource ID1997377
P932PMC publication ID480876
P698PubMed publication ID15199136

P50authorEdouard BertrandQ57645202
P2093author name stringTamás Kiss
Arnold M Kiss
Beáta E Jády
P2860cites workThe family of box ACA small nucleolar RNAs is defined by an evolutionarily conserved secondary structure and ubiquitous sequence elements essential for RNA accumulationQ22065786
In vitro assembly of human H/ACA small nucleolar RNPs reveals unique features of U17 and telomerase RNAsQ22253860
Classification of gas5 as a multi-small-nucleolar-RNA (snoRNA) host gene and a member of the 5'-terminal oligopyrimidine gene family reveals common features of snoRNA host genesQ24522827
Human 18 S ribosomal RNA sequence inferred from DNA sequence. Variations in 18 S sequences and secondary modification patterns between vertebratesQ24529930
Nucleolar localization signals of box H/ACA small nucleolar RNAsQ24534435
Small nucleolar RNA-guided post-transcriptional modification of cellular RNAsQ24535572
A small nucleolar guide RNA functions both in 2'-O-ribose methylation and pseudouridylation of the U5 spliceosomal RNAQ24536377
Cajal body-specific small nuclear RNAs: a novel class of 2'-O-methylation and pseudouridylation guide RNAsQ24536429
Human U19 intron-encoded snoRNA is processed from a long primary transcript that possesses little potential for protein codingQ24539235
A Cajal body-specific pseudouridylation guide RNA is composed of two box H/ACA snoRNA-like domainsQ24540398
Identification of 13 novel human modification guide RNAsQ24642043
Characterization of the intron-encoded U19 RNA, a new mammalian small nucleolar RNA that is not associated with fibrillarinQ24650542
Identification of brain-specific and imprinted small nucleolar RNA genes exhibiting an unusual genomic organizationQ24673252
Human autoantibody to a novel protein of the nuclear coiled body: immunological characterization and cDNA cloning of p80-coilinQ24680842
Crystal structure of a fibrillarin homologue from Methanococcus jannaschii, a hyperthermophile, at 1.6 A resolutionQ27621159
The box H + ACA snoRNAs carry Cbf5p, the putative rRNA pseudouridine synthaseQ27935785
Pseudouridine mapping in the Saccharomyces cerevisiae spliceosomal U small nuclear RNAs (snRNAs) reveals that pseudouridine synthase pus1p exhibits a dual substrate specificity for U2 snRNA and tRNA.Q27937578
Site-specific ribose methylation of preribosomal RNA: a novel function for small nucleolar RNAsQ27939349
Pseudouridine in RNA: what, where, how, and whyQ28141248
RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouseQ28198621
Small nucleolar RNAs: an abundant group of noncoding RNAs with diverse cellular functionsQ28217265
Site-specific pseudouridine formation in preribosomal RNA is guided by small nucleolar RNAsQ28240607
The numerous modified nucleotides in eukaryotic ribosomal RNAQ28263677
A mammalian gene with introns instead of exons generating stable RNA productsQ28273163
Targeted ribose methylation of RNA in vivo directed by tailored antisense RNA guidesQ28294050
Mapping to nucleotide resolution of pseudouridine residues in large subunit ribosomal RNAs from representative eukaryotes, prokaryotes, archaebacteria, mitochondria and chloroplastsQ28304454
rRNA modifications and ribosome functionQ28610126
Small Nucleolar RNAsQ29300155
The RNA world of the nucleolus: two major families of small RNAs defined by different box elements with related functionsQ29616485
Small nucleolar RNAs direct site-specific synthesis of pseudouridine in ribosomal RNAQ29618482
Biogenesis of small nucleolar ribonucleoproteinsQ29619824
Yeast snR30 is a small nucleolar RNA required for 18S rRNA synthesisQ29620872
The host gene for intronic U17 small nucleolar RNAs in mammals has no protein-coding potential and is a member of the 5'-terminal oligopyrimidine gene familyQ33775140
Elements essential for accumulation and function of small nucleolar RNAs directing site-specific pseudouridylation of ribosomal RNAsQ33890338
Point mutations in yeast CBF5 can abolish in vivo pseudouridylation of rRNAQ33959977
Small nucleolar RNAs encoded by introns of the human cell cycle regulatory gene RCC1.Q34055897
U17/snR30 is a ubiquitous snoRNA with two conserved sequence motifs essential for 18S rRNA production.Q34293363
Small nucleolar RNAs: versatile trans-acting molecules of ancient evolutionary origin.Q34546169
Ribosomal RNA pseudouridines and pseudouridine synthasesQ34571025
Modification of Sm small nuclear RNAs occurs in the nucleoplasmic Cajal body following import from the cytoplasmQ34985924
RNA-guided nucleotide modification of ribosomal and other RNAsQ34997177
Three small nucleolar RNAs of unique nucleotide sequencesQ36064893
Box H and box ACA are nucleolar localization elements of U17 small nucleolar RNA.Q36939903
The RNA modification database--1998.Q38554658
Transfer RNA modificationQ39664935
A comprehensive database for the small nucleolar RNAs from Saccharomyces cerevisiaeQ39726390
A common sequence motif determines the Cajal body-specific localization of box H/ACA scaRNAs.Q39831945
The importance of being modified: roles of modified nucleosides and Mg2+ in RNA structure and function.Q40998399
TOP genes: a translationally controlled class of genes including those coding for ribosomal proteinsQ41310368
Pseudouridine distribution in mammalian 18 S ribosomal RNA. A major cluster in the central region of the moleculeQ42119854
The pseudouridine contents of the ribosomal ribonucleic acids of three vertebrate species. Numerical correspondence between pseudouridine residues and 2'-O-methyl groups is not always conservedQ42933094
Four newly located pseudouridylate residues in Escherichia coli 23S ribosomal RNA are all at the peptidyltransferase center: analysis by the application of a new sequencing technique.Q54651150
Analysis of pre-mRNA processing in transfected plant protoplastsQ67666621
Exonucleolytic processing of small nucleolar RNAs from pre-mRNA intronsQ72349208
9 Specific labeling of 3′ termini of RNA with T4 RNA ligaseQ72608477
P433issue13
P407language of work or nameEnglishQ1860
P921main subjectpseudouridineQ420445
cell biologyQ7141
P304page(s)5797-5807
P577publication date2004-07-01
P1433published inMolecular and Cellular BiologyQ3319478
P1476titleHuman box H/ACA pseudouridylation guide RNA machinery
P478volume24

Reverse relations

cites work (P2860)
Q90278082"Lost and Found": snoRNA Annotation in the Xenopus Genome and Implications for Evolutionary Studies
Q4204978518S rRNA processing requires base pairings of snR30 H/ACA snoRNA to eukaryote-specific 18S sequences
Q389144205' End Nicotinamide Adenine Dinucleotide Cap in Human Cells Promotes RNA Decay through DXO-Mediated deNADding.
Q51084138A combined computational and experimental analysis of two families of snoRNA genes from Caenorhabditis elegans, revealing the expression and evolution pattern of snoRNAs in nematodes.
Q39086567A comprehensive benchmark of RNA-RNA interaction prediction tools for all domains of life.
Q24537497A computational screen for mammalian pseudouridylation guide H/ACA RNAs
Q28238122A conserved WD40 protein binds the Cajal body localization signal of scaRNP particles
Q36900542A dedicated computational approach for the identification of archaeal H/ACA sRNAs
Q24537378A genome-wide analysis of C/D and H/ACA-like small nucleolar RNAs in Trypanosoma brucei reveals a trypanosome-specific pattern of rRNA modification
Q89850950A guide to naming human non-coding RNA genes
Q24298134A novel TBP-associated factor of SL1 functions in RNA polymerase I transcription
Q24812999A novel experimental approach for systematic identification of box H/ACA snoRNAs from eukaryotes
Q41896525A previously unidentified activity of yeast and mouse RNA:pseudouridine synthases 1 (Pus1p) on tRNAs
Q40339203Animal snoRNAs and scaRNAs with exceptional structures
Q36900525Biochemical purification of box H/ACA RNPs involved in pseudouridylation
Q91717647Biogenesis and functions of aminocarboxypropyluridine in tRNA
Q36768167Biogenesis and intranuclear trafficking of human box C/D and H/ACA RNPs
Q50295887Box H/ACA snoRNP transforms uridine to pseudouridine in pre-rRNA
Q38050096Cajal bodies: where form meets function
Q33876249Chemical and structural effects of base modifications in messenger RNA.
Q43240772Cotranscriptional recognition of human intronic box H/ACA snoRNAs occurs in a splicing-independent manner.
Q39344093CpG island hypermethylation-associated silencing of small nucleolar RNAs in human cancer
Q27934253Different mechanisms for pseudouridine formation in yeast 5S and 5.8S rRNAs
Q24647530Dyskeratosis congenita mutations in the H/ACA domain of human telomerase RNA affect its assembly into a pre-RNP
Q36550804Dysregulated A to I RNA editing and non-coding RNAs in neurodegeneration
Q39634021Efficient and specific knockdown of small non-coding RNAs in mammalian cells and in mice
Q36003437Enhanced snoMEN Vectors Facilitate Establishment of GFP-HIF-1α Protein Replacement Human Cell Lines
Q28768927Evolution of small nucleolar RNAs in nematodes
Q21090514Expression and processing of a small nucleolar RNA from the Epstein-Barr virus genome
Q37888019From snoRNA to miRNA: Dual function regulatory non-coding RNAs
Q91902372Functional diversity of small nucleolar RNAs
Q37034276Functionality and substrate specificity of human box H/ACA guide RNAs
Q34169607Functions and mechanisms of spliceosomal small nuclear RNA pseudouridylation
Q35646816Genome-wide analyses of retrogenes derived from the human box H/ACA snoRNAs
Q33411083Genome-wide analysis of chicken snoRNAs provides unique implications for the evolution of vertebrate snoRNAs
Q90706174Guide snoRNAs: Drivers or Passengers in Human Disease?
Q64913198H/ACA box small nucleolar RNA 7B acts as an oncogene and a potential prognostic biomarker in breast cancer.
Q28748535Heads or tails: L1 insertion-associated 5' homopolymeric sequences
Q89629574Herpes simplex virus encephalitis of childhood: inborn errors of central nervous system cell-intrinsic immunity
Q91736686Human SNORA31 variations impair cortical neuron-intrinsic immunity to HSV-1 and underlie herpes simplex encephalitis
Q33283179Human and mouse protein-noncoding snoRNA host genes with dissimilar nucleotide sequences show chromosomal synteny
Q34513878Human box C/D snoRNAs with miRNA like functions: expanding the range of regulatory RNAs
Q42323459Human intron-encoded Alu RNAs are processed and packaged into Wdr79-associated nucleoplasmic box H/ACA RNPs.
Q33504519Human miRNA precursors with box H/ACA snoRNA features
Q34115434Identification of discrete classes of small nucleolar RNA featuring different ends and RNA binding protein dependency
Q87722962Indoleamine 2,3-dioxygenase inhibition alters the non-coding RNA transcriptome following renal ischemia-reperfusion injury
Q37385183Insight into the Protein Components of the Box H/ACA RNP
Q34567934Insight into the mechanisms and functions of spliceosomal snRNA pseudouridylation
Q41526267Lactobacillus plantarum Strains Can Enhance Human Mucosal and Systemic Immunity and Prevent Non-steroidal Anti-inflammatory Drug Induced Reduction in T Regulatory Cells
Q37596372Looking into laminin receptor: critical discussion regarding the non-integrin 37/67-kDa laminin receptor/RPSA protein
Q37344528MicroRNAs with a nucleolar location
Q33428456Mining small RNA sequencing data: a new approach to identify small nucleolar RNAs in Arabidopsis
Q34285329Multiple myeloma-associated chromosomal translocation activates orphan snoRNA ACA11 to suppress oxidative stress.
Q22066043Non-coding RNA
Q37139278Non-coding RNAs and cancer
Q37706520Non-coding RNAs: identification of cancer-associated microRNAs by gene profiling
Q22121992Non-coding RNAs: lessons from the small nuclear and small nucleolar RNAs
Q36768163Noncoding RNAs of the H/ACA family
Q28300721Novel small Cajal-body-specific RNAs identified in Drosophila: probing guide RNA function
Q46295641Orchestrated positioning of post-transcriptional modifications at the branch point recognition region of U2 snRNA.
Q34169614Post-transcriptional modification of RNAs by artificial Box H/ACA and Box C/D RNPs
Q40520534Post-transcriptional modification of spliceosomal RNAs is normal in SMN-deficient cells
Q58575460Post-transcriptional pseudouridylation in mRNA as well as in some major types of noncoding RNAs
Q35826226Postexposure treatment with the live-attenuated rabies virus (RV) vaccine TriGAS triggers the clearance of wild-type RV from the Central Nervous System (CNS) through the rapid induction of genes relevant to adaptive immunity in CNS tissues
Q47161392Posttranscriptional RNA Pseudouridylation
Q89741561Prostate cancer risk SNP rs10993994 is a trans-eQTL for SNHG11 mediated through MSMB
Q28118369Pseudouridine synthase 1: a site-specific synthase without strict sequence recognition requirements
Q36190987Pseudouridine: still mysterious, but never a fake (uridine)!
Q38989338RNA modification in Cajal bodies
Q24645679Refined mapping of X-linked reticulate pigmentary disorder and sequencing of candidate genes
Q26797350Regulatory Roles of Non-Coding RNAs in Colorectal Cancer
Q64094645SNHG15 is a bifunctional MYC-regulated noncoding locus encoding a lncRNA that promotes cell proliferation, invasion and drug resistance in colorectal cancer by interacting with AIF
Q39081916Severity of X-linked dyskeratosis congenita (DKCX) cellular defects is not directly related to dyskerin (DKC1) activity in ribosomal RNA biogenesis or mRNA translation.
Q27016076Small RNAs with big implications: new insights into H/ACA snoRNA function and their role in human disease
Q37193077Small nucleolar RNA-derived microRNA hsa-miR-1291 modulates cellular drug disposition through direct targeting of ABC transporter ABCC1
Q37346566Small nucleolar RNAs in cancer
Q36088922Small regulatory RNAs in mammals
Q34132148Spliceosomal snRNA modifications and their function
Q44208453Structural and functional analysis of the ovine laminin receptor gene (RPSA): Possible involvement of the LRP/LR protein in scrapie response.
Q33526470Systematic identification and evolutionary features of rhesus monkey small nucleolar RNAs
Q24680286Telomerase RNA level limits telomere maintenance in X-linked dyskeratosis congenita
Q33899947Telomerase reverse-transcriptase homozygous mutations in autosomal recessive dyskeratosis congenita and Hoyeraal-Hreidarsson syndrome
Q39380162Tetraspanins stimulate protein synthesis in myeloma cell lines
Q57166264The Nucleolus
Q38694934The Phosphatidylinositol 3-kinase Pathway as a Potential Therapeutic Target in Bladder Cancer.
Q27935982The Saccharomyces cerevisiae Pus2 protein encoded by YGL063w ORF is a mitochondrial tRNA:Psi27/28-synthase
Q35688622The accumulation and not the specific activity of telomerase ribonucleoprotein determines telomere maintenance deficiency in X-linked dyskeratosis congenita
Q26862159The emerging landscape of small nucleolar RNAs in cell biology
Q36045974The hepatic transcriptome of young suckling and aging intrauterine growth restricted male rats
Q35038202The many facets of H/ACA ribonucleoproteins
Q33608901The scaRNA2 is produced by an independent transcription unit and its processing is directed by the encoding region
Q38569103Transcriptome-wide dynamics of RNA pseudouridylation
Q38716230Transcriptomic Analysis of THP-1 Macrophages Exposed to Lipoprotein Hydrolysis Products Generated by Lipoprotein Lipase.
Q24657990Unifying evolutionary and thermodynamic information for RNA folding of multiple alignments
Q38647597UsnRNP biogenesis: mechanisms and regulation
Q24672901snoSeeker: an advanced computational package for screening of guide and orphan snoRNA genes in the human genome

Search more.