The transcriptional program in the response of human fibroblasts to serum

scientific article

The transcriptional program in the response of human fibroblasts to serum is …
instance of (P31):
scholarly articleQ13442814

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P819ADS bibcode1999Sci...283...83I
P356DOI10.1126/SCIENCE.283.5398.83
P3181OpenCitations bibliographic resource ID618245
P698PubMed publication ID9872747

P50authorDouglas T. RossQ67213559
Troy MooreQ123705503
Patrick O. BrownQ546092
David BotsteinQ1173787
Michael B. EisenQ3308179
P2093author name stringJ C Lee
L M Staudt
M S Boguski
J M Trent
D Shalon
G Schuler
J Hudson
V R Iyer
D Lashkari
P433issue5398
P407language of work or nameEnglishQ1860
P304page(s)83-7
P577publication date1999-01-01
P1433published inScienceQ192864
P1476titleThe transcriptional program in the response of human fibroblasts to serum
P478volume283

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Q30892639Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray
Q35882709Genome-wide mapping of Myc binding and gene regulation in serum-stimulated fibroblasts.
Q36458938Genome-wide transcriptional analysis of the human cell cycle identifies genes differentially regulated in normal and cancer cells
Q34368568Genomic DNA standards for gene expression profiling in Mycobacterium tuberculosis
Q37144104Genomic analysis of epithelial ovarian cancer
Q48616351Genomic analysis of immediate/early response to shear stress in human coronary artery endothelial cells
Q35099335Genomic analysis of stress response genes
Q34495095Genomic and proteomic perspectives in cell culture engineering
Q33824748Genomic biology
Q35035645Genomic interrogation of mechanism(s) underlying cellular responses to toxicants
Q33860595Genomic-scale gene expression analysis of lymphocyte growth, tolerance and malignancy.
Q33860606Genomic-scale gene expression profiling of normal and malignant immune cells
Q40550624Getting the right cells to the array: Gene expression microarray analysis of cell mixtures and sorted cells
Q36745784Gingival wound healing: an essential response disturbed by aging?
Q33995875Global analysis of Escherichia coli gene expression during the acetate-induced acid tolerance response
Q39539461Global analysis of herpes simplex virus type 1 transcription using an oligonucleotide-based DNA microarray
Q34075213Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays
Q33323393Global identification of Myc target genes reveals its direct role in mitochondrial biogenesis and its E-box usage in vivo
Q36295396Global modulation of cellular transcription by human cytomegalovirus is initiated by viral glycoprotein B.
Q35131288Global pattern of pairwise relationship in genetic network
Q40639635Global/temporal gene expression in diaphragm and hindlimb muscles of dystrophin-deficient (mdx) mice
Q34229510Glycosylphosphatidyl inositol-anchored protein (GPI-80) gene expression is correlated with human thymoma stage
Q40250423Gold nanoparticle probe-based gene expression analysis with unamplified total human RNA.
Q34093269Gonadotropin-releasing hormone receptor-coupled gene network organization
Q43571535Growth factor-specific signaling pathway stimulation and gene expression mediated by ErbB receptors
Q40933966Growth state-dependent regulation of plasminogen activator inhibitor type-1 gene expression during epithelial cell stimulation by serum and transforming growth factor-beta1.
Q40424360HIV-1 infection initiates changes in the expression of a wide array of genes in U937 promonocytes and HUT78 T cells
Q37310602Hepatoma-derived growth factor and its role in keloid pathogenesis
Q28513661Heterodimerization between members of the Nur subfamily of orphan nuclear receptors as a novel mechanism for gene activation
Q34492533Heterogeneous nuclear ribonucleoprotein-A2/B1 modulate collagen prolyl 4-hydroxylase, alpha (I) mRNA stability
Q28703397Hierarchical Dirichlet process model for gene expression clustering
Q38617945High copy and stable expression of the xylanase XynHB in Saccharomyces cerevisiae by rDNA-mediated integration
Q28343494High density oligonucleotide array analysis of interferon- alpha2a sensitivity and transcriptional response in melanoma cells
Q30836414High throughput analysis of gene expression in the human brain
Q33910529High throughput gene expression screening: its emerging role in drug discovery
Q34187818High-density arrays and insights into genome function.
Q28543141High-glucose inhibits human fibroblast cell migration in wound healing via repression of bFGF-regulating JNK phosphorylation
Q35027178High-resolution quantification of specific mRNA levels in human brain autopsies and biopsies
Q33831060Hijacking HES1: how tumors co-opt the anti-differentiation strategies of quiescent cells
Q35899292Host microarray analysis reveals a role for the Salmonella response regulator phoP in human macrophage cell death
Q51523253Human Fibroblast Sheet Promotes Human Pancreatic Islet Survival and Function In Vitro.
Q35114432Human gingival fibroblasts display a non-fibrotic phenotype distinct from skin fibroblasts in three-dimensional cultures
Q47444302Human stanniocalcin-1 or -2 expressed in mice reduces bone size and severely inhibits cranial intramembranous bone growth
Q30876351Hyperosmotic stress stimulates promoter activity and regulates cellular utilization of the serum- and glucocorticoid-inducible protein kinase (Sgk) by a p38 MAPK-dependent pathway
Q38288348Identification and characterization of transcription factor target genes using gene-targeted mice
Q46304634Identification and potential role of PSD-95 in Schwann cells
Q28474350Identification of G1-regulated genes in normally cycling human cells
Q24292679Identification of a novel cell cycle regulated gene, HURP, overexpressed in human hepatocellular carcinoma
Q31109027Identification of a robust gene signature that predicts breast cancer outcome in independent data sets
Q34503465Identification of a transcriptional signature for the wound healing continuum
Q37348740Identification of cell cycle-regulated genes periodically expressed in U2OS cells and their regulation by FOXM1 and E2F transcription factors
Q30758961Identification of differentially expressed genes in immortalized human bronchial epithelial cell line as a model for in vitro study of lung carcinogenesis
Q40853089Identification of differentially expressed proteins between human hepatoma and normal liver cell lines by two-dimensional electrophoresis and liquid chromatography-ion trap mass spectrometry
Q44998714Identification of differentially regulated genes in fetal wounds during regenerative repair
Q36667026Identification of eukaryotic mRNAs that are translated at reduced cap binding complex eIF4F concentrations using a cDNA microarray
Q33454995Identification of gene co-regulatory modules and associated cis-elements involved in degenerative heart disease
Q55383172Identification of genes associated with the progression of adult T cell leukemia (ATL).
Q35747717Identification of genes involved in resistance to interferon-alpha in cutaneous T-cell lymphoma
Q29619131Identification of genes periodically expressed in the human cell cycle and their expression in tumors
Q30664150Identification of hypoxia-responsive genes in a dopaminergic cell line by subtractive cDNA libraries and microarray analysis
Q28679059Identification of novel MAP kinase pathway signaling targets by functional proteomics and mass spectrometry
Q34578542Identification of novel ethanol-sensitive genes by expression profiling
Q38304283Identification of novel hypoxia dependent and independent target genes of the von Hippel-Lindau (VHL) tumour suppressor by mRNA differential expression profiling
Q36227601Identification of primary transcriptional regulation of cell cycle-regulated genes upon DNA damage
Q90395240Identification of tissue-specific tumor biomarker using different optimization algorithms
Q38344923Identification of transcription factor binding sites upstream of human genes regulated by the phosphatidylinositol 3-kinase and MEK/ERK signaling pathways
Q36779966Identification of transforming growth factor-beta- regulated genes in caenorhabditis elegans by differential hybridization of arrayed cDNAs
Q46925970Identification of valid housekeeping genes and antioxidant enzyme gene expression change in the aging rat liver
Q35037940Identification of wound healing/regeneration quantitative trait loci (QTL) at multiple time points that explain seventy percent of variance in (MRL/MpJ and SJL/J) mice F2 population
Q42040118Immediate-early and delayed primary response genes are distinct in function and genomic architecture
Q38521800Impact of commensal microbiota on murine gastrointestinal tract gene ontologies
Q37092950Impact of human cytomegalovirus latent infection on myeloid progenitor cell gene expression
Q73637675Impact of human genome sequencing for in silico target discovery
Q40127249Impact of supervised gene signatures of early hypoxia on patient survival
Q24554299Importin-alpha mediates the regulated nuclear targeting of serum- and glucocorticoid-inducible protein kinase (Sgk) by recognition of a nuclear localization signal in the kinase central domain
Q42006641In vitro two-dimensional and three-dimensional tenocyte culture for tendon tissue engineering
Q39887763Increased genomic instability and altered chromosomal protein phosphorylation timing in HRAS-transformed mouse fibroblasts.
Q24799053Incremental genetic K-means algorithm and its application in gene expression data analysis
Q34762457Individuality and variation in gene expression patterns in human blood
Q30714274Induction of GADD45 and JNK/SAPK-dependent apoptosis following inducible expression of BRCA1.
Q33968056Induction of beta3-integrin gene expression by sustained activation of the Ras-regulated Raf-MEK-extracellular signal-regulated kinase signaling pathway
Q39681563Induction of extracellular matrix-remodeling genes by the senescence-associated protein APA-1
Q44070588Induction of hepatitis B virus gene expression at low temperature
Q33535230Inference of gene regulatory networks using time-series data: a survey
Q54623001Influence of serum on adult and fetal dermal fibroblast migration, adhesion, and collagen expression.
Q30643851Informatic selection of a neural crest-melanocyte cDNA set for microarray analysis
Q34032945Informative gene selection and direct classification of tumor based on Chi-square test of pairwise gene interactions
Q25257037Integrated analysis of gene expression by Association Rules Discovery
Q33932468Integrated studies on plant biology using multiparallel techniques
Q40344301Integration site selection by HIV-based vectors in dividing and growth-arrested IMR-90 lung fibroblasts.
Q34610562Interactions with fibroblasts are distinct in Basal-like and luminal breast cancers.
Q35070759Interferon regulatory factor 7 protects against vascular smooth muscle cell proliferation and neointima formation
Q53478096Intra-abdominal adhesion formation induces anti-oxidative injury, enhances cell proliferation, and prevents complement-mediated lysis.
Q37182102Invasion emerges from cancer cell adaptation to competitive microenvironments: quantitative predictions from multiscale mathematical models
Q35842938Isoform diversity and its importance for axon regeneration.
Q21134805Isoform diversity and regulation in peripheral and central neurons revealed through RNA-Seq
Q24551019Isolation of a novel human gene, MARKL1, homologous to MARK3 and its involvement in hepatocellular carcinogenesis
Q28478063Ixr1 is required for the expression of the ribonucleotide reductase Rnr1 and maintenance of dNTP pools
Q39079709JNK is necessary for oligodendrocyte precursor cell proliferation induced by the conditioned medium from B104 neuroblastoma cells
Q33286764Joint mapping of genes and conditions via multidimensional unfolding analysis
Q44857428Kick-starting the cell cycle: From growth-factor stimulation to initiation of DNA replication
Q30582293Knowledge discovery in gene-expression-microarray data: mining the information output of the genome
Q42500933Laminin-5-mediated gene expression in human prostate carcinoma cells.
Q34605224Large-scale gene expression analysis in molecular target discovery
Q31704628Large-scale identification of secreted and membrane-associated gene products using DNA microarrays
Q30792211Large-scale statistical analyses of rice ESTs reveal correlated patterns of gene expression
Q30769513Laser-guided direct writing for applications in biotechnology
Q38521378Learnability-based further prediction of gene functions in Gene Ontology
Q37723809Linking cell structure to gene regulation: signaling events and expression controls on the model genes PAI-1 and CTGF.
Q42115681Live fibroblast harvest reveals surface marker shift in vitro
Q31814797Live-cell monitoring of periodic gene expression in synchronous human cells identifies Forkhead genes involved in cell cycle control
Q31153294Loading and preparing data for analysis in spotfire
Q37388830Local depletion of DNA methylation identifies a repressive p53 regulatory region in the NEK2 promoter
Q62050224Long-term EGF/serum-treated human thyrocytes mimic papillary thyroid carcinomas with regard to gene expression
Q35730407Lung Beractant Increases Free Cytosolic Levels of Ca2+ in Human Lung Fibroblasts
Q34046234Malaria research in the post-genomic era.
Q34514417Mapping and analysis of quantitative trait loci in experimental populations
Q31834439Mast cell tryptase activates extracellular-regulated kinases (p44/p42) in airway smooth-muscle cells: importance of proteolytic events, time course, and role in mediating mitogenesis
Q33928495Mechanism-derived gene expression signatures and predictive biomarkers in clinical oncology
Q34571757Melanoma-stroma interactions: structural and functional aspects
Q37106719Mesenchymal cells reactivate Snail1 expression to drive three-dimensional invasion programs
Q35627324Messenger RNA translation state: the second dimension of high-throughput expression screening
Q39978520Met-driven invasive growth involves transcriptional regulation of Arhgap12.
Q36240688Meta-analysis reveals conserved cell cycle transcriptional network across multiple human cell types
Q30639337Methods and approaches in the analysis of gene expression data
Q33325697Methods for simultaneously identifying coherent local clusters with smooth global patterns in gene expression profiles
Q35636041MiR-191 Regulates Primary Human Fibroblast Proliferation and Directly Targets Multiple Oncogenes
Q36113404Mice, microarrays, and the genetic diversity of the brain
Q33803580Microarray analysis identifies interferon-inducible genes and Stat-1 as major transcriptional targets of human papillomavirus type 31.
Q44207294Microarray analysis of H2O2-, HNE-, or tBH-treated ARPE-19 cells
Q24805445Microarray analysis of gene expression during the cell cycle
Q35748609Microarray analysis of newly synthesized RNA in cells and animals
Q41693910Microarray analysis of replicative senescence
Q35089680Microarray expression profiling identifies genes with altered expression in HDL-deficient mice
Q35144043Microarray-based characterization of differential gene expression during vocal fold wound healing in rats
Q31922430Microarrays: lost in a storm of data?
Q42116777Microsurgery flap in endodontic surgery: case report.
Q33759582Mining functionally relevant gene sets for analyzing physiologically novel clinical expression data
Q30790881Mining gene expression data using a novel approach based on hidden Markov models
Q24797712Model selection and efficiency testing for normalization of cDNA microarray data
Q42045002Modeling colon adenocarcinomas in vitro a 3D co-culture system induces cancer-relevant pathways upon tumor cell and stromal fibroblast interaction
Q33278609Modeling human cancer-related regulatory modules by GA-RNN hybrid algorithms
Q33835021Modulation of cellular and viral gene expression by the latency-associated nuclear antigen of Kaposi's sarcoma-associated herpesvirus
Q33779395Modulation of growth factor signaling by gangliosides: positive or negative?
Q84975835Modulation of metallothionein isoforms is associated with collagen deposition in proliferating keloid fibroblasts in vitro
Q33848660Molecular biology in cytopathology: current applications and future directions
Q46435220Molecular characterization of rat gastric mucosal response to potent acid inhibition
Q40159368Molecular tools for cell and systems biology
Q33742739Molecular-pathological diagnosis of gastrointestinal tissues and its contribution to cancer histopathology
Q38295552Monitoring G-protein-coupled receptor signaling with DNA microarrays and real-time polymerase chain reaction
Q40831715Monitoring cellular responses to Listeria monocytogenes with oligonucleotide arrays
Q33884963Monitoring genome-wide expression in plants
Q43678788Monitoring signal transduction in cancer: cDNA microarray for semiquantitative analysis
Q38066944More epigenetic hits than meets the eye: microRNAs and genes associated with the tumorigenesis of retinoblastoma
Q36830707Morphogens, morphostats, microarchitecture and malignancy
Q24792102Multi-faceted, multi-versatile microarray: simultaneous detection of many viruses and their expression profiles
Q33877588Multiple E2F-induced microRNAs prevent replicative stress in response to mitogenic signaling.
Q33360100Multiple actions of lysophosphatidic acid on fibroblasts revealed by transcriptional profiling
Q74106093Multiple cytokines regulate the expression of extracellular superoxide dismutase in human vascular smooth muscle cells
Q35159770Multiple differences in gene expression in regulatory Valpha 24Jalpha Q T cells from identical twins discordant for type I diabetes
Q40883144Multiple growth factor induction of a murine early response gene that complements a lethal defect in yeast ribosome biogenesis.
Q35098367Myofibroblast differentiation is induced in keratinocyte-fibroblast co-cultures and is antagonistically regulated by endogenous transforming growth factor-beta and interleukin-1
Q30843369Myoseverin, a microtubule-binding molecule with novel cellular effects
Q33403926NIFTI: an evolutionary approach for finding number of clusters in microarray data
Q33948870Natural biology of polyomavirus middle T antigen
Q34325306Navigating gene expression using microarrays--a technology review
Q73514011New approach to gene expression analysis
Q33180878New developments in the analysis of gene expression
Q33776084New dimensionality reduction methods for the representation of high dimensional 'omics' data
Q34467859New functions for DNA binding domains
Q31144150Nonparametric relevance-shifted multiple testing procedures for the analysis of high-dimensional multivariate data with small sample sizes
Q34286739Normal p53 function in primary cells deficient for Siah genes.
Q24802808Normalization and analysis of DNA microarray data by self-consistency and local regression
Q40751988Novel pathways associated with bypassing cellular senescence in human prostate epithelial cells
Q34564211Nuclear myosin is ubiquitously expressed and evolutionary conserved in vertebrates.
Q40581828Nuclear reorganization of mammalian DNA synthesis prior to cell cycle exit
Q38602527Nuclear shift of hnRNP K protein in neoplasms and other states of enhanced cell proliferation.
Q33801598Observing the living genome
Q51733840Obtaining insights from high-dimensional data: sparse principal covariates regression.
Q24806117Oligodeoxyribonucleotide probe accessibility on a three-dimensional DNA microarray surface and the effect of hybridization time on the accuracy of expression ratios
Q40093542Oncogenic pathways impinging on the G2-restriction point
Q29031506Open systems: panoramic views of gene expression
Q34157686Opinion: Interpretation of the complexity of innate immune responses by functional genomics.
Q30749830Options available--from start to finish--for obtaining data from DNA microarrays II.
Q95810910Oral cancer research in the new millennium
Q39737487Origin of endothelial progenitors in human postnatal bone marrow
Q30479714Orthogonal projections to latent structures as a strategy for microarray data normalization
Q77078785Over-expression of FoxM1 stimulates cyclin B1 expression
Q30840989Overview of nucleic acid arrays
Q45977949P38 MAP kinase mediates transforming growth factor-beta2 transcription in human keloid fibroblasts.
Q35605939PI3K signaling and miRNA expression during the response of quiescent human fibroblasts to distinct proliferative stimuli
Q78733861Partitioning large-sample microarray-based gene expression profiles using principal components analysis
Q33611023Pattern recognition and arrays: the times are a-changing
Q74724038Patterning DNA on microm scale on mica
Q33847385Perimysial fibroblasts of extraocular muscle, as unique as the muscle fibers
Q81885312Pharmacogenomics
Q36596722Pharmacogenomics of beta2-agonist: key focus on signaling pathways
Q33821420Pharmacogenomics. Interview by Clare Thompson
Q28210286Pharmacogenomics: the promise of personalized medicine
Q41100382Phosphorylation Regulates Id2 Degradation and Mediates the Proliferation of Neural Precursor Cells
Q34038817Phosphorylation of extracellular matrix tenascin-X detected by differential mass tagging followed by nanoLC-MALDI-TOF/TOF-MS/MS using ProteinPilot software
Q28216425Physical and functional interaction between myeloid cell leukemia 1 protein (MCL1) and Fortilin. The potential role of MCL1 as a fortilin chaperone
Q34142489Plasticity and reprogramming of differentiated cells in amphibian regeneration
Q38332370Platelet-derived growth factor stimulates Src-dependent mRNA stabilization of specific early genes in fibroblasts
Q40762903Polypeptide growth factors and phorbol ester induce progressive ankylosis (ank) gene expression in murine and human fibroblasts
Q40481090Posttranscriptional suppression of interleukin-6 production by human cytomegalovirus.
Q27009231Potential role of nonstatin cholesterol lowering agents
Q34728586Practical approaches to long oligonucleotide-based DNA microarray: lessons from herpesviruses
Q33432690Pre-micro RNA signatures delineate stages of endothelial cell transformation in Kaposi sarcoma.
Q29618689Precision and functional specificity in mRNA decay
Q35605850Predicting a local recurrence after breast-conserving therapy by gene expression profiling
Q36176162Predicting gene expression from sequence: a reexamination
Q38522841Predicting gene ontology biological process from temporal gene expression patterns.
Q33407801Principal component tests: applied to temporal gene expression data
Q34398112Profiling brain transcription: neurons learn a lesson from yeast
Q24813217Progress in the application of DNA microarrays
Q46563385Proliferation of fibroblasts cultured from normal gingiva and hereditary gingival fibromatosis is dependent on fatty acid synthase activity
Q47587670Promoter structure and cell cycle dependent expression of the human methylpurine-DNA glycosylase gene
Q34113078Prospect of a stanniocalcin endocrine/paracrine system in mammals
Q46840859Protein kinase CK2 in gene control at cell cycle entry
Q24316321Proteome analysis of the human mitotic spindle
Q28650498Proteomic analysis of the response to cell cycle arrests in human myeloid leukemia cells
Q31010933Proteomic detection of changes in protein synthesis induced by NGX6 transfected in human nasopharyngeal carcinoma cells
Q34092071Proteomics: new perspectives, new biomedical opportunities
Q34280588Quantitative analysis of mRNA amplification by in vitro transcription.
Q33199745Quantitative analysis of the cardiac fibroblast transcriptome-implications for NO/cGMP signaling.
Q31892738Quantitative expression profile of androgen-regulated genes in prostate cancer cells and identification of prostate-specific genes
Q40550748Quantitative proteomic and transcriptional analysis of the response to the p38 mitogen-activated protein kinase inhibitor SB203580 in transformed follicular lymphoma cells.
Q34479334Quiescent fibroblasts are more active in mounting robust inflammatory responses than proliferative fibroblasts
Q33737849Quiescent fibroblasts exhibit high metabolic activity.
Q33650971REDUS: Finding Reducible Subspaces in High Dimensional Data
Q42826566RFX1 mediates the serum-induced immediate early response of Id2 gene expression
Q85241229RNA and DNA Microarrays
Q37509326RNA expression microarrays (REMs), a high-throughput method to measure differences in gene expression in diverse biological samples
Q43109352RNA isolation from mouse pancreas: a ribonuclease-rich tissue
Q30953741RaSH, a rapid subtraction hybridization approach for identifying and cloning differentially expressed genes
Q54748866Rapid and preferential induction of ATF3 transcription in response to low doses of UVA light
Q44324572Reactive nitrogen species block cell cycle re-entry through sustained production of hydrogen peroxide
Q38986390Reactive oxygen species and bacterial biofilms in diabetic wound healing
Q34292412Real-time and quantitative PCR: applications to mechanism-based toxicology.
Q30653098Recursive partitioning for tumor classification with gene expression microarray data
Q24678617Regeneration as an evolutionary variable
Q33904664Regeneration in the metazoans: why does it happen?
Q35062979Regulating the angiogenic balance in tissues
Q35553244Regulation of Axolotl (Ambystoma mexicanum) Limb Blastema Cell Proliferation by Nerves and BMP2 in Organotypic Slice Culture
Q38297752Regulation of CSF1 promoter by the SWI/SNF-like BAF complex
Q31833429Regulation of a multigenic invasion programme by the transcription factor, AP-1: re-expression of a down-regulated gene, TSC-36, inhibits invasion
Q28138082Regulation of apoptosis and cell cycle progression by MCL1. Differential role of proliferating cell nuclear antigen
Q34862346Regulation of monocyte gene expression by the extracellular matrix and its functional implications
Q38054735Regulation of the g1/s transition in hepatocytes: involvement of the cyclin-dependent kinase cdk1 in the DNA replication
Q33653398Regulatory elements and expression profiles
Q28575334Rem2, a new member of the Rem/Rad/Gem/Kir family of Ras-related GTPases
Q33645251Replication-induced protein synthesis and its importance to proteomics
Q28679172Repression of gene expression by oxidative stress
Q30940006Repression of the human adenine nucleotide translocase-2 gene in growth-arrested human diploid cells: the role of nuclear factor-1.
Q53950418Response of rat muscle to acute resistance exercise defined by transcriptional and translational profiling.
Q40260947Responses of the human airway epithelium transcriptome to in vivo injury.
Q38299703Role for E2F in control of both DNA replication and mitotic functions as revealed from DNA microarray analysis
Q64094059Role of Fibroblast Populations in Periodontal Wound Healing and Tissue Remodeling
Q38346740Role of the AKT pathway in microRNA expression of human U251 glioblastoma cells
Q37188103Roles of P21-activated kinases and associated proteins in epithelial wound healing
Q34691253SERPINE1 (PAI-1) is a prominent member of the early G0 --> G1 transition "wound repair" transcriptome in p53 mutant human keratinocytes
Q34767246SERPINE1 (PAI-1) is deposited into keratinocyte migration "trails" and required for optimal monolayer wound repair
Q42409255SERPINE1: A Molecular Switch in the Proliferation-Migration Dichotomy in Wound-"Activated" Keratinocytes
Q28728961SKINOMICS: Transcriptional Profiling in Dermatology and Skin Biology
Q28207089SREBP-2 and NF-Y are involved in the transcriptional regulation of squalene epoxidase
Q57245623STARTing to recycle
Q30662715Screening from a subtracted embryonic chick hindbrain cDNA library: identification of genes expressed during hindbrain, midbrain and cranial neural crest development
Q31154735Semiparametric clustering method for microarray data analysis
Q33762391Senescent fibroblasts promote neoplastic transformation of partially transformed ovarian epithelial cells in a three-dimensional model of early stage ovarian cancer
Q37402268Serum availability affects expression of common house-keeping genes in colon adenocarcinoma cell lines: implications for quantitative real-time PCR studies
Q37228771Serum from humans on long-term calorie restriction enhances stress resistance in cell culture
Q24338662Serum response factor binding sites differ in three human cell types
Q40958397Serum-stimulated cell cycle entry of fibroblasts requires undisturbed phosphorylation and non-phosphorylation interactions of the catalytic subunits of protein kinase CK2.
Q33669313Signaling networks--do all roads lead to the same genes?
Q45415224Signature patterns revealed by microarray analyses of mice infected with influenza virus A and Streptococcus pneumoniae
Q34012310Silencing of Wnt signaling and activation of multiple metabolic pathways in response to thyroid hormone-stimulated cell proliferation
Q64967803Silencing of caveolin-1 in fibroblasts as opposed to epithelial tumor cells results in increased tumor growth rate and chemoresistance in a human pancreatic cancer model.
Q40887262Similar but distinct effects of the tristetraprolin/TIS11 immediate-early proteins on cell survival
Q38302126Similarity and variation in gene expression among human cerebral cortical subregions revealed by DNA macroarrays: technical consideration of RNA expression profiling from postmortem samples
Q38154933Skinomics: past, present and future for diagnostic microarray studies in dermatology
Q47786011Small diameter vascular graft with fibroblast cells and electrospun poly (L-lactide-co-ε-caprolactone) scaffolds: Cell Matrix Engineering
Q44537514Sonographically guided patellar tendon fenestration: prognostic value of preprocedure sonographic findings
Q39564371Sp1 is a transcription repressor to stanniocalcin-1 expression in TSA-treated human colon cancer cells, HT29.
Q38523146Spermatozoal RNA profiles of normal fertile men.
Q55115731Spotlight on…Giulio Superti-Furga
Q51998065Stability-based validation of clustering solutions.
Q51734443Stanniocalcin-1 acts in a negative feedback loop in the prosurvival ERK1/2 signaling pathway during oxidative stress.
Q24306478Stanniocalcin-1 regulates endothelial gene expression and modulates transendothelial migration of leukocytes
Q37362943Stanniocalcin-1 suppresses superoxide generation in macrophages through induction of mitochondrial UCP2
Q36023733Staying alive: metabolic adaptations to quiescence
Q38706429Stem Cell Lineage Infidelity Drives Wound Repair and Cancer.
Q34326862Stem cell dogmas in the genomics era.
Q22254164Stem-loop binding protein, the protein that binds the 3' end of histone mRNA, is cell cycle regulated by both translational and posttranslational mechanisms
Q28572315Stress response gene ATF3 is a target of c-myc in serum-induced cell proliferation
Q33663923Stroma in breast development and disease.
Q33330931Stromal gene expression predicts clinical outcome in breast cancer
Q35788157Stromal-cell derived factor is expressed by dendritic cells and endothelium in human skin
Q44277600Studies of the cell cycle of in vitro cultured skin fibroblasts in goats: work in progress
Q36964122Substance P induces inflammatory responses involving NF-κB in genetically diabetic mice skin fibroblasts co-cultured with macrophages
Q30809155Subsystem identification through dimensionality reduction of large-scale gene expression data
Q43975749Sulfur sparing in the yeast proteome in response to sulfur demand.
Q37663656Super-resolution microscopy reveals decondensed chromatin structure at transcription sites
Q39094256Survival in Quiescence Requires the Euchromatic Deployment of Clr4/SUV39H by Argonaute-Associated Small RNAs
Q91626078Suspension Processing of Microporous Metal-Organic Frameworks: A Scalable Route to High-Quality Adsorbents
Q33790714Synexpression groups in eukaryotes
Q28145747Systematic variation in gene expression patterns in human cancer cell lines
Q34064732Systems analysis of ATF3 in stress response and cancer reveals opposing effects on pro-apoptotic genes in p53 pathway.
Q41671443Systems properties of the Haemophilus influenzae Rd metabolic genotype
Q28264828T lymphocyte activation gene identification by coregulated expression on DNA microarrays
Q39580844TOGA analysis of gene expression to accelerate target development
Q40958107Targeted Inhibition of PAI-1 Activity Impairs Epithelial Migration and Wound Closure Following Cutaneous Injury
Q30441517Targeted comparative RNA interference analysis reveals differential requirement of genes essential for cell proliferation
Q46887392Targeting of Sp1 transcription factor: a novel therapeutic approach for keloids, an in vitro analysis
Q38297247Temporal Dissection of Rate Limiting Transcriptional Events Using Pol II ChIP and RNA Analysis of Adrenergic Stress Gene Activation.
Q35804532Temporal genetic program following B-cell receptor cross-linking: altered balance between proliferation and death in healthy and malignant B cells
Q34117504The "chip" as a specific genetic tool
Q24681487The Fn14 immediate-early response gene is induced during liver regeneration and highly expressed in both human and murine hepatocellular carcinomas
Q28210466The G(2) DNA damage checkpoint delays expression of genes encoding mitotic regulators
Q24298478The GTPase Gem and its partner Kif9 are required for chromosome alignment, spindle length control, and mitotic progression
Q35543803The Genes Encoding Human Protein Kinase CK2 and Their Functional Links
Q56762869The Impact of Genomics on Drug Discovery
Q33656412The Leishmania genome comes of Age.
Q35739162The Mammalian Cell Cycle Regulates Parvovirus Nuclear Capsid Assembly
Q34818240The Nek2 protein kinase: a novel regulator of centrosome structure
Q36061535The Ras-MAPK signal transduction pathway, cancer and chromatin remodeling
Q37135363The TWEAK-Fn14 cytokine-receptor axis: discovery, biology and therapeutic targeting
Q33874404The Wilms tumor suppressor WT1 encodes a transcriptional activator of amphiregulin
Q33883713The application of DNA microarrays in gene expression analysis.
Q34052832The basic helix-loop-helix/leucine zipper transcription factor USF2 integrates serum-induced PAI-1 expression and keratinocyte growth
Q73256426The book of genes
Q37013896The c-myc promoter: still MysterY and challenge
Q24805407The construction and use of bacterial DNA microarrays based on an optimized two-stage PCR strategy
Q30327381The current excitement in bioinformatics-analysis of whole-genome expression data: how does it relate to protein structure and function?
Q77368785The expression of genes induced in melanocytes by exposure to 365-nm UVA: study by cDNA arrays and real-time quantitative RT-PCR
Q34071882The future of obesity research
Q34646667The genetics of the E2F family of transcription factors: shared functions and unique roles
Q28576379The growth factor midkine is modulated by both glucocorticoid and retinoid in fetal lung development
Q24651216The incredible shrinking world of DNA microarrays
Q34995975The induction of activating transcription factor 3 (ATF3) contributes to anti-cancer activity of Abeliophyllum distichum Nakai in human colorectal cancer cells
Q24633454The matricellular protein CCN1 induces fibroblast senescence and restricts fibrosis in cutaneous wound healing
Q24646324The miR-17-5p microRNA is a key regulator of the G1/S phase cell cycle transition
Q53126692The molecular events involved in oligodendrocyte precursor cell proliferation induced by the conditioned medium from b104 neuroblastoma cells.
Q30779984The nature of collision-induced dissociation processes of doubly protonated peptides: comparative study for the future use of matrix-assisted laser desorption/ionization on a hybrid quadrupole time-of-flight mass spectrometer in proteomics.
Q56441735The new biology: histopathology
Q37635078The path to Crohn's disease: is mucosal pathology a secondary event?
Q43436232The role of stem cell factor and c-KIT in keloid pathogenesis: do tyrosine kinase inhibitors have a potential therapeutic role?
Q30653535The sharing of cDNA microarray data
Q37415953The stability of mRNA influences the temporal order of the induction of genes encoding inflammatory molecules
Q36174649The stimulus-dependent co-localization of serum- and glucocorticoid-regulated protein kinase (Sgk) and Erk/MAPK in mammary tumor cells involves the mutual interaction with the importin-alpha nuclear import protein
Q35175821The transcriptional profile of early to middle sporulation in Bacillus subtilis.
Q33824694The twentieth century trajectory of plant biology
Q28594548The ubiquitin ligase component Siah1a is required for completion of meiosis I in male mice
Q40779122The use of genomics technology to investigate gene expression changes in cultured human liver cells
Q24795297Three-parameter lognormal distribution ubiquitously found in cDNA microarray data and its application to parametric data treatment
Q33872717Thrombin regulates S-phase re-entry by cultured newt myotubes
Q34124657Tight Skin 2 Mice Exhibit Delayed Wound Healing Caused by Increased Elastic Fibers in Fibrotic Skin
Q42114458Time Course Expression Analysis of 1[2-cyano-3,12-dioxooleana-1,9(11)-dien-28-oyl]imidazole Induction of Cytoprotection in Human Endothelial Cells
Q31805214Tissue gene expression analysis using arrayed normalized cDNA libraries
Q45091970Tissue-specific expression of the transcriptionally regulated serum and glucocorticoid-inducible protein kinase (Sgk) during mouse embryogenesis
Q42084460Tolerance of glycosylphosphatidylinositol (GPI)-specific phospholipase D overexpression by Chinese hamster ovary cell mutants with aberrant GPI biosynthesis
Q31031029Toward a functional annotation of the human genome using artificial transcription factors
Q35220739Towards a holistic, yet gene-centered analysis of gene expression profiles: a case study of human lung cancers
Q33510472Towards a systems biology approach to mammalian cell cycle: modeling the entrance into S phase of quiescent fibroblasts after serum stimulation
Q38817065Tracking disease progression by searching paths in a temporal network of biological processes
Q34526922Transcript array analysis in rheumatology
Q34845075Transcription factor binding profiles reveal cyclic expression of human protein-coding genes and non-coding RNAs.
Q36684732Transcription profiling during the cell cycle shows that a subset of Polycomb-targeted genes is upregulated during DNA replication
Q57372562Transcriptional Signature of Epidermal Keratinocytes Subjected toin VitroScratch Wounding Reveals Selective Roles for ERK1/2, p38, and Phosphatidylinositol 3-Kinase Signaling Pathways
Q34153744Transcriptional activation of the human stress-inducible transcriptional repressor ATF3 gene promoter by p53.
Q37262209Transcriptional analysis of the Candida albicans cell cycle
Q43903337Transcriptional and physiological responses of HepG2 cells exposed to diethyl maleate: time course analysis
Q44830436Transcriptional basis of KRAS oncogene-mediated cellular transformation in ovarian epithelial cells
Q39446596Transcriptional elements involved in the repression of ribosomal protein synthesis
Q33763939Transcriptional networks and cellular senescence in human mammary fibroblasts
Q24648756Transcriptional profiling of Krüppel-like factor 4 reveals a function in cell cycle regulation and epithelial differentiation
Q51583148Transcriptional profiling of batch and fed-batch protein-free 293-HEK cultures.
Q24802648Transcriptional programs activated by exposure of human prostate cancer cells to androgen
Q43515454Transcriptional regulation and function during the human cell cycle
Q40715817Transcriptional regulation during p21WAF1/CIP1-induced apoptosis in human ovarian cancer cells
Q27939633Transcriptional response of Saccharomyces cerevisiae to DNA-damaging agents does not identify the genes that protect against these agents
Q33287341Transcriptome changes and cAMP oscillations in an archaeal cell cycle
Q35978565Transcriptomic and Functional Pathway Analysis of Human Cervical Carcinoma Cancer Cells Response to Microtubule Inhibitor
Q37184842Transient phosphorylation of tumor associated microtubule associated protein (TMAP)/cytoskeleton associated protein 2 (CKAP2) at Thr-596 during early phases of mitosis
Q39792138Transient recruitment of the hnRNP K protein to inducibly transcribed gene loci
Q34023861Transplant atherosclerosis: role of phenotypic modulation of vascular smooth muscle by nitric oxide
Q35000817Two phases of mitogenic signaling unveil roles for p53 and EGR1 in elimination of inconsistent growth signals
Q38292596Two thyroid hormone-mediated gene expression patterns in vivo identified by cDNA expression arrays in rat.
Q30662800Two-dimensional gel electrophoresis: a powerful method to elucidate cellular responses to toxic compounds
Q38516125Two-step, extensive alterations in the transcriptome from G0 arrest to cell division in Schizosaccharomyces pombe
Q30955253Two-transcript gene expression classifiers in the diagnosis and prognosis of human diseases
Q24300065UBE2T is the E2 in the Fanconi anemia pathway and undergoes negative autoregulation
Q35854990Ultradian oscillations of Stat, Smad, and Hes1 expression in response to serum.
Q34968770Understanding inner ear development with gene expression profiling.
Q52163301Universal GFP reporter for the study of vascular development.
Q30698376Use of cDNA microarrays to analyze dioxin-induced changes in human liver gene expression
Q33864993Use of cDNA microarrays to probe and understand the toxicological consequences of altered gene expression
Q33180799Use of serial analysis of gene expression to generate kidney expression libraries
Q31974416Use of simplified transcriptors for the analysis of gene expression profiles in laser-microdissected cell populations
Q34040063Using DNA microarrays to study host-microbe interactions
Q43633753Using bioinformatics in gene and drug discovery
Q36105235Using in vitro models for expression profiling studies on ethanol and drugs of abuse.
Q35118723Using multi-instance hierarchical clustering learning system to predict yeast gene function
Q46127772Utilization of urea and expression profiles of related genes in the dinoflagellate Prorocentrum donghaiense
Q40685987Validated genomic approach to study differentially expressed genes in complex tissues.
Q35670324Variation in gene expression patterns in human gastric cancers
Q43737904Vasoactive factors and growth factors alter vascular smooth muscle cell EC-SOD expression
Q45877976Virogenomics: a novel approach to antiviral drug discovery
Q30744232Visualization and evaluation of clusters for exploratory analysis of gene expression data
Q27939930Whi3, an S. cerevisiae RNA-binding protein, is a component of stress granules that regulates levels of its target mRNAs
Q24804052Whither genomics?
Q34282441Whole-genome expression analysis: challenges beyond clustering
Q36265342Widespread changes in mRNA stability contribute to quiescence-specific gene expression patterns in a fibroblast model of quiescence.
Q24805609Wound healing and inflammation genes revealed by array analysis of 'macrophageless' PU.1 null mice
Q37591028Wound repair at a glance
Q24681478X chromosome cDNA microarray screening identifies a functional PLP2 promoter polymorphism enriched in patients with X-linked mental retardation
Q22122481X-inactivation profile reveals extensive variability in X-linked gene expression in females
Q27321434bFGF Regulates PI3-Kinase-Rac1-JNK Pathway and Promotes Fibroblast Migration in Wound Healing
Q33958488c-Myc regulates cyclin D-Cdk4 and -Cdk6 activity but affects cell cycle progression at multiple independent points
Q40812472cDNA array analyses of K-ras-induced gene transcription
Q50285054cDNA microarray analysis of differential gene expression in gastric cancer cells sensitive and resistant to 5-fluorouracil and cisplatin.
Q35555211cDNA microarray technology and its applications
Q40822585mRNA expression profile of a human cancer cell line in response to Ginkgo biloba extract: induction of antioxidant response and the Golgi system
Q53559277mTOR as a potential therapeutic target for treatment of keloids and excessive scars.
Q47287168miR-498 promotes cell proliferation and inhibits cell apoptosis in retinoblastoma by directly targeting CCPG1.
Q34182655pcaGoPromoter--an R package for biological and regulatory interpretation of principal components in genome-wide gene expression data

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