Molecular characterization of the gallate dioxygenase from Pseudomonas putida KT2440. The prototype of a new subgroup of extradiol dioxygenases

scientific journal article

Molecular characterization of the gallate dioxygenase from Pseudomonas putida KT2440. The prototype of a new subgroup of extradiol dioxygenases is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1074/JBC.M502585200
P3181OpenCitations bibliographic resource ID2977360
P698PubMed publication ID16030014
P5875ResearchGate publication ID7715010

P2093author name stringJesús Jiménez-Barbero
Angeles Canales
Eduardo Díaz
José Luis García
Juan Nogales
P2860cites workDNA sequencing with chain-terminating inhibitorsQ22066207
Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440Q22121951
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choiceQ24286950
SWISS-MODEL: An automated protein homology-modeling serverQ24672647
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye bindingQ25938984
Basic local alignment search toolQ25938991
Crystal structure of an aromatic ring opening dioxygenase LigAB, a protocatechuate 4,5-dioxygenase, under aerobic conditionsQ27619532
A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequencesQ27860580
Size-Distribution Analysis of Macromolecules by Sedimentation Velocity Ultracentrifugation and Lamm Equation ModelingQ27860847
Purification and properties of 2-pyrone-4,6-dicarboxylate hydrolaseQ28274765
Molecular cloning of the protocatechuate 4,5-dioxygenase genes of Pseudomonas paucimobilisQ28330942
The 4-oxalomesaconate hydratase gene, involved in the protocatechuate 4,5-cleavage pathway, is essential to vanillate and syringate degradation in Sphingomonas paucimobilis SYK-6Q28344977
Plasmid-encoded phthalate catabolic pathway in Arthrobacter keyseri 12BQ28365779
The homogentisate pathway: a central catabolic pathway involved in the degradation of L-phenylalanine, L-tyrosine, and 3-hydroxyphenylacetate in Pseudomonas putidaQ29346848
Small mobilizable multi-purpose cloning vectors derived from the Escherichia coli plasmids pK18 and pK19: selection of defined deletions in the chromosome of Corynebacterium glutamicumQ29615259
The bzd gene cluster, coding for anaerobic benzoate catabolism, in Azoarcus sp. strain CIBQ30399637
Purification and characterization of protocatechuate 2,3-dioxygenase from Bacillus macerans: a new extradiol catecholic dioxygenaseQ36103099
Molecular and functional analysis of the TOL plasmid pWWO from Pseudomonas putida and cloning of genes for the entire regulated aromatic ring meta cleavage pathwayQ36382584
Catechol dioxygenases from Escherichia coli (MhpB) and Alcaligenes eutrophus (MpcI): sequence analysis and biochemical properties of a third family of extradiol dioxygenasesQ36812919
Analysis and construction of stable phenotypes in gram-negative bacteria with Tn5- and Tn10-derived minitransposonsQ40687515
Characterization of the 3-O-methylgallate dioxygenase gene and evidence of multiple 3-O-methylgallate catabolic pathways in Sphingomonas paucimobilis SYK-6.Q41073376
Cloning and characterization of the genes encoding enzymes for the protocatechuate meta-degradation pathway of Pseudomonas ochraceae NGJ1.Q42632301
A novel 2-aminophenol 1,6-dioxygenase involved in the degradation of p-chloronitrobenzene by Comamonas strain CNB-1: purification, properties, genetic cloning and expression in Escherichia coliQ42641963
Novel genes encoding 2-aminophenol 1,6-dioxygenase from Pseudomonas species AP-3 growing on 2-aminophenol and catalytic properties of the purified enzymeQ42657293
Fluorene degradation by Sphingomonas sp. LB126 proceeds through protocatechuic acid: a genetic analysisQ42666429
Comamonas testosteroni BR6020 possesses a single genetic locus for extradiol cleavage of protocatechuateQ43701745
Genomic analysis of the aromatic catabolic pathways from Pseudomonas putida KT2440.Q44282474
Insights into the genomic basis of niche specificity of Pseudomonas putida KT2440.Q45160570
Microbial population genomics and ecology: the road ahead.Q51193549
Specific-purpose plasmid cloning vectors II. Broad host range, high copy number, RSF 1010-derived vectors, and a host-vector system for gene cloning in PseudomonasQ54528042
P433issue42
P407language of work or nameEnglishQ1860
P921main subjectPseudomonas putidaQ2738168
gallate dioxygenase activityQ22282019
P304page(s)35382–35390
P577publication date2005-10-21
P1433published inJournal of Biological ChemistryQ867727
P1476titleMolecular characterization of the gallate dioxygenase from Pseudomonas putida KT2440. The prototype of a new subgroup of extradiol dioxygenases
P478volume280

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cites work (P2860)
Q28756812A genome-scale metabolic reconstruction of Pseudomonas putida KT2440: iJN746 as a cell factory
Q55359470A promiscuous cytochrome P450 aromatic O-demethylase for lignin bioconversion.
Q39084883AromaDeg, a novel database for phylogenomics of aerobic bacterial degradation of aromatics
Q50101369Bacterial catabolism of lignin-derived aromatics: New findings in a recent decade: Update on bacterial lignin catabolism
Q28659011Characterizing the promiscuity of LigAB, a lignin catabolite degrading extradiol dioxygenase from Sphingomonas paucimobilis SYK-6
Q36458279Crystal structure of 3-hydroxyanthranilic acid 3,4-dioxygenase from Saccharomyces cerevisiae: a special subgroup of the type III extradiol dioxygenases
Q24644289Deciphering the genetic determinants for aerobic nicotinic acid degradation: the nic cluster from Pseudomonas putida KT2440
Q43772826Draft whole genome sequence of the cyanide-degrading bacterium Pseudomonas pseudoalcaligenes CECT5344.
Q35929020Functional Metagenomics of a Biostimulated Petroleum-Contaminated Soil Reveals an Extraordinary Diversity of Extradiol Dioxygenases.
Q34057523Genomic analysis of the potential for aromatic compounds biodegradation in Burkholderiales
Q39897544Global regulation of food supply by Pseudomonas putida DOT-T1E
Q36163775Investigation into the Mode of Phosphate Activation in the 4-Hydroxy-4-Methyl-2-Oxoglutarate/4-Carboxy-4-Hydroxy-2-Oxoadipate Aldolase from Pseudomonas putida F1.
Q33477962Metagenomics reveals diversity and abundance of meta-cleavage pathways in microbial communities from soil highly contaminated with jet fuel under air-sparging bioremediation
Q57935539Phenotypic knockouts of selected metabolic pathways by targeting enzymes with camel-derived nanobodies (V HH s)
Q36755092Structural and Kinetic Characterization of the 4-Carboxy-2-hydroxymuconate Hydratase from the Gallate and Protocatechuate 4,5-Cleavage Pathways of Pseudomonas putida KT2440.
Q36539821The ins and outs of ring-cleaving dioxygenases.
Q39969726The revisited genome of Pseudomonas putida KT2440 enlightens its value as a robust metabolic chassis
Q24656257Uncovering the protocatechuate 2,3-cleavage pathway genes
Q28497353Unravelling the gallic acid degradation pathway in bacteria: the gal cluster from Pseudomonas putida

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