| scholarly article | Q13442814 |
| P356 | DOI | 10.1016/S0969-2126(99)80122-1 |
| P698 | PubMed publication ID | 10467151 |
| P2093 | author name string | M Fukuda | |
| Y Mitsui | |||
| E Masai | |||
| K Sugimoto | |||
| T Senda | |||
| H Aoshima | |||
| P2860 | cites work | Structure of protocatechuate 3,4-dioxygenase from Pseudomonas aeruginosa at 2.15 A resolution | Q27730790 |
| Three-dimensional structures of free form and two substrate complexes of an extradiol ring-cleavage type dioxygenase, the BphC enzyme from Pseudomonas sp. strain KKS102 | Q27732711 | ||
| Structures of competitive inhibitor complexes of protocatechuate 3,4-dioxygenase: multiple exogenous ligand binding orientations within the active site | Q27741647 | ||
| Crystal structures of substrate and substrate analog complexes of protocatechuate 3,4-dioxygenase: endogenous Fe3+ ligand displacement in response to substrate binding | Q27741668 | ||
| Crystal structure and resonance Raman studies of protocatechuate 3,4-dioxygenase complexed with 3,4-dihydroxyphenylacetate | Q27743339 | ||
| The axial tyrosinate Fe3+ ligand in protocatechuate 3,4-dioxygenase influences substrate binding and product release: evidence for new reaction cycle intermediates | Q27748882 | ||
| Raster3D Version 2.0. A program for photorealistic molecular graphics | Q27860485 | ||
| SCOP: a structural classification of proteins database for the investigation of sequences and structures | Q27860689 | ||
| Free R value: a novel statistical quantity for assessing the accuracy of crystal structures | Q27860894 | ||
| Automated refinement of protein models | Q27860928 | ||
| Refinement of macromolecular structures by the maximum-likelihood method | Q27861011 | ||
| The CCP4 suite: programs for protein crystallography | Q27861090 | ||
| Molecular cloning of the protocatechuate 4,5-dioxygenase genes of Pseudomonas paucimobilis | Q28330942 | ||
| Conformation of Polypeptides and Proteins | Q29617878 | ||
| Structure and assembly of protocatechuate 3,4-dioxygenase | Q30196085 | ||
| Functional and evolutionary relationships among diverse oxygenases | Q33972461 | ||
| Evolutionary relationships among extradiol dioxygenases | Q35614251 | ||
| A 3-(3-hydroxyphenyl)propionic acid catabolic pathway in Rhodococcus globerulus PWD1: cloning and characterization of the hpp operon | Q35631054 | ||
| Catechol dioxygenases from Escherichia coli (MhpB) and Alcaligenes eutrophus (MpcI): sequence analysis and biochemical properties of a third family of extradiol dioxygenases | Q36812919 | ||
| Identification and characterization of genes encoding carbazole 1,9a-dioxygenase in Pseudomonas sp. strain CA10. | Q39846665 | ||
| Nucleotide sequence of metapyrocatechase I (catechol 2,3-oxygenase I) gene mpcI from Alcaligenes eutrophus JMP222. | Q40517338 | ||
| Homoprotocatechuate 2,3-dioxygenase from Brevibacterium fuscum. A dioxygenase with catalase activity. | Q52308271 | ||
| X-ray absorption spectroscopic studies of the Fe(II) active site of catechol 2,3-dioxygenase. Implications for the extradiol cleavage mechanism | Q57943724 | ||
| PROCHECK: a program to check the stereochemical quality of protein structures | Q26778411 | ||
| MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures | Q26778412 | ||
| Processing of X-ray diffraction data collected in oscillation mode | Q26778468 | ||
| An archetypical extradiol-cleaving catecholic dioxygenase: the crystal structure of catechol 2,3-dioxygenase (metapyrocatechase) from Ppseudomonas putida mt-2 | Q27618597 | ||
| Crystal structure of the biphenyl-cleaving extradiol dioxygenase from a PCB-degrading pseudomonad | Q27729302 | ||
| P433 | issue | 8 | |
| P921 | main subject | crystal structure | Q895901 |
| P304 | page(s) | 953-65 | |
| P577 | publication date | 1999-08-15 | |
| P1433 | published in | Structure | Q15709970 |
| P1476 | title | Crystal structure of an aromatic ring opening dioxygenase LigAB, a protocatechuate 4,5-dioxygenase, under aerobic conditions | |
| P478 | volume | 7 |
| Q51009573 | A novel feature extraction scheme for prediction of protein-protein interaction sites. |
| Q38194935 | A two-electron-shell game: intermediates of the extradiol-cleaving catechol dioxygenases |
| Q39084883 | AromaDeg, a novel database for phylogenomics of aerobic bacterial degradation of aromatics |
| Q50101369 | Bacterial catabolism of lignin-derived aromatics: New findings in a recent decade: Update on bacterial lignin catabolism |
| Q36256230 | Bacterial degradation of phthalate isomers and their esters |
| Q28208239 | Biodegradation of aromatic compounds by Escherichia coli |
| Q50436595 | Biomimetic iron(III) complexes of N3O and N3O2 donor ligands: protonation of coordinated ethanolate donor enhances dioxygenase activity |
| Q46916110 | Biomimetic iron(III) complexes of facially and meridionally coordinating tridentate 3N ligands: tuning of regioselective extradiol dioxygenase activity in organized assemblies |
| Q53089159 | Catalytic and regiospecific extradiol cleavage of catechol by a biomimetic iron complex. |
| Q33196907 | Characterization and functional identification of a novel plant 4,5-extradiol dioxygenase involved in betalain pigment biosynthesis in Portulaca grandiflora |
| Q41073376 | Characterization of the 3-O-methylgallate dioxygenase gene and evidence of multiple 3-O-methylgallate catabolic pathways in Sphingomonas paucimobilis SYK-6. |
| Q39702846 | Characterization of the 4-carboxy-4-hydroxy-2-oxoadipate aldolase gene and operon structure of the protocatechuate 4,5-cleavage pathway genes in Sphingomonas paucimobilis SYK-6. |
| Q39640559 | Characterization of the 5-carboxyvanillate decarboxylase gene and its role in lignin-related biphenyl catabolism in Sphingomonas paucimobilis SYK-6. |
| Q41835059 | Characterization of the gallate dioxygenase gene: three distinct ring cleavage dioxygenases are involved in syringate degradation by Sphingomonas paucimobilis SYK-6. |
| Q28659011 | Characterizing the promiscuity of LigAB, a lignin catabolite degrading extradiol dioxygenase from Sphingomonas paucimobilis SYK-6 |
| Q51291151 | Crystal structure of the TK2203 protein from Thermococcus kodakarensis, a putative extradiol dioxygenase. |
| Q27639570 | Crystal structures of the reaction intermediate and its homologue of an extradiol-cleaving catecholic dioxygenase |
| Q36448209 | Crystallization and preliminary crystallographic analysis of 2-aminophenol 1,6-dioxygenase complexed with substrate and with an inhibitor |
| Q37420359 | Crystallization and preliminary crystallographic analysis of gallate dioxygenase DesB from Sphingobium sp. SYK-6. |
| Q37096285 | Crystallographic comparison of manganese- and iron-dependent homoprotocatechuate 2,3-dioxygenases |
| Q56532352 | Dioxygenase enzymes: catalytic mechanisms and chemical models |
| Q53592684 | Directed evolution of a non-heme-iron-dependent extradiol catechol dioxygenase: identification of mutants with intradiol oxidative cleavage activity. |
| Q46759749 | Diversity of 2,3-dihydroxybiphenyl dioxygenase genes in a strong PCB degrader, Rhodococcus sp. strain RHA1. |
| Q41341210 | Elucidation of the 4-hydroxyacetophenone catabolic pathway in Pseudomonas fluorescens ACB. |
| Q34716149 | Escherichia coli protein YgiD produces the structural unit of plant pigments betalains: characterization of a prokaryotic enzyme with DOPA-extradiol-dioxygenase activity |
| Q35929020 | Functional Metagenomics of a Biostimulated Petroleum-Contaminated Soil Reveals an Extraordinary Diversity of Extradiol Dioxygenases. |
| Q24524220 | Genetic and biochemical characterization of 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase and its role in the protocatechuate 4,5-cleavage pathway in Sphingomonas paucimobilis SYK-6 |
| Q24651198 | Hydroquinone dioxygenase from pseudomonas fluorescens ACB: a novel member of the family of nonheme-iron(II)-dependent dioxygenases |
| Q97652798 | Iron acquisition system of Sphingobium sp. strain SYK-6, a degrader of lignin-derived aromatic compounds |
| Q53232358 | Iron(III) complexes of N2O and N3O donor ligands as functional models for catechol dioxygenase enzymes: ether oxygen coordination tunes the regioselectivity and reactivity. |
| Q44738450 | Iron(III) complexes of tripodal tetradentate 4N ligands as functional models for catechol dioxygenases: the electronic vs. steric effect on extradiol cleavage |
| Q27649163 | Memo is homologous to nonheme iron dioxygenases and binds an ErbB2-derived phosphopeptide in its vestigial active site |
| Q33477962 | Metagenomics reveals diversity and abundance of meta-cleavage pathways in microbial communities from soil highly contaminated with jet fuel under air-sparging bioremediation |
| Q28497358 | Molecular characterization of the gallate dioxygenase from Pseudomonas putida KT2440. The prototype of a new subgroup of extradiol dioxygenases |
| Q27682380 | Molecular mechanism of strict substrate specificity of an extradiol dioxygenase, DesB, derived from Sphingobium sp. SYK-6 |
| Q34662093 | Non-heme iron oxygenases |
| Q34386266 | Oxygenases: mechanisms and structural motifs for O(2) activation |
| Q26866201 | Protein design: toward functional metalloenzymes |
| Q45224183 | Protocatechuate 4,5-dioxygenase from Comamonas testosteroni T-2: biochemical and molecular properties of a new subgroup within class III of extradiol dioxygenases |
| Q35568051 | Purification and characterization of hydroquinone dioxygenase from Sphingomonas sp. strain TTNP3 |
| Q51551281 | Purification and partial characterization of the extradiol dioxygenase, 2'-carboxy-2,3-dihydroxybiphenyl 1,2-dioxygenase, in the fluorene degradation pathway from Rhodococcus sp. strain DFA3. |
| Q36021557 | Structural Basis for Substrate and Oxygen Activation in Homoprotocatechuate 2,3-Dioxygenase: Roles of Conserved Active Site Histidine 200 |
| Q27674540 | Structural Basis for the Role of Tyrosine 257 of Homoprotocatechuate 2,3-Dioxygenase in Substrate and Oxygen Activation |
| Q33801835 | Structural and mechanistic studies on 2-oxoglutarate-dependent oxygenases and related enzymes |
| Q27683665 | Structures of aminophenol dioxygenase in complex with intermediate, product and inhibitor |
| Q52871218 | Substrate-dependent aromatic ring fission of catechol and 2-aminophenol with O2 catalyzed by a nonheme iron complex of a tripodal N4 ligand. |
| Q36441965 | Substrate-mediated oxygen activation by homoprotocatechuate 2,3-dioxygenase: intermediates formed by a tyrosine 257 variant. |
| Q46218316 | Synthesis, structure, spectra and reactivity of iron(III) complexes of facially coordinating and sterically hindering 3N ligands as models for catechol dioxygenases |
| Q27622422 | The 1.8 A crystal structure of catechol 1,2-dioxygenase reveals a novel hydrophobic helical zipper as a subunit linker |
| Q33212392 | The 2-His-1-carboxylate facial triad: a versatile platform for dioxygen activation by mononuclear non-heme iron(II) enzymes. |
| Q28344977 | The 4-oxalomesaconate hydratase gene, involved in the protocatechuate 4,5-cleavage pathway, is essential to vanillate and syringate degradation in Sphingomonas paucimobilis SYK-6 |
| Q52712109 | The emerging role for bacteria in lignin degradation and bio-product formation |
| Q36539821 | The ins and outs of ring-cleaving dioxygenases. |
| Q43798555 | The mechanism-based inactivation of 2,3-dihydroxybiphenyl 1,2-dioxygenase by catecholic substrates. |
| Q46746197 | The role of histidine 200 in MndD, the Mn(II)-dependent 3,4-dihydroxyphenylacetate 2,3-dioxygenase from Arthrobacter globiformis CM-2, a site-directed mutagenesis study |
| Q52715064 | Tuning the Regiospecificity of Cleavage in FeIII Catecholate Complexes: Tridentate Facial versus Meridional Ligands. |
| Q24656257 | Uncovering the protocatechuate 2,3-cleavage pathway genes |
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