Genome-Guided Analysis and Whole Transcriptome Profiling of the Mesophilic Syntrophic Acetate Oxidising Bacterium Syntrophaceticus schinkii

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Genome-Guided Analysis and Whole Transcriptome Profiling of the Mesophilic Syntrophic Acetate Oxidising Bacterium Syntrophaceticus schinkii is …
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scholarly articleQ13442814

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P819ADS bibcode2016PLoSO..1166520M
P356DOI10.1371/JOURNAL.PONE.0166520
P932PMC publication ID5113046
P698PubMed publication ID27851830

P50authorErik Bongcam-RudloffQ5388500
P2093author name stringAnna Schnürer
Bettina Müller
Shahid Manzoor
P2860cites workGenome-guided analysis of physiological and morphological traits of the fermentative acetate oxidizer Thermacetogenium phaeumQ21266685
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The genome ofSyntrophorhabdus aromaticivoransstrain UI provides new insights for syntrophic aromatic compound metabolism and electron flowQ59543813
Purification and properties of acetyl-CoA synthetase (ADP-forming), an archaeal enzyme of acetate formation and ATP synthesis, from the hyperthermophile Pyrococcus furiosusQ73268297
Thermacetogenium phaeum gen. nov., sp. nov., a strictly anaerobic, thermophilic, syntrophic acetate-oxidizing bacteriumQ31804151
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Syntrophaceticus schinkii gen. nov., sp. nov., an anaerobic, syntrophic acetate-oxidizing bacterium isolated from a mesophilic anaerobic filter.Q33603594
Operation of the CO dehydrogenase/acetyl coenzyme A pathway in both acetate oxidation and acetate formation by the syntrophically acetate-oxidizing bacterium Thermacetogenium phaeumQ33788356
The trimethylamine methyltransferase gene and multiple dimethylamine methyltransferase genes of Methanosarcina barkeri contain in-frame and read-through amber codonsQ33790170
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Tepidanaerobacter acetatoxydans sp. nov., an anaerobic, syntrophic acetate-oxidizing bacterium isolated from two ammonium-enriched mesophilic methanogenic processes.Q33874972
The quantitative significance of Syntrophaceae and syntrophic partnerships in methanogenic degradation of crude oil alkanesQ34018379
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Clostridium ultunense sp. nov., a mesophilic bacterium oxidizing acetate in syntrophic association with a hydrogenotrophic methanogenic bacteriumQ34402179
The effects of elevated CO2 concentration on competitive interaction between aceticlastic and syntrophic methanogenesis in a model microbial consortiumQ34426293
Novel type of ADP-forming acetyl coenzyme A synthetase in hyperthermophilic archaea: heterologous expression and characterization of isoenzymes from the sulfate reducer Archaeoglobus fulgidus and the methanogen Methanococcus jannaschiiQ34434232
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Occurrence, classification, and biological function of hydrogenases: an overview.Q34699989
Chemosensory signaling systems that control bacterial survivalQ34756654
Carbon dioxide concentration dictates alternative methanogenic pathways in oil reservoirs.Q34768813
Hydrogenotrophic methanogenesis by moderately acid-tolerant methanogens of a methane-emitting acidic peatQ34877438
Genome-guided analysis of physiological capacities of Tepidanaerobacter acetatoxydans provides insights into environmental adaptations and syntrophic acetate oxidationQ35219528
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Ammonia threshold for inhibition of anaerobic digestion of thin stillage and the importance of organic loading rateQ35873574
Microbial dark matter ecogenomics reveals complex synergistic networks in a methanogenic bioreactorQ35880949
Working draft genome sequence of the mesophilic acetate oxidizing bacterium Syntrophaceticus schinkii strain Sp3Q36273953
Amt/MEP/Rh proteins conduct ammoniaQ36307474
Inhibition of anaerobic digestion process: a reviewQ36776451
Quantification of syntrophic acetate-oxidizing microbial communities in biogas processes.Q36860527
The genome of Clostridium kluyveri, a strict anaerobe with unique metabolic features.Q36890927
Energy conservation via electron-transferring flavoprotein in anaerobic bacteriaQ37015121
Type IV pili in Gram-positive bacteria.Q37264187
Complete genome sequence of Methanoculleus bourgensis strain MAB1, the syntrophic partner of mesophilic acetate-oxidising bacteria (SAOB).Q37336843
Draft Genome Sequence of Syntrophorhabdus aromaticivorans Strain UI, a Mesophilic Aromatic Compound-Degrading SyntrophQ37563284
Hydrogenases from methanogenic archaea, nickel, a novel cofactor, and H2 storageQ37710521
Biochemistry, evolution and physiological function of the Rnf complex, a novel ion-motive electron transport complex in prokaryotesQ37808977
Syntrophic acetate-oxidizing microbes in methanogenic environmentsQ37874066
A critical review on inhibition of anaerobic digestion process by excess ammonia.Q38120129
Autotrophy at the thermodynamic limit of life: a model for energy conservation in acetogenic bacteriaQ38266505
A monocarboxylate permease of Rhizobium leguminosarum is the first member of a new subfamily of transportersQ39680420
Effect of medium composition and sludge removal on the production, composition, and architecture of thermophilic (55 degrees C) acetate-utilizing granules from an upflow anaerobic sludge blanket reactorQ39858354
Control of Interspecies Electron Flow during Anaerobic Digestion: Significance of Formate Transfer versus Hydrogen Transfer during Syntrophic Methanogenesis in FlocsQ39918486
Production and Utilization of Ethanol by the Homoacetogen Acetobacterium woodiiQ39921010
Kinetics of Homoacetic Fermentation of Lactate by Clostridium formicoaceticumQ39924589
The gene yjcG, cotranscribed with the gene acs, encodes an acetate permease in Escherichia coli.Q39981919
Reaction mechanism and structural model of ADP-forming Acetyl-CoA synthetase from the hyperthermophilic archaeon Pyrococcus furiosus: evidence for a second active site histidine residueQ40420190
Functional dissection of a conserved motif within the pilus retraction protein PilT.Q40875098
Effect of dilution rate on metabolic pathway shift between aceticlastic and nonaceticlastic methanogenesis in chemostat cultivationQ41031289
A reversible electron-bifurcating ferredoxin- and NAD-dependent [FeFe]-hydrogenase (HydABC) in Moorella thermoaceticaQ41448700
Acetate oxidation is the dominant methanogenic pathway from acetate in the absence of MethanosaetaceaeQ41486476
A bacterial electron-bifurcating hydrogenaseQ41904819
Roles of HynAB and Ech, the only two hydrogenases found in the model sulfate reducer Desulfovibrio gigas.Q42008200
Identification and characterization of a bacterial transport system for the uptake of pyruvate, propionate, and acetate in Corynebacterium glutamicumQ42236121
Function of periplasmic hydrogenases in the sulfate-reducing bacterium Desulfovibrio vulgaris HildenboroughQ42412372
Thermoanaerobacteriaceae oxidize acetate in methanogenic rice field soil at 50°C.Q42726366
Effects of temperature and hydraulic retention time on acetotrophic pathways and performance in high-rate sludge digestionQ43021532
Predominant contribution of syntrophic acetate oxidation to thermophilic methane formation at high acetate concentrationsQ43029967
Syntrophic acetate oxidation under thermophilic methanogenic condition in Chinese paddy field soilQ43030948
First insights into the syntrophic acetate-oxidizing bacteria--a genetic studyQ43238372
Purification and characterization of acetate kinase from acetate-grown Methanosarcina thermophila. Evidence for regulation of synthesisQ45057894
Effect of tungsten and molybdenum on growth of a syntrophic coculture of Syntrophobacter fumaroxidans and Methanospirillum hungateiQ46364767
Ammonia, a selective agent for methane production by syntrophic acetate oxidation at mesophilic temperatureQ46653762
Microbial degradation of selected odorous substancesQ46685453
Involvement of formate as an interspecies electron carrier in a syntrophic acetate-oxidizing anaerobic microorganism in coculture with methanogensQ46759228
Insights into the annotated genome sequence of Methanoculleus bourgensis MS2(T), related to dominant methanogens in biogas-producing plantsQ46805932
Crude-oil biodegradation via methanogenesis in subsurface petroleum reservoirsQ48029129
Isolation and characterization of homogeneous acetate kinase from Salmonella typhimurium and Escherichia coli.Q50202663
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P433issue11
P407language of work or nameEnglishQ1860
P921main subjecttranscriptomeQ252857
P304page(s)e0166520
P577publication date2016-01-01
P1433published inPLOS OneQ564954
P1476titleGenome-Guided Analysis and Whole Transcriptome Profiling of the Mesophilic Syntrophic Acetate Oxidising Bacterium Syntrophaceticus schinkii
P478volume11

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cites work (P2860)
Q64075253Alternative Pathways of Acetogenic Ethanol and Methanol Degradation in the Thermophilic Anaerobe
Q104694005Deep insights into the network of acetate metabolism in anaerobic digestion: focusing on syntrophic acetate oxidation and homoacetogenesis
Q46241471Detection of novel syntrophic acetate-oxidizing bacteria from biogas processes by continuous acetate enrichment approaches.
Q51733127Flavin-Based Electron Bifurcation, Ferredoxin, Flavodoxin, and Anaerobic Respiration With Protons (Ech) or NAD+ (Rnf) as Electron Acceptors: A Historical Review.
Q54994074Genome-Guided Analysis of Clostridium ultunense and Comparative Genomics Reveal Different Strategies for Acetate Oxidation and Energy Conservation in Syntrophic Acetate-Oxidising Bacteria.
Q37726843Genomics and Metagenomics in Microbial Ecology: Recent Advances and Challenges.
Q60961123Metabolism and Occurrence of Methanogenic and Sulfate-Reducing Syntrophic Acetate Oxidizing Communities in Haloalkaline Environments
Q100723076New insight into microbial degradation of mycotoxins during anaerobic digestion
Q97067381Syntrophic acetate oxidation replaces acetoclastic methanogenesis during thermophilic digestion of biowaste
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Q91344756The potential for polyphosphate metabolism in Archaea and anaerobic polyphosphate formation in Methanosarcina mazei

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