ProtTest 3: fast selection of best-fit models of protein evolution

scientific article (publication date: 15 April 2011)

ProtTest 3: fast selection of best-fit models of protein evolution is …
instance of (P31):
scholarly articleQ13442814

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P8978DBLP publication IDjournals/bioinformatics/DarribaTDP11
P356DOI10.1093/BIOINFORMATICS/BTR088
P3181OpenCitations bibliographic resource ID137640
P932PMC publication ID5215816
P698PubMed publication ID21335321
P5875ResearchGate publication ID49849563

P50authorDavid PosadaQ30512250
P2093author name stringDarriba D
Doallo R
Taboada GL
P2860cites workModel selection and model averaging in phylogenetics: advantages of akaike information criterion and bayesian approaches over likelihood ratio testsQ24286948
ProtTest: selection of best-fit models of protein evolutionQ27860845
A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum LikelihoodQ27861000
ALTER: program-oriented conversion of DNA and protein alignmentsQ42739018
PAL: an object-oriented programming library for molecular evolution and phylogenetics.Q55034934
P433issue8
P407language of work or nameEnglishQ1860
P304page(s)1164-5
P577publication date2011-04-15
P1433published inBioinformaticsQ4914910
P1476titleProtTest 3: fast selection of best-fit models of protein evolution
P478volume27

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Q37049525DNA-binding specificity changes in the evolution of forkhead transcription factors
Q35220413Dact genes are chordate specific regulators at the intersection of Wnt and Tgf-β signaling pathways
Q59792598Daily changes in phytoplankton lipidomes reveal mechanisms of energy storage in the open ocean
Q90460695De Novo Assembly Discovered Novel Structures in Genome of Plastids and Revealed Divergent Inverted Repeats in Mammillaria (Cactaceae, Caryophyllales)
Q28829132De Novo Transcriptome Analysis of the Common New Zealand Stick Insect Clitarchus hookeri (Phasmatodea) Reveals Genes Involved in Olfaction, Digestion and Sexual Reproduction
Q38474294De novo characterisation of the greenlip abalone transcriptome (Haliotis laevigata) with a focus on the heat shock protein 70 (HSP70) family.
Q28647736De novo synthesis of a sunscreen compound in vertebrates
Q36280844Decipher the ancestry of the plant-specific LBD gene family
Q57159843Deciphering evolutionary dynamics of SWEET genes in diverse plant lineages
Q91900006Deianiraea, an extracellular bacterium associated with the ciliate Paramecium, suggests an alternative scenario for the evolution of Rickettsiales
Q89228152Delineation of the functional and structural properties of the glutathione transferase family from the plant pathogen Erwinia carotovora
Q106698592Description and Molecular Differentiation of a New Falcaustra (Nematode: Kathlaniidae) from the Indochinese Water Dragon, Physignathus cocincinus (Squamata: Agamidae) in North-Central Vietnam
Q31057284Detection and Diversity of Fungal Nitric Oxide Reductase Genes (p450nor) in Agricultural Soils
Q30394447Determination of antigenicity-altering patches on the major surface protein of human influenza A/H3N2 viruses
Q58106618Development of reverse genetics systems and investigation of host response antagonism and reassortment potential for Cache Valley and Kairi viruses, two emerging orthobunyaviruses of the Americas
Q48003124Developmental gene expression provides clues to relationships between sponge and eumetazoan body plans
Q46891623Developmental variations among Panagrolaimid nematodes indicate developmental system drift within a small taxonomic unit
Q31148609Dhurrin metabolism in the developing grain of Sorghum bicolor (L.) Moench investigated by metabolite profiling and novel clustering analyses of time-resolved transcriptomic data
Q59127048Diet-dependent gene expression highlights the importance of Cytochrome P450 in detoxification of algal secondary metabolites in a marine isopod
Q42672376Differences in the genetic control of early egg development and reproduction between C. elegans and its parthenogenetic relative D. coronatus.
Q36022698Dimerization and Transactivation Domains as Candidates for Functional Modulation and Diversity of Sox9.
Q64072627Discovery and Characterization of Bukakata orbivirus (), a Novel Virus from a Ugandan Bat
Q50956289Discovery and characterization of family 39 glycoside hydrolases from rumen anaerobic fungi with polyspecific activity on rare arabinosyl substrates.
Q34238831Discovery and genomic characterization of a novel bat sapovirus with unusual genomic features and phylogenetic position
Q34043407Discovery and genomic characterization of a novel ovine partetravirus and a new genotype of bovine partetravirus
Q27184685Discovery of a Natural Microsporidian Pathogen with a Broad Tissue Tropism in Caenorhabditis elegans
Q89502964Discovery of a New TLR Gene and Gene Expansion Event through Improved Desert Tortoise Genome Assembly with Chromosome-Scale Scaffolds
Q34977778Discovery of a divergent HPIV4 from respiratory secretions using second and third generation metagenomic sequencing
Q37124866Discovery of catalases in members of the Chlamydiales order
Q36384329Discovery of extremely halophilic, methyl-reducing euryarchaea provides insights into the evolutionary origin of methanogenesis
Q35187816Discovery of novel rhabdoviruses in the blood of healthy individuals from West Africa
Q35791065Divergence and adaptive evolution of the gibberellin oxidase genes in plants
Q56520681Divergence times in demosponges (Porifera): first insights from new mitogenomes and the inclusion of fossils in a birth-death clock model
Q26700385Divergent Viruses Discovered in Arthropods and Vertebrates Revise the Evolutionary History of the Flaviviridae and Related Viruses
Q90585532Divergent evolution and clade-specific duplications of the Insulin-like Receptor in malacostracan crustaceans
Q34461703Divergent mitochondrial respiratory chains in phototrophic relatives of apicomplexan parasites.
Q104693653Diverse Phylogenomic Datasets Uncover a Concordant Scenario of Laurasiatherian Interordinal Relationships
Q104694687Diverse cressdnaviruses and an anellovirus identified in the fecal samples of yellow-bellied marmots
Q41135468Diverse selective regimes shape genetic diversity at ADAR genes and at their coding targets
Q46799313Diversification and distinctive structural features of S-RNase alleles in the genus Solanum
Q34211982Diversification of genes for carotenoid biosynthesis in aphids following an ancient transfer from a fungus
Q38756822Diversity and ecology of and biomineralization by magnetotactic bacteria
Q91744795Diversity and evolution of chitin synthases in oomycetes (Straminipila: Oomycota)
Q50351068Diversity and evolution of four-domain voltage-gated cation channels of eukaryotes and their ancestral functional determinants.
Q35580839Diversity of Viruses Infecting the Green Microalga Ostreococcus lucimarinus
Q43586426Diversity of nitrogen assimilation pathways among microbial photosynthetic eukaryotes
Q60918457Diversity of opisthokont septin proteins reveals structural constraints and conserved motifs
Q100750404Diversity of voltage-gated potassium channels and cyclic nucleotide-binding domain-containing channels in eukaryotes
Q33658635Dm5-HT2B: Pharmacological Characterization of the Fifth Serotonin Receptor Subtype of Drosophila melanogaster
Q30008801Domain Organization and Evolution of the Highly Divergent 5' Coding Region of Genomes of Arteriviruses, Including the Novel Possum Nidovirus
Q52806951Dominant ectosymbiotic bacteria of cellulolytic protists in the termite gut also have the potential to digest lignocellulose.
Q60313460Doublesex Evolution Is Correlated with Social Complexity in Ants
Q37180332Draft Genome of the Scarab Beetle Oryctes borbonicus on La Réunion Island
Q57900833Draft Genomes Shed Light on the Dual Bacterial Symbiosis that Dominates the Microbiome of the Coral Reef Sponge Amphimedon queenslandica
Q33785879Draft genome of the honey bee ectoparasitic mite, Tropilaelaps mercedesae, is shaped by the parasitic life history
Q41192386Draft genome sequence of Acinetobacter sp. neg1 capable of degrading ochratoxin A.
Q38730710Draft genomes of the corallimorpharians Amplexidiscus fenestrafer and Discosoma sp.
Q101226459Driven progressive evolution of genome sequence complexity in Cyanobacteria
Q42320267Duplicate gene divergence by changes in microRNA binding sites in Arabidopsis and Brassica.
Q37738566Duplications and Positive Selection Drive the Evolution of Parasitism-Associated Gene Families in the Nematode Strongyloides papillosus
Q36663956Dynamic evolution of endogenous retrovirus-derived genes expressed in bovine conceptuses during the period of placentation
Q41445767Dynamics of genomic innovation in the unicellular ancestry of animals
Q35763729ERK1 and ERK2 present functional redundancy in tetrapods despite higher evolution rate of ERK1.
Q38620488EVIDENCE OF DIVERSITY, SITE AND HOST SPECIFICITY OF SEA TURTLE BLOOD FLUKES (DIGENEA: SCHISTOSOMATOIDEA: "SPIRORCHIIDAE"): A MOLECULAR PROSPECTING STUDY.
Q35435784Early chordate origin of the vertebrate integrin αI domains
Q41997420Early divergence, broad distribution, and high diversity of animal chitin synthases
Q58840752Early metazoan cell type diversity and the evolution of multicellular gene regulation
Q26801790Ebolavirus comparative genomics
Q90407916Ecological Assembly Processes Are Coordinated between Bacterial and Viral Communities in Fractured Shale Ecosystems
Q83226443Efa6 protects axons and regulates their growth and branching by inhibiting microtubule polymerisation at the cortex
Q64076196Effect of CO Concentration on Uptake and Assimilation of Inorganic Carbon in the Extreme Acidophile
Q91199419Effects of missing data and data type on phylotranscriptomic analysis of stony corals (Cnidaria: Anthozoa: Scleractinia)
Q90496620Elaboration of the corticosteroid synthesis pathway in primates through a multi-step enzyme
Q92082941Emergence and Evolution of ERM Proteins and Merlin in Metazoans
Q55563290Endogenous Stochastic Decoding of the CUG Codon by Competing Ser- and Leu-tRNAs in Ascoidea asiatica.
Q28654560Endogenous hepadnaviruses, bornaviruses and circoviruses in snakes
Q57086720Endosymbiont genomes yield clues of tubeworm success
Q34473164Endosymbiosis undone by stepwise elimination of the plastid in a parasitic dinoflagellate
Q57034311Environmentally-driven gene content convergence and the Bacillus phylogeny
Q34355701Escherichia coli D-malate dehydrogenase, a generalist enzyme active in the leucine biosynthesis pathway
Q93088639Establishment of mesophilic-like catalytic properties in a thermophilic enzyme without affecting its thermal stability
Q42229655Establishment of three new genera in the family Geminiviridae: Becurtovirus, Eragrovirus and Turncurtovirus
Q111629653Evaluating character partitioning and molecular models in plastid phylogenomics at low taxonomic levels: A case study using Amphilophium (Bignonieae, Bignoniaceae)
Q96133680Evidence of Echolocation in the Common Shrew from Molecular Convergence with Other Echolocating Mammals
Q37572006Evidence of an Antimicrobial Peptide Signature Encrypted in HECT E3 Ubiquitin Ligases
Q58078941Evidence of peripheral olfactory impairment in the domestic silkworms: insight from the comparative transcriptome and population genetics
Q33600328Evolution and Expression Patterns of CYC/TB1 Genes in Anacyclus: Phylogenetic Insights for Floral Symmetry Genes in Asteraceae
Q36118572Evolution and Structural Analyses of Glossina morsitans (Diptera; Glossinidae) Tetraspanins.
Q56976033Evolution and diversification of the plant gibberellin receptor GID1
Q34448384Evolution and dynamics of megaplasmids with genome sizes larger than 100 kb in the Bacillus cereus group
Q83227873Evolution of (p)ppGpp-HPRT regulation through diversification of an allosteric oligomeric interaction
Q90217925Evolution of CYCLOIDEA-like genes in Fabales: Insights into duplication patterns and the control of floral symmetry
Q40102415Evolution of DUF1313 family members across plant species and their association with maize photoperiod sensitivity
Q41584235Evolution of Eukaryotic DNA Polymerases via Interaction Between Cells and Large DNA Viruses
Q36297481Evolution of Mycolic Acid Biosynthesis Genes and Their Regulation during Starvation in Mycobacterium tuberculosis
Q87610005Evolution of PAS domains and PAS-containing genes in eukaryotes
Q92732874Evolution of Photorespiratory Glycolate Oxidase among Archaeplastida
Q42278040Evolution of RNA interference proteins dicer and argonaute in Basidiomycota
Q46270401Evolution of Single-Domain Globins in Hydrothermal Vent Scale-Worms.
Q31082497Evolution of Sulfur Binding by Hemoglobin in Siboglinidae (Annelida) with Special Reference to Bone-Eating Worms, Osedax.
Q35769392Evolution of a Novel Antiviral Immune-Signaling Interaction by Partial-Gene Duplication.
Q41252629Evolution of an ancient venom: recognition of a novel family of cnidarian toxins and the common evolutionary origin of sodium and potassium neurotoxins in sea anemone
Q43114543Evolution of animal and plant dicers: early parallel duplications and recurrent adaptation of antiviral RNA binding in plants
Q51426214Evolution of bacterial recombinase A (recA) in eukaryotes explained by addition of genomic data of key microbial lineages.
Q41992246Evolution of conjugation and type IV secretion systems
Q46246641Evolution of cytokinesis-related protein localization during the emergence of multicellularity in volvocine green algae
Q85642974Evolution of general transcription factors
Q36315237Evolution of group I introns in Porifera: new evidence for intron mobility and implications for DNA barcoding
Q33913643Evolution of immune chemoreceptors into sensors of the outside world
Q33902031Evolution of miRNA tailing by 3' terminal uridylyl transferases in Metazoa
Q36799247Evolution of modular intraflagellar transport from a coatomer-like progenitor.
Q34339931Evolution of multipartite mitochondrial genomes in the booklice of the genus Liposcelis (Psocoptera)
Q100569033Evolution of sex hormone binding globulins reveals early gene duplication at the root of vertebrates
Q54986397Evolution of substrate specificity in the Nucleobase-Ascorbate Transporter (NAT) protein family.
Q111629249Evolution of the 4-coumarate:coenzyme A ligase (4CL) gene family: Conserved evolutionary pattern and two new gene classes in gymnosperms
Q35146537Evolution of the F-box gene family in Euarchontoglires: gene number variation and selection patterns
Q31147504Evolution of the NET (NocA, Nlz, Elbow, TLP-1) protein family in metazoans: insights from expression data and phylogenetic analysis
Q46544462Evolution of the SOUL Heme-Binding Protein Superfamily Across Eukarya
Q59128343Evolution of the Symbiosis-Specific GRAS Regulatory Network in Bryophytes
Q30152925Evolution of the Translocation and Assembly Module (TAM)
Q31049282Evolution of the assassin's arms: insights from a phylogeny of combined transcriptomic and ribosomal DNA data (Heteroptera: Reduvioidea)
Q28661685Evolution of the bHLH genes involved in stomatal development: implications for the expansion of developmental complexity of stomata in land plants
Q34315181Evolution of the eukaryotic dynactin complex, the activator of cytoplasmic dynein
Q111629444Evolution of the leucine-rich repeat receptor-like protein kinase gene family: Ancestral copy number and functional divergence of BAM1 and BAM2 in Brassicaceae
Q40977762Evolution, gene expression profiling and 3D modeling of CSLD proteins in cotton
Q38602005Evolutionary Dynamics of Cryptophyte Plastid Genomes
Q37738564Evolutionary Dynamics of Pathoadaptation Revealed by Three Independent Acquisitions of the VirB/D4 Type IV Secretion System in Bartonella
Q100569664Evolutionary History of Histamine Receptors: Early Vertebrate Origin and Expansion of the H3-H4 Subtypes
Q28607831Evolutionary History of the Photolyase/Cryptochrome Superfamily in Eukaryotes
Q31009960Evolutionary and Phylogenetic Analysis of the Hepaciviruses and Pegiviruses
Q37499727Evolutionary and biotechnological implications of robust hydrogenase activity in halophilic strains of Tetraselmis
Q51074198Evolutionary and mechanistic insights into substrate and product accommodation of CTP:phosphocholine cytidylyltransferase from Plasmodium falciparum.
Q47310256Evolutionary conservation and functional divergence of the LFK gene family play important roles in the photoperiodic flowering pathway of land plants
Q36125271Evolutionary divergence of core and post-translational circadian clock genes in the pitcher-plant mosquito, Wyeomyia smithii
Q28650495Evolutionary dynamics of hAT DNA transposon families in Saccharomycetaceae
Q44857501Evolutionary genomics reveals the premetazoan origin of opposite gating polarity in animal-type voltage-gated ion channels
Q50042798Evolutionary history of Coleoptera revealed by extensive sampling of genes and species.
Q33612848Evolutionary history of LTR-retrotransposons among 20 Drosophila species
Q99711930Evolutionary history of dimethylsulfoniopropionate (DMSP) demethylation enzyme DmdA in marine bacteria
Q35813677Evolutionary history of phosphatidylinositol- 3-kinases: ancestral origin in eukaryotes and complex duplication patterns
Q58559655Evolutionary origin of 2A-like sequences in Totiviridae genomes
Q41620493Evolutionary relationships of iridoviruses and divergence of ascoviruses from invertebrate iridoviruses in the superfamily Megavirales.
Q60927169Evolutionary, structural and functional analysis of the caleosin/peroxygenase gene family in the Fungi
Q111742418Exclusion of fast evolving genes or fast evolving sites produces different archaean phylogenies
Q36934751Exclusive expression of the Rab11 effector SH3TC2 in Schwann cells links integrin-α6 and myelin maintenance to Charcot-Marie-Tooth disease type 4C.
Q36248289Expanding the Repertoire of Carbapenem-Hydrolyzing Metallo-ß-Lactamases by Functional Metagenomic Analysis of Soil Microbiota
Q36062844Expanding the view on the evolution of the nematode dauer signalling pathways: refinement through gene gain and pathway co-option
Q43259322Expansion of the redox-sensitive proteome coincides with the plastid endosymbiosis.
Q91855343Exploration of the propagation of transpovirons within Mimiviridae reveals a unique example of commensalism in the viral world
Q98572015Exploring the virulence gene interactome with CRISPR/dCas9 in the human malaria parasite
Q27319675Expression Atlas of the Deubiquitinating Enzymes in the Adult Mouse Retina, Their Evolutionary Diversification and Phenotypic Roles
Q39032526Expression analysis of octopamine and tyramine receptors in Drosophila
Q46793474Expression of Wnt pathway genes in polyps and medusa-like structures of Ectopleura larynx (Cnidaria: Hydrozoa).
Q55000088Expression of meis and hoxa11 in dipnoan and teleost fins provides new insights into the evolution of vertebrate appendages.
Q56866003Expression of putative circadian clock components in the arbuscular mycorrhizal fungus Rhizoglomus irregulare
Q47914615Expression of six3 and otx in Solenogastres (Mollusca) supports an ancestral role in bilaterian anterior-posterior axis patterning
Q46712283Expression study of the hunchback ortholog in embryos of the onychophoran Euperipatoides rowelli.
Q64077860Extensive conservation of the proneuropeptide and peptide prohormone complement in mollusks
Q36027062Extensive horizontal gene transfers between plant pathogenic fungi.
Q26750665Extracting functional trends from whole genome duplication events using comparative genomics
Q37519282Extraordinary phylogenetic diversity and metabolic versatility in aquifer sediment.
Q41416574Extreme conservation and non-neutral evolution of the cpmA Circadian locus in a globally distributed Chroococcidiopsis sp. from naturally stressful habitats
Q58794553F-CphI represents a new homing endonuclease family using the Endo VII catalytic motif
Q28651470FASconCAT-G: extensive functions for multiple sequence alignment preparations concerning phylogenetic studies
Q38284605FHOD proteins in actin dynamics--a formin' class of its own.
Q35092233Family 34 glycosyltransferase (GT34) genes and proteins in Pinus radiata (radiata pine) and Pinus taeda (loblolly pine).
Q99413958Family Level Phylogenies Reveal Relationships of Plant Viruses within the Order Bunyavirales
Q37252960Fematrin-1 is involved in fetomaternal cell-to-cell fusion in Bovinae placenta and has contributed to diversity of ruminant placentation
Q41040062Finding a partner in the ocean: molecular and evolutionary bases of the response to sexual cues in a planktonic diatom.
Q41490021First complete female mitochondrial genome in four bivalve species genus Donax and their phylogenetic relationships within the Veneroida order
Q56417683First comprehensive multi-tissue transcriptome of Cherax quadricarinatus (Decapoda: Parastacidae) reveals unexpected diversity of endogenous cellulase
Q64110327First cytogenetic information for Lonchothrix emiliae and taxonomic implications for the genus taxa Lonchothrix + Mesomys (Rodentia, Echimyidae, Eumysopinae)
Q36109601First insights into the nature and evolution of antisense transcription in nematodes
Q42229191First report of a new alphaherpesvirus in a freshwater turtle (Pseudemys concinna concinna) kept in Germany
Q101564224First sequencing of ancient coral skeletal proteins
Q51148844Fish polyomaviruses belong to two distinct evolutionary lineages.
Q47813215Flux Control in Glycolysis Varies Across the Tree of Life
Q37688846Formin' cellular structures: Physiological roles of Diaphanous (Dia) in actin dynamics
Q28648099Four hundred million years of silica biomineralization in land plants
Q34080377Francisella RNA polymerase contains a heterodimer of non-identical α subunits
Q92332943Frankia-Enriched Metagenomes from the Earliest Diverging Symbiotic Frankia Cluster: They Come in Teams
Q92670196Frequent cross-species transmissions of foamy virus between domestic and wild felids
Q92218161From Root to Tips: Sporulation Evolution and Specialization in Bacillus subtilis and the Intestinal Pathogen Clostridioides difficile
Q39942673From deep-sea volcanoes to human pathogens: a conserved quorum-sensing signal in Epsilonproteobacteria
Q90141792Frontline Science: Antagonism between regular and atypical Cxcr3 receptors regulates macrophage migration during infection and injury in zebrafish
Q58586630FtsZ of Filamentous, Heterocyst-Forming Cyanobacteria Has a Conserved N-Terminal Peptide Required for Normal FtsZ Polymerization and Cell Division
Q92215136Full genome sequence analysis of a novel adenovirus from a captive polar bear (Ursus maritimus)
Q40752764Functional Analyses of Resurrected and Contemporary Enzymes Illuminate an Evolutionary Path for the Emergence of Exolysis in Polysaccharide Lyase Family 2.
Q59335754Functional Analysis of Four Terpene Synthases in Rose-Scented Pelargonium Cultivars ( × ) and Evolution of Scent in the Genus
Q36744986Functional Annotation and Comparative Analysis of a Zygopteran Transcriptome
Q90522864Functional Characterization of Sex Pheromone Receptors in the Fall Armyworm (Spodoptera frugiperda)
Q33880552Functional analysis of COP1 and SPA orthologs from Physcomitrella and rice during photomorphogenesis of transgenic Arabidopsis reveals distinct evolutionary conservation.
Q50454574Functional and Evolutionary Analysis of the CASPARIAN STRIP MEMBRANE DOMAIN PROTEIN Family.
Q91045443Functional annotation of orthologs in metagenomes: a case study of genes for the transformation of oceanic dimethylsulfoniopropionate
Q35792915Functional conservation of an ancestral Pellino protein in helminth species
Q37071009Functional diversification of sea urchin ABCC1 (MRP1) by alternative splicing
Q37578020Functional evolution of a morphogenetic gradient
Q64234957Functional lability of RNA-dependent RNA polymerases in animals
Q38613280Fungal lifestyle reflected in serine protease repertoire
Q38965113Fur homolog regulates Porphyromonas gingivalis virulence under low-iron/heme conditions through a complex regulatory network
Q92047819Further analyses on the phylogeny of the subclass Scuticociliatia (Protozoa, Ciliophora) based on both nuclear and mitochondrial data
Q31057981GenSeed-HMM: A Tool for Progressive Assembly Using Profile HMMs as Seeds and its Application in Alpavirinae Viral Discovery from Metagenomic Data
Q48122857Gene Regulatory Networks for the Haploid-to-Diploid Transition of Chlamydomonas reinhardtii
Q33739432Gene duplication and co-evolution of G1/S transcription factor specificity in fungi are essential for optimizing cell fitness
Q110697356Gene duplication and rate variation in the evolution of plastid ACCase and Clp genes in angiosperms
Q34699290Gene invasion in distant eukaryotic lineages: discovery of mutually exclusive genetic elements reveals marine biodiversity
Q111630330Gene loss in plants: Evidence from genome-wide phylogenetic analysis of thiamine pyrophosphate-dependent enzymes
Q90681355Generation of Superoxide by OeRbohH, a NADPH Oxidase Activity During Olive (Olea europaea L.) Pollen Development and Germination
Q55106933Genes for de novo biosynthesis of omega-3 polyunsaturated fatty acids are widespread in animals.
Q34692182Genes of the mitochondrial apoptotic pathway in Mytilus galloprovincialis
Q92635767Genetic Characterization of a Recombinant Myxoma Virus in the Iberian Hare (Lepus granatensis)
Q49369697Genetic Competence Drives Genome Diversity in Bacillus subtilis.
Q37679007Genetic and structural study of DNA-directed RNA polymerase II of Trypanosoma brucei, towards the designing of novel antiparasitic agents.
Q91063373Genetic basis for the establishment of endosymbiosis in Paramecium
Q38716624Genetic characterization, molecular epidemiology, and phylogenetic relationships of insect-specific viruses in the taxon Negevirus
Q36181126Genetic diversity of MHC class I loci in six non-model frogs is shaped by positive selection and gene duplication
Q58040814Genetic diversity of giant clams (Tridacna spp.) and their associated Symbiodinium in the central Red Sea
Q36523991Genetic evolution of the neuraminidase of influenza A (H3N2) viruses from 1968 to 2009 and its correspondence to haemagglutinin evolution
Q28486843Genetic variants and increased expression of Parascaris equorum P-glycoprotein-11 in populations with decreased ivermectin susceptibility
Q92410184Genome Analysis of Hypomyces perniciosus, the Causal Agent of Wet Bubble Disease of Button Mushroom (Agaricus bisporus)
Q38861879Genome Analysis of Pseudoloma neurophilia: A Microsporidian Parasite of Zebrafish (Danio rerio).
Q90633493Genome Analysis of a Novel Clade II.b Alphabaculovirus Obtained from Artaxa digramma
Q36017335Genome Evolution and Innovation across the Four Major Lineages of Cryptococcus gattii
Q90433288Genome Sequence Analysis of Auricularia heimuer Combined with Genetic Linkage Map
Q90383241Genome Sequence of a Gyrovirus Associated with Ashy Storm-Petrel
Q36168450Genome Sequencing and Comparative Genomics Analysis Revealed Pathogenic Potential in Penicillium capsulatum as a Novel Fungal Pathogen Belonging to Eurotiales
Q64250208Genome Sequencing of Provides Insights into the Evolution and Pathogenic Mechanisms of the Cobweb Disease Pathogen on Cultivated Mushroom
Q92081995Genome Sequencing of the Japanese Eel (Anguilla japonica) for Comparative Genomic Studies on tbx4 and a tbx4 Gene Cluster in Teleost Fishes
Q55497770Genome analysis of the yeast Diutina catenulata, a member of the Debaryomycetaceae/Metschnikowiaceae (CTG-Ser) clade.
Q37243828Genome and metagenome analyses reveal adaptive evolution of the host and interaction with the gut microbiota in the goose
Q49244125Genome and secretome analysis of Pochonia chlamydosporia provide new insight into egg-parasitic mechanisms.
Q21266668Genome and transcriptome sequencing of the halophilic fungus Wallemia ichthyophaga: haloadaptations present and absent
Q33947260Genome fluctuations in cyanobacteria reflect evolutionary, developmental and adaptive traits
Q49796423Genome mining for peptidases in heat-tolerant and mesophilic fungi and putative adaptations for thermostability.
Q38717213Genome mining reveals high incidence of putative lipopeptide biosynthesis NRPS/PKS clusters containing fatty acyl-AMP ligase genes in biofilm-forming cyanobacteria.
Q42205591Genome of brown tide virus (AaV), the little giant of the Megaviridae, elucidates NCLDV genome expansion and host-virus coevolution
Q64113076Genome of lethal Lepiota venenata and insights into the evolution of toxin-biosynthetic genes
Q28709882Genome of the pitcher plant Cephalotus reveals genetic changes associated with carnivory
Q41711753Genome sequence of the ectophytic fungus Ramichloridium luteum reveals unique evolutionary adaptations to plant surface niche
Q57455948Genome sequencing and assessment of plant growth-promoting properties of a Serratia marcescens strain isolated from vermicompost
Q38605694Genome sequencing and comparative genomics reveal a repertoire of putative pathogenicity genes in chilli anthracnose fungus Colletotrichum truncatum
Q21266647Genome sequencing of four Aureobasidium pullulans varieties: biotechnological potential, stress tolerance, and description of new species
Q92479403Genome- and Community-Level Interaction Insights into Carbon Utilization and Element Cycling Functions of Hydrothermarchaeota in Hydrothermal Sediment
Q46280604Genome-Based Analyses of Six Hexacorallian Species Reject the "Naked Coral" Hypothesis
Q54118725Genome-Wide Analyses of the NAC Transcription Factor Gene Family in Pepper (Capsicum annuum L.): Chromosome Location, Phylogeny, Structure, Expression Patterns, Cis-Elements in the Promoter, and Interaction Network.
Q51783545Genome-Wide Analysis of Corynespora cassiicola Leaf Fall Disease Putative Effectors.
Q38665411Genome-Wide Analysis of Secondary Metabolite Gene Clusters in Ophiostoma ulmi and Ophiostoma novo-ulmi Reveals a Fujikurin-Like Gene Cluster with a Putative Role in Infection
Q89552250Genome-Wide Analysis of the MYB Transcription Factor Superfamily in Physcomitrella patens
Q36383126Genome-Wide Architecture of Disease Resistance Genes in Lettuce
Q38856022Genome-Wide Identification and Analysis of the MYB Transcription Factor Superfamily in Solanum lycopersicum
Q36605455Genome-Wide Identification and Expression Analysis of WRKY Gene Family in Capsicum annuum L.
Q27320774Genome-Wide Identification and Expression of Xenopus F-Box Family of Proteins
Q60927658Genome-Wide Identification of Hsp70 Genes in the Large Yellow Croaker (Larimichthys crocea) and Their Regulated Expression Under Cold and Heat Stress
Q28818502Genome-Wide Survey Reveals Transcriptional Differences Underlying the Contrasting Trichome Phenotypes of Two Sister Desert Poplars
Q28546484Genome-Wide Survey and Expression Profile Analysis of the Mitogen-Activated Protein Kinase (MAPK) Gene Family in Brassica rapa
Q51151432Genome-resolved metagenomics identifies genetic mobility, metabolic interactions, and unexpected diversity in perchlorate-reducing communities.
Q28563954Genome-scale transcriptional study of hybrid effects and regulatory divergence in an F1 hybrid Ruellia (Wild Petunias: Acanthaceae) and its parents
Q98225821Genome-wide adaptive evolution to underground stresses in subterranean mammals: Hypoxia adaption, immunity promotion, and sensory specialization
Q39084448Genome-wide analysis of WRKY transcription factors in Solanum lycopersicum
Q36446829Genome-wide analysis of bZIP-encoding genes in maize
Q38679174Genome-wide analysis of carbohydrate-active enzymes in Pyramimonas parkeae (Prasinophyceae).
Q57031960Genome-wide analysis of horizontally acquired genes in the genus Mycobacterium
Q35864605Genome-wide analysis of the basic leucine zipper (bZIP) transcription factor gene family in six legume genomes
Q58700750Genome-wide diversity in temporal and regional populations of the betabaculovirus Erinnyis ello granulovirus (ErelGV)
Q34362795Genome-wide identification and analysis of membrane-bound O-acyltransferase (MBOAT) gene family in plants
Q28596324Genome-wide identification and comparison of legume MLO gene family
Q40458373Genome-wide identification and evolution of HECT genes in soybean.
Q35534431Genome-wide identification of hsp40 genes in channel catfish and their regulated expression after bacterial infection
Q37592805Genome-wide identification, characterisation and expression profiles of calcium-dependent protein kinase genes in barley (Hordeum vulgare L.).
Q28488138Genome-wide identification, characterization and phylogenetic analysis of 50 catfish ATP-binding cassette (ABC) transporter genes
Q46922914Genome-wide identification, domain architectures and phylogenetic analysis provide new insights into the early evolution of shikimate pathway in prokaryotes
Q41150244Genome-wide identification, evolutionary, and expression analyses of histone H3 variants in plants.
Q46259861Genome-wide investigation of transcription factors provides insights into transcriptional regulation in Plutella xylostella.
Q61447546Genome-wide systematic characterization of bZIP transcription factors and their expression profiles during seed development and in response to salt stress in peanut
Q37526094Genomes of coral dinoflagellate symbionts highlight evolutionary adaptations conducive to a symbiotic lifestyle
Q58855329Genomes of trombidid mites reveal novel predicted allergens and laterally-transferred genes associated with secondary metabolism
Q36676569Genomes to natural products PRediction Informatics for Secondary Metabolomes (PRISM)
Q30357267Genomewide analysis of reassortment and evolution of human influenza A(H3N2) viruses circulating between 1968 and 2011
Q40422574Genomic Diversity of Phages Infecting Probiotic Strains of Lactobacillus paracasei.
Q55501475Genomic Insight into Symbiosis-Induced Insect Color Change by a Facultative Bacterial Endosymbiont, "Candidatus Rickettsiella viridis".
Q29010741Genomic Support for a Moa-Tinamou Clade and Adaptive Morphological Convergence in Flightless Ratites
Q39330739Genomic Survey of a Hyperparasitic Microsporidian Amphiamblys sp. (Metchnikovellidae).
Q63649247Genomic Takeover by Transposable Elements in the Strawberry Poison Frog
Q38935608Genomic analysis of NAC transcription factors in banana (Musa acuminata) and definition of NAC orthologous groups for monocots and dicots.
Q28833700Genomic and Secondary Metabolite Analyses of Streptomyces sp. 2AW Provide Insight into the Evolution of the Cycloheximide Pathway
Q37129701Genomic and Transcriptomic Resolution of Organic Matter Utilization Among Deep-Sea Bacteria in Guaymas Basin Hydrothermal Plumes
Q34736046Genomic and expression analysis of the flax (Linum usitatissimum) family of glycosyl hydrolase 35 genes
Q36320710Genomic and transcriptomic evidence for scavenging of diverse organic compounds by widespread deep-sea archaea
Q36432023Genomic characterization of a newly discovered coronavirus associated with acute respiratory distress syndrome in humans
Q47790296Genomic characterization of two novel SAR11 isolates from the Red Sea, including the first strain of the SAR11 Ib clade
Q38651256Genomic characterization reconfirms the taxonomic status of Lactobacillus parakefiri.
Q57790178Genomic comparison of Trypanosoma conorhini and Trypanosoma rangeli to Trypanosoma cruzi strains of high and low virulence
Q46498170Genomic composition and dynamics among Methanomicrobiales predict adaptation to contrasting environments
Q46899480Genomic differentiation among two strains of the PS1 clade isolated from geographically separated marine habitats
Q36194405Genomic differentiation among wild cyanophages despite widespread horizontal gene transfer
Q107341977Genomic diversity of SARS-CoV-2 can be accelerated by a mutation in the nsp14 gene
Q51144529Genomic expansion of magnetotactic bacteria reveals an early common origin of magnetotaxis with lineage-specific evolution.
Q33853811Genomic fossils reveal adaptation of non-autonomous pararetroviruses driven by concerted evolution of noncoding regulatory sequences
Q36315959Genomic innovations linked to infection strategies across emerging pathogenic chytrid fungi
Q58748184Genomic insights into host adaptation between the wheat stripe rust pathogen (Puccinia striiformis f. sp. tritici) and the barley stripe rust pathogen (Puccinia striiformis f. sp. hordei)
Q35844441Genomic insights into the evolution of hybrid isoprenoid biosynthetic gene clusters in the MAR4 marine streptomycete clade
Q21266642Genomic landscape and evolutionary dynamics of mariner transposable elements within the Drosophila genus
Q37369956Genomic resources for a unique, low-virulence Babesia taxon from China
Q36270047Genomic sequence of 'Candidatus Liberibacter solanacearum' haplotype C and its comparison with haplotype A and B genomes
Q92824265Genomic, metabolic and phenotypic variability shapes ecological differentiation and intraspecies interactions of Alteromonas macleodii
Q54978864Genus-wide comparison of Pseudovibrio bacterial genomes reveal diverse adaptations to different marine invertebrate hosts.
Q50090290Giant fish-killing water bug reveals ancient and dynamic venom evolution in Heteroptera.
Q41534334Giardia's primitive GPL biosynthesis pathways with parasitic adaptation 'patches': implications for Giardia's evolutionary history and for finding targets against Giardiasis
Q27972945Global analysis of apicomplexan protein S-acyl transferases reveals an enzyme essential for invasion
Q38371710Global analysis of biosynthetic gene clusters reveals vast potential of secondary metabolite production in Penicillium species
Q28728369Global transcriptome analysis of the scorpion Centruroides noxius: new toxin families and evolutionary insights from an ancestral scorpion species
Q64936585Global transcriptome profiling and functional analysis reveal that tissue-specific constitutive overexpression of cytochrome P450s confers tolerance to imidacloprid in palm weevils in date palm fields.
Q61445580Globin E is a myoglobin-related, respiratory protein highly expressed in lungfish oocytes
Q37031955Gradual neofunctionalization in the convergent evolution of trichomonad lactate and malate dehydrogenases
Q55381061Grafting or pruning in the animal tree: lateral gene transfer and gene loss?
Q55519500Gut-like ectodermal tissue in a sea anemone challenges germ layer homology.
Q30864270HAMAP in 2015: updates to the protein family classification and annotation system
Q27713604HU histone-like DNA-binding protein from Thermus thermophilus: structural and evolutionary analyses
Q92623904Hce2 domain-containing effectors contribute to the full virulence of Valsa mali in a redundant manner
Q83229857Hemimetabolous insects elucidate the origin of sexual development via alternative splicing
Q39062677Heterogeneity of koala retrovirus isolates
Q57048178High Throughput Identification of Antihypertensive Peptides from Fish Proteome Datasets
Q60915842High Throughput Identification of Novel Conotoxins from the Vermivorous Oak Cone Snail () by Transcriptome Sequencing
Q34456984High temporal and spatial diversity in marine RNA viruses implies that they have an important role in mortality and structuring plankton communities
Q36411762High-Resolution Metatranscriptomics Reveals the Ecological Dynamics of Mosquito-Associated RNA Viruses in Western Australia
Q31159093High-affinity glucose transport in Aspergillus nidulans is mediated by the products of two related but differentially expressed genes.
Q37335427High-efficiency thermal asymmetric interlaced PCR (hiTAIL-PCR) for determination of a highly degenerated prophage WO genome in a Wolbachia strain infecting a fig wasp species
Q56878328High-performance computing selection of models of DNA substitution for multicore clusters
Q35109237Higher-level phylogeny of paraneopteran insects inferred from mitochondrial genome sequences
Q90722837Hinge Region in DNA Packaging Terminase pUL15 of Herpes Simplex Virus: A Potential Allosteric Target for Antiviral Drugs
Q34644912Hippo pathway genes developed varied exon numbers and coevolved functional domains in metazoans for species specific growth control
Q36175583Hirudins and hirudin-like factors in Hirudinidae: implications for function and phylogenetic relationships
Q90340317Horizontal acquisition of a patchwork Calvin cycle by symbiotic and free-living Campylobacterota (formerly Epsilonproteobacteria)
Q35070401Horizontal gene acquisition of Liberibacter plant pathogens from a bacteriome-confined endosymbiont of their psyllid vector
Q57147868Horizontal gene cluster transfer increased hallucinogenic mushroom diversity
Q36238766Horizontal gene transfer drives the evolution of Rh50 permeases in prokaryotes
Q28681895Horizontal transfer and evolution of prokaryote transposable elements in eukaryotes
Q30368772Horizontal transfer of carbohydrate metabolism genes into ectomycorrhizal Amanita.
Q34154729Horizontal transfers and gene losses in the phospholipid pathway of bartonella reveal clues about early ecological niches
Q38615459Host-derived viral transporter protein for nitrogen uptake in infected marine phytoplankton
Q89736930Hox gene expression during development of the phoronid Phoronopsis harmeri
Q37625746Hybridogenesis and a potential case of R2 non-LTR retrotransposon horizontal transmission in Bacillus stick insects (Insecta Phasmida).
Q99570593Identification and Distribution of Novel Cressdnaviruses and Circular molecules in Four Penguin Species in South Georgia and the Antarctic Peninsula
Q90640159Identification and Visualization of Functionally Important Domains and Residues in Herpes Simplex Virus Glycoprotein K(gK) Using a Combination of Phylogenetics and Protein Modeling
Q92410438Identification and characterisation of common glow-worm RNA viruses
Q38618837Identification and characterization of tyrosine kinases in anole lizard indicate the conserved tyrosine kinase repertoire in vertebrates.
Q48014169Identification and expression analysis of multiple small heat shock protein genes in spruce budworm, Choristoneura fumiferana (L.).
Q31086787Identification and functional analysis of three isoforms of bovine BST-2
Q40696198Identification of MBF2 family genes in Bombyx mori and their expression in different tissues and stages and in response to Bacillus bombysepticus infection and starvation
Q55295622Identification of Morus notabilis MADS-box genes and elucidation of the roles of MnMADS33 during endodormancy.
Q35810432Identification of Two Novel Members of the Tentative Genus Wukipolyomavirus in Wild Rodents
Q35108155Identification of a fungi-specific lineage of protein kinases closely related to tyrosine kinases.
Q41583845Identification of an Australian-like dicot-infecting mastrevirus in Pakistan
Q35128292Identification of microRNAs in the coral Stylophora pistillata
Q28650544Identification of new genomospecies in the Mycobacterium terrae complex
Q39036923Identification of novel Bromus- and Trifolium-associated circular DNA viruses
Q33669359Identification of the main venom protein components of Aphidius ervi, a parasitoid wasp of the aphid model Acyrthosiphon pisum.
Q47749598Identification, characterisation and molecular modelling of two AP endonucleases from base excision repair pathway in sugarcane provide insights on the early evolution of green plants
Q39198291Identification, genealogical structure and population genetics of S-alleles in Malus sieversii, the wild ancestor of domesticated apple
Q50542006Identifying Optimal Models of Evolution.
Q39030334Immunomics of the koala (Phascolarctos cinereus).
Q35952312In Silico Reconstruction of the Viral Evolutionary Lineage Yields a Potent Gene Therapy Vector
Q31043319In silico prediction of the G-protein coupled receptors expressed during the metamorphic molt of Sagmariasus verreauxi (Crustacea: Decapoda) by mining transcriptomic data: RNA-seq to repertoire
Q38187788Incomplete sterols and hopanoids pathways in ciliates: gene loss and acquisition during evolution as a source of biosynthetic genes
Q47437809Increased Affinity for RNA Targets Evolved Early in Animal and Plant Dicer Lineages through Different Structural Mechanisms
Q36172093Infectious endogenous retroviruses in cats and emergence of recombinant viruses
Q39023260Inferring Trees
Q27335602Infinitely long branches and an informal test of common ancestry
Q33719603Insight into the evolution of microbial metabolism from the deep-branching bacterium, Thermovibrio ammonificans
Q64072870Insight into the genome and brackish water adaptation strategies of toxic and bloom-forming Baltic Sea Dolichospermum sp. UHCC 0315
Q57212200Insights into Circovirus Host Range from the Genomic Fossil Record
Q34036436Insights into archaeal evolution and symbiosis from the genomes of a nanoarchaeon and its inferred crenarchaeal host from Obsidian Pool, Yellowstone National Park
Q54965316Insights into the Genome Sequence of Chromobacterium amazonense Isolated from a Tropical Freshwater Lake.
Q93369480Insights into the origin and evolution of Peritrichia (Oligohymenophorea, Ciliophora) based on analyses of morphology and phylogenomics
Q26314671Insulin receptor-like ectodomain genes and splice variants are found in both arthropods and human brain cDNA
Q59330302Integration of phylogenomics and molecular modeling reveals lineage-specific diversification of toxins in scorpions
Q37532887Integration of two ancestral chaperone systems into one: the evolution of eukaryotic molecular chaperones in light of eukaryogenesis
Q56927783Integrative transcriptomic and genomic analysis of odorant binding proteins and chemosensory proteins in aphids
Q36596828Intein Clustering Suggests Functional Importance in Different Domains of Life
Q33809846Inteins as indicators of gene flow in the halobacteria
Q33783939Interferon-induced genes of the expanded IFIT family show conserved antiviral activities in non-mammalian species
Q64101008Interspecific delimitation and relationships among four Ostrya species based on plastomes
Q37229435Iron-Sulfur Cluster Biogenesis Chaperones: Evidence for Emergence of Mutational Robustness of a Highly Specific Protein-Protein Interaction
Q58802975Iron-Sulfur Cluster Biosynthesis in Algae with Complex Plastids
Q39201697Is permanent parasitism reversible?--critical evidence from early evolution of house dust mites
Q96771314Isolation and characterization of a novel geminivirus from parsley
Q50176821Isolation, characterization and prevalence of a novel Gammaherpesvirus in Eptesicus fuscus, the North American big brown bat.
Q61796297Kingdom-wide comparison reveals the evolution of diurnal gene expression in Archaeplastida
Q41080247Knockdown of a putative alanine aminotransferase gene affects amino acid content and flight capacity in the Colorado potato beetle Leptinotarsa decemlineata
Q51115738Knockdown of a putative argininosuccinate lyase gene reduces arginine content and impairs nymphal development in Nilaparvata lugens.
Q46759520Knocking down a putative Δ(1) -pyrroline-5-carboxylate dehydrogenase gene by RNA interference inhibits flight and causes adult lethality in the Colorado potato beetle Leptinotarsa decemlineata (Say).
Q46542391Lack of GLYCOLATE OXIDASE1, but Not GLYCOLATE OXIDASE2, Attenuates the Photorespiratory Phenotype of CATALASE2-Deficient Arabidopsis.
Q90074857Lactococcus Ceduovirus Phages Isolated from Industrial Dairy Plants-from Physiological to Genomic Analyses
Q34078597Large-scale phylogenetic classification of fungal chitin synthases and identification of a putative cell-wall metabolism gene cluster in Aspergillus genomes
Q90656046Large-scale phylogenomic analysis suggests three ancient superclades of the WUSCHEL-RELATED HOMEOBOX transcription factor family in plants
Q38808159Late acquisition of mitochondria by a host with chimaeric prokaryotic ancestry
Q37237755Laterally Transferred Gene Recruited as a Venom in Parasitoid Wasps
Q46274956Legionella Becoming a Mutualist: Adaptive Processes Shaping the Genome of Symbiont in the Louse Polyplax serrata
Q89879045Letea Virus: Comparative Genomics and Phylogenetic Analysis of a Novel Reassortant Orbivirus Discovered in Grass Snakes (Natrix natrix)
Q28559594Lineage-specific duplication of amphioxus retinoic acid degrading enzymes (CYP26) resulted in sub-functionalization of patterning and homeostatic roles
Q35802492Localization and Evolution of Putative Triose Phosphate Translocators in the Diatom Phaeodactylum tricornutum
Q36245873Long-Lasting Gene Conversion Shapes the Convergent Evolution of the Critical Methanogenesis Genes
Q28649481Low frequency of paleoviral infiltration across the avian phylogeny
Q58740433Luciferin production and luciferase transcription in the bioluminescent copepod
Q33355174MORE SPIKELETS1 is required for spikelet fate in the inflorescence of Brachypodium.
Q24299607MPV17L2 is required for ribosome assembly in mitochondria
Q28545804Macrocyclic lactones differ in interaction with recombinant P-glycoprotein 9 of the parasitic nematode Cylicocylus elongatus and ketoconazole in a yeast growth assay
Q35700865Marsupials and monotremes possess a novel family of MHC class I genes that is lost from the eutherian lineage
Q36045957Mass spectrometry analysis and transcriptome sequencing reveal glowing squid crystal proteins are in the same superfamily as firefly luciferase
Q55004065Massive lateral transfer of genes encoding plant cell wall-degrading enzymes to the mycoparasitic fungus Trichoderma from its plant-associated hosts.
Q42373942Membrane Trafficking Modulation during Entamoeba Encystation
Q31097323Metagenomic Analysis of the Indian Ocean Picocyanobacterial Community: Structure, Potential Function and Evolution
Q34881554Metagenomic insights into S(0) precipitation in a terrestrial subsurface lithoautotrophic ecosystem
Q64061089Metatranscriptomic Signatures Associated With Phytoplankton Regime Shift From Diatom Dominance to a Dinoflagellate Bloom
Q33687766Metazoan Ribosome Inactivating Protein encoding genes acquired by Horizontal Gene Transfer
Q60950039Metazoan evolution of glutamate receptors reveals unreported phylogenetic groups and divergent lineage-specific events
Q37028201Metazoan innovation: from aromatic amino acids to extracellular signaling
Q46259928Methanogenesis in oxygenated soils is a substantial fraction of wetland methane emissions
Q34366711Microsporidian genomes harbor a diverse array of transposable elements that demonstrate an ancestry of horizontal exchange with metazoans.
Q92740119Mikania micrantha genome provides insights into the molecular mechanism of rapid growth
Q34655446Mimiviridae: clusters of orthologous genes, reconstruction of gene repertoire evolution and proposed expansion of the giant virus family
Q41344556MitoPhAST, a new automated mitogenomic phylogeny tool in the post-genomic era with a case study of 89 decapod mitogenomes including eight new freshwater crayfish mitogenomes
Q34034694Mitochondrial DNA of Clathrina clathrus (Calcarea, Calcinea): six linear chromosomes, fragmented rRNAs, tRNA editing, and a novel genetic code.
Q57455494Mitochondrial OXPHOS genes provides insights into genetics basis of hypoxia adaptation in anchialine cave shrimps
Q59612392Mitochondrial genome and polymorphic microsatellite markers from the abyssal sponge Plenaster craigi Lim & Wiklund, 2017: tools for understanding the impact of deep-sea mining
Q34257967Mitochondrial genome evolution in species belonging to the Phialocephala fortinii s.l. - Acephala applanata species complex
Q35865203Mitochondrial group I and group II introns in the sponge orders Agelasida and Axinellida
Q38805243Mitochondrial pyruvate carrier in Trypanosoma brucei
Q28822019Mitogenomes from type specimens, a genotyping tool for morphologically simple species: ten genomes of agar-producing red algae
Q38798531ModelFinder: fast model selection for accurate phylogenetic estimates
Q43476183ModelOMatic: fast and automated model selection between RY, nucleotide, amino acid, and codon substitution models
Q92737768ModelTest-NG: A New and Scalable Tool for the Selection of DNA and Protein Evolutionary Models
Q37628651Molecular Characterization of Voltage-Gated Sodium Channels and Their Relations with Paralytic Shellfish Toxin Bioaccumulation in the Pacific Oyster Crassostrea gigas.
Q36512492Molecular Evolution of Aralkylamine N-Acetyltransferase in Fish: A Genomic Survey
Q36431618Molecular Evolution of Slow and Quick Anion Channels (SLACs and QUACs/ALMTs).
Q64115037Molecular Evolution of Tryptophan Hydroxylases in Vertebrates: A Comparative Genomic Survey
Q92872735Molecular Evolution of the Glutathione S-Transferase Family in the Bemisia tabaci Species Complex
Q55405532Molecular Evolutionary Analysis of the HCRTR Gene Family in Vertebrates.
Q28608570Molecular and functional evolution of the fungal diterpene synthase genes
Q52880681Molecular characterization of the lipophorin receptor in the crustacean ectoparasite Lepeophtheirus salmonis.
Q48367947Molecular characterization, phylogenetic analysis and expression profiling of myoglobin and cytoglobin genes in response to heat stress in channel catfish Ictalurus punctatus
Q42614366Molecular cloning and characterization of a putative proline dehydrogenase gene in the Colorado potato beetle, Leptinotarsa decemlineata
Q111346873Molecular cloning and characterization of two alanine aminotransferase genes in the white-backed planthopper Sogatella furcifera
Q50052647Molecular detection and phylogenetic analysis of Anaplasma marginale and Anaplasma centrale amongst transhumant cattle in north-eastern Uganda.
Q91945406Molecular evidence for novel mercury methylating microorganisms in sulfate-impacted lakes
Q52580922Molecular evolution and functional divergence of alcohol dehydrogenases in animals, fungi and plants.
Q46929144Molecular evolution and functional divergence of the metallothionein gene family in vertebrates
Q37738374Molecular evolution and functional divergence of tubulin superfamily in the fungal tree of life
Q90389378Molecular evolution and transcriptional profile of GH3 and GH20 β-N-acetylglucosaminidases in the entomopathogenic fungus Metarhizium anisopliae
Q33847408Molecular evolution of NASP and conserved histone H3/H4 transport pathway
Q36438638Molecular mapping and characterization of the silkworm apodal mutant
Q28652355Molecular phylogenetic analyses support the monophyly of Hexapoda and suggest the paraphyly of Entognatha
Q28658967Molecular phylogeny of Myriapoda provides insights into evolutionary patterns of the mode in post-embryonic development
Q35797868Molecular phylogeny of four homeobox genes from the purple sea star Pisaster ochraceus
Q28597797Molecular phylogeny of sequenced Saccharomycetes reveals polyphyly of the alternative yeast codon usage
Q41828072Molecular recognition by a polymorphic cell surface receptor governs cooperative behaviors in bacteria.
Q34780891Molecular variation and horizontal gene transfer of the homocysteine methyltransferase gene mmuM and its distribution in clinical pathogens
Q102220333Morphology, ultrastructure, genomics, and phylogeny of Euplotes vanleeuwenhoeki sp. nov. and its ultra-reduced endosymbiont "Candidatus Pinguicoccus supinus" sp. nov
Q35853966Multimodular type I polyketide synthases in algae evolve by module duplications and displacement of AT domains in trans.
Q36259453Multiple measures could alleviate long-branch attraction in phylogenomic reconstruction of Cupressoideae (Cupressaceae).
Q46576762Müller glia reactivity follows retinal injury despite the absence of the glial fibrillary acidic protein gene in Xenopus
Q52591427NCX-DB: a unified resource for integrative analysis of the sodium calcium exchanger super-family.
Q41850827Natural occurrence and characterization of two internal ribosome entry site elements in a novel virus, canine picodicistrovirus, in the picornavirus-like superfamily.
Q38865859Negeviruses found in multiple species of mosquitoes from southern Portugal: Isolation, genetic diversity, and replication in insect cell culture
Q27301877Nemertean toxin genes revealed through transcriptome sequencing.
Q89576044Neofunctionalization of the UCP1 mediated the non-shivering thermogenesis in the evolution of small-sized placental mammals
Q85857492Neuropeptide Y family receptors Y1 and Y2 from sea lamprey, Petromyzon marinus
Q52558714New Insights into the Phylogeny of the TMBIM Superfamily across the Three of Life: Comparative Genomics and Synteny Networks Reveal Independent Evolution of the BI and LFG Families in Plants.
Q90095677New Non-Bilaterian Transcriptomes Provide Novel Insights into the Evolution of Coral Skeletomes
Q57801384New epidemic cluster of pre-extensively drug resistant isolates of Mycobacterium tuberculosis Ural family emerging in Eastern Europe
Q35182867New insights into 1-aminocyclopropane-1-carboxylate (ACC) deaminase phylogeny, evolution and ecological significance
Q102319891New insights on the function of plant acyl carrier proteins from comparative and evolutionary analysis
Q64096817New insights on unspecific peroxygenases: superfamily reclassification and evolution
Q37660955New roles in hemicellulosic sugar fermentation for the uncultivated Bacteroidetes family BS11
Q64237638Newly Discovered Occurrences and Gene Tree of the Extracellular Globins and Linker Chains from the Giant Hexagonal Bilayer Hemoglobin in Metazoans
Q36172925Nitrogen fixation in a chemoautotrophic lucinid symbiosis.
Q42177530Non-invasive delivery of dsGST is lethal to the sweet potato whitefly, Bemisia tabaci (G.) (Hemiptera: Aleyrodidae).
Q35586994Novel Detection of Insecticide Resistance Related P450 Genes and Transcriptome Analysis of the Hemimetabolous Pest Erthesina fullo (Thunberg) (Hemiptera: Heteroptera).
Q59356009Novel Divergent Polar Bear-Associated Mastadenovirus Recovered from a Deceased Juvenile Polar Bear
Q36165324Novel IgG-Degrading Enzymes of the IgdE Protease Family Link Substrate Specificity to Host Tropism of Streptococcus Species
Q110696387Novel adenovirus associated with common tern (Sterna hirundo) chicks
Q56336206Novel anelloviruses identified in buccal swabs of Antarctic fur seals
Q38690511Novel mastreviruses identified in Australian wild rice
Q40028689Novel origin of lamin-derived cytoplasmic intermediate filaments in tardigrades
Q93032837Novel smacoviruses identified in the faeces of two wild felids: North American bobcat and African lion
Q36685765Novel, Deep-Branching Heterotrophic Bacterial Populations Recovered from Thermal Spring Metagenomes
Q54251278Old Yellow Enzyme from Trypanosoma cruzi Exhibits In Vivo Prostaglandin F2α Synthase Activity and Has a Key Role in Parasite Infection and Drug Susceptibility.
Q58702528Opposite Polarity Monospore Genome De Novo Sequencing and Comparative Analysis Reveal the Possible Heterothallic Life Cycle of
Q44051900Opsins in onychophora (velvet worms) suggest a single origin and subsequent diversification of visual pigments in arthropods
Q36273161Origin and diversification of leucine-rich repeat receptor-like protein kinase (LRR-RLK) genes in plants
Q61446738Origin and diversification of the plasminogen activation system among chordates
Q40890233Origin and evolution of lysyl oxidases
Q89991982Origin and evolution of polycyclic triterpene synthesis
Q37679855Origin and evolution of transporter substrate specificity within the NPF family
Q28650018Origin of giant viruses from smaller DNA viruses not from a fourth domain of cellular life
Q34464338Origin, diversification and substrate specificity in the family of NCS1/FUR transporters
Q34698737Origin, evolution and classification of type-3 copper proteins: lineage-specific gene expansions and losses across the Metazoa
Q99550987Origins and evolution of cuticle biosynthetic machinery in land plants
Q28652417Osiris: accessible and reproducible phylogenetic and phylogenomic analyses within the Galaxy workflow management system
Q55116326Overview of Oxidative Stress Response Genes in Selected Halophilic Fungi.
Q26997313Overview of organohalide-respiring bacteria and a proposal for a classification system for reductive dehalogenases
Q61443167Paleozoic diversification of terrestrial chitin-degrading bacterial lineages
Q27498833Pandoraviruses are highly derived phycodnaviruses
Q28727824Parallel evolution of auditory genes for echolocation in bats and toothed whales
Q34687033Parallel reduction in expression, but no loss of functional constraint, in two opsin paralogs within cave populations of Gammarus minus (Crustacea: Amphipoda)
Q30008874Paralog-Specific Patterns of Structural Disorder and Phosphorylation in the Vertebrate SH3-SH2-Tyrosine Kinase Protein Family
Q52609642Passion Fruit Chlorotic Mottle Virus: Molecular Characterization of a New Divergent Geminivirus in Brazil.
Q52311064Pathogenic adaptations of Colletotrichum fungi revealed by genome wide gene family evolutionary analyses.
Q39541176Pathogenic potential and growth kinetics of Muko virus in mice and human-derived cells
Q46278047Pathogenicity of Human ST23 Streptococcus agalactiae to Fish and Genomic Comparison of Pathogenic and Non-pathogenic Isolates
Q35637264Pathways of Amino Acid Degradation in Nilaparvata lugens (Stål) with Special Reference to Lysine-Ketoglutarate Reductase/Saccharopine Dehydrogenase (LKR/SDH).
Q55339888Patterning the Asteraceae Capitulum: Duplications and Differential Expression of the Flower Symmetry CYC2-Like Genes.
Q58802246Patterns in evolutionary origins of heme, chlorophyll and isopentenyl diphosphate biosynthetic pathways suggest non-photosynthetic periods prior to plastid replacements in dinoflagellates
Q46279814Patterns of specificity and diversity in species of Paraorygmatobothrium Ruhnke, 1994 (Cestoda: Phyllobothriidae) in Moreton Bay, Queensland, Australia, with the description of four new species
Q47128353PeaTAR1B: Characterization of a Second Type 1 Tyramine Receptor of the American Cockroach, Periplaneta americana
Q35798333Peroxiredoxin 6 from the Antarctic emerald rockcod: molecular characterization of its response to warming
Q48023146PhyloChromoMap, a tool for mapping phylogenomic history along chromosomes, reveals the dynamic nature of karyotype evolution in Plasmodium falciparum
Q45001166Phylobiochemical characterization of class-Ib aspartate/prephenate aminotransferases reveals evolution of the plant arogenate phenylalanine pathway
Q28546075Phylogenetic Analysis of Nucleus-Encoded Acetyl-CoA Carboxylases Targeted at the Cytosol and Plastid of Algae
Q34539745Phylogenetic Resolution of Deep Eukaryotic and Fungal Relationships Using Highly Conserved Low-Copy Nuclear Genes
Q55262161Phylogenetic analyses and in-seedling expression of ammonium and nitrate transporters in wheat.
Q41899878Phylogenetic analyses uncover a novel clade of transferrin in nonmammalian vertebrates
Q30587303Phylogenetic analysis and DNA-based species confirmation in Anopheles (Nyssorhynchus).
Q28711956Phylogenetic analysis and comparative genomics of purine riboswitch distribution in prokaryotes
Q41517349Phylogenetic analysis and expression patterns of Pax genes in the onychophoran Euperipatoides rowelli reveal a novel bilaterian Pax subfamily.
Q35085360Phylogenetic analysis of CDK and cyclin proteins in premetazoan lineages.
Q46616486Phylogenetic analysis of HpnP reveals the origin of 2-methylhopanoid production in Alphaproteobacteria
Q102379337Phylogenetic analysis of cell-cycle regulatory proteins within the Symbiodiniaceae
Q37644272Phylogenetic analysis of eukaryotic NEET proteins uncovers a link between a key gene duplication event and the evolution of vertebrates
Q35361405Phylogenetic analysis of glycerol 3-phosphate acyltransferases in opisthokonts reveals unexpected ancestral complexity and novel modern biosynthetic components
Q28607149Phylogenetic analysis of higher-level relationships within Hydroidolina (Cnidaria: Hydrozoa) using mitochondrial genome data and insight into their mitochondrial transcription
Q41961534Phylogenetic analysis of k(+) transporters in bryophytes, lycophytes, and flowering plants indicates a specialization of vascular plants.
Q51095691Phylogenetic analysis of proteins involved in the stringent response in plant cells.
Q85611481Phylogenetic analysis of the Argonaute protein family in platyhelminths
Q51761614Phylogenetic analysis of the CDGSH iron-sulfur binding domain reveals its ancient origin.
Q35153094Phylogenetic analysis of the endoribonuclease Dicer family
Q86626300Phylogenetic analysis of the mitochondrial genomes and nuclear rRNA genes of ticks reveals a deep phylogenetic structure within the genus Haemaphysalis and further elucidates the polyphyly of the genus Amblyomma with respect to Amblyomma sphenodonti
Q41123779Phylogenetic and Molecular Evolutionary Analysis of Mitophagy Receptors under Hypoxic Conditions
Q34336030Phylogenetic position and replication kinetics of Heliothis virescens ascovirus 3h (HvAV-3h) isolated from Spodoptera exigua
Q35344586Phylogenetic relatedness determined between antibiotic resistance and 16S rRNA genes in actinobacteria.
Q89125369Phylogenetic relationship analyses of complicated class Spirotrichea based on transcriptomes from three diverse microbial eukaryotes: Uroleptopsis citrina, Euplotes vannus and Protocruzia tuzeti
Q54209707Phylogenetic relationships, stage-specific expression and localisation of a unique family of inactive cysteine proteases in Sarcoptes scabiei.
Q59128817Phylogenetic, comparative genomic and structural analyses of human Streptococcus agalactiae ST485 in China
Q34505487Phylogenetically driven sequencing of extremely halophilic archaea reveals strategies for static and dynamic osmo-response
Q28647434Phylogenomic Analyses Indicate that Early Fungi Evolved Digesting Cell Walls of Algal Ancestors of Land Plants
Q38823830Phylogenomic Reconstruction of the Oomycete Phylogeny Derived from 37 Genomes
Q64166974Phylogenomic analyses and distribution of terpene synthases among Streptomyces
Q91582105Phylogenomic analyses of brachyuran crabs support early divergence of primary freshwater crabs
Q21559625Phylogenomic analyses of nuclear genes reveal the evolutionary relationships within the BEP clade and the evidence of positive selection in Poaceae
Q35016358Phylogenomic analyses support the bifurcation of ciliates into two major clades that differ in properties of nuclear division
Q30367458Phylogenomic analyses uncover origin and spread of the Wolbachia pandemic.
Q46800628Phylogenomic analysis of Cation Diffusion Facilitator proteins uncovers Ni2+/Co2+ transporters
Q50970728Phylogenomic analysis of integral diiron membrane histidine motif-containing enzymes in ciliates provides insights into their function and evolutionary relationships.
Q43070894Phylogenomic analysis reveals genome-wide purifying selection on TBE transposons in the ciliate Oxytricha
Q37222590Phylogenomic analysis supports the ancestral presence of LPS-outer membranes in the Firmicutes
Q34469160Phylogenomic analysis uncovers the evolutionary history of nutrition and infection mode in rice blast fungus and other Magnaporthales
Q31117690Phylogenomics Using Transcriptome Data
Q42004752Phylogenomics and analysis of shared genes suggest a single transition to mutualism in Wolbachia of nematodes
Q39888475Phylogenomics of 'Discosea': A new molecular phylogenetic perspective on Amoebozoa with flat body forms
Q38392204Phylogenomics of non-model ciliates based on transcriptomic analyses
Q34277581Phylogenomics of prokaryotic ribosomal proteins
Q40459833Phylogenomics-guided discovery of a novel conserved cassette of short linear motifs in BubR1 essential for the spindle checkpoint.
Q34433772Phylogeny and phylogeography of functional genes shared among seven terrestrial subsurface metagenomes reveal N-cycling and microbial evolutionary relationships
Q50133112Phylogeny and putative virulence gene analysis of Bartonella bovis.
Q35878142Phylogeny of Syndermata (syn. Rotifera): Mitochondrial gene order verifies epizoic Seisonidea as sister to endoparasitic Acanthocephala within monophyletic Hemirotifera.
Q34701661Phylogeny of bacterial and archaeal genomes using conserved genes: supertrees and supermatrices
Q52329842Phylogeny, evolution and mitochondrial gene order rearrangement in scale worms (Aphroditiformia, Annelida).
Q91826531Physiological and evolutionary implications of tetrameric photosystem I in cyanobacteria
Q38759107Phytochelatin 2 accumulates in roots of the seagrass Enhalus acoroides collected from sediment highly contaminated with lead
Q35917077Phytochrome diversity in green plants and the origin of canonical plant phytochromes
Q42822921Picocyanobacteria containing a novel pigment gene cluster dominate the brackish water Baltic Sea
Q38438894Plant Proteins Are Smaller Because They Are Encoded by Fewer Exons than Animal Proteins.
Q50464082Plant and animal glycolate oxidases have a common eukaryotic ancestor and convergently duplicated to evolve long-chain 2-hydroxy acid oxidases.
Q92839877Plastid phylogenomics and biogeographic analysis support a trans-Tethyan origin and rapid early radiation of Cornales in the Mid-Cretaceous
Q28652203Pogo-like transposases have been repeatedly domesticated into CENP-B-related proteins
Q40890466Polyphyly of nuclear lamin genes indicates an early eukaryotic origin of the metazoan-type intermediate filament proteins
Q21131104Population and genomic analysis of the genus Halorubrum
Q34165727Positive selection and multiple losses of the LINE-1-derived L1TD1 gene in mammals suggest a dual role in genome defense and pluripotency.
Q35002388Positive selection in glycolysis among Australasian stick insects
Q34444192Potential for biogeochemical cycling of sulfur, iron and carbon within massive sulfide deposits below the seafloor
Q60949736Powdery Mildews Are Characterized by Contracted Carbohydrate Metabolism and Diverse Effectors to Adapt to Obligate Biotrophic Lifestyle
Q30935504Prevalence of Borrelia burgdorferi-infected ticks from wildlife hosts, a response to Norris et al.
Q52683055Probing recalcitrant problems in polyclad evolution and systematics with novel mitochondrial genome resources.
Q28818345Production of Secondary Metabolites in Extreme Environments: Food- and Airborne Wallemia spp. Produce Toxic Metabolites at Hypersaline Conditions
Q30044268Prokaryotic ancestry and gene fusion of a dual localized peroxiredoxin in malaria parasites
Q50233220Promiscuous plasmid replication in thermophiles: Use of a novel hyperthermophilic replicon for genetic manipulation of Clostridium thermocellum at its optimum growth temperature.
Q64076714Proteome and allergenome of the European house dust mite Dermatophagoides pteronyssinus
Q38118318Proving universal common ancestry with similar sequences
Q36888665Punctuated evolution and transitional hybrid network in an ancestral cell cycle of fungi
Q39151532Quest for Ancestors of Eukaryal Cells Based on Phylogenetic Analyses of Aminoacyl-tRNA Synthetases.
Q37525448RNA interference depletion of the Halloween gene disembodied implies its potential application for management of planthopper Sogatella furcifera and Laodelphax striatellus
Q41020457RNA interference-aided knockdown of a putative saccharopine dehydrogenase leads to abnormal ecdysis in the brown planthopper, Nilaparvata lugens (Stål) (Hemiptera: Delphacidae).
Q89586261RNA processing machineries in Archaea: the 5'-3' exoribonuclease aRNase J of the β-CASP family is engaged specifically with the helicase ASH-Ski2 and the 3'-5' exoribonucleolytic RNA exosome machinery
Q92127886RNA-seq, de novo transcriptome assembly and flavonoid gene analysis in 13 wild and cultivated berry fruit species with high content of phenolics
Q64066393RNAi mediated myosuppressin deficiency affects muscle development and survival in the salmon louse (Lepeophtheirus salmonis)
Q36210105RNAi-Mediated Functional Analysis of Bursicon Genes Related to Adult Cuticle Formation and Tanning in the Honeybee, Apis mellifera
Q39947435ROCK inhibition abolishes the establishment of the aquiferous system in Ephydatia muelleri (Porifera, Demospongiae).
Q59132732Rapid Divergence of Genome Architectures Following the Origin of an Ectomycorrhizal Symbiosis in the Genus Amanita
Q21128764Rapid diversification associated with a macroevolutionary pulse of developmental plasticity
Q35757814Rapid evolution of chemosensory receptor genes in a pair of sibling species of orchid bees (Apidae: Euglossini).
Q24289194Rapid evolutionary dynamics of structural disorder as a potential driving force for biological divergence in flaviviruses
Q61784113Reassessment of the classification of Bryopsidales (Chlorophyta) based on chloroplast phylogenomic analyses
Q31161352Reassessment of the taxonomic position of Burkholderia andropogonis and description of Robbsia andropogonis gen. nov., comb. nov.
Q111347591Receptor tyrosine kinase genes respond transcriptionally to sublethal doses of five insecticides by a mode-of-action independent way in Leptinotarsa decemlineata (Say)
Q37954260Recombination in hepatitis C virus
Q57178416Reconstructed evolution of insulin receptors in insects reveals duplications in early insects and cockroaches
Q47149015Reconstructing evolutionary trees in parallel for massive sequences
Q28817751Reconstructing the Backbone of the Saccharomycotina Yeast Phylogeny Using Genome-Scale Data
Q59135587Reconstructing the functions of endosymbiotic Mollicutes in fungus-growing ants
Q52754095Reconstructing the phylogeny of aphids (Hemiptera: Aphididae) using DNA of the obligate symbiont Buchnera aphidicola.
Q42592727Recruitment of glycosyl hydrolase proteins in a cone snail venomous arsenal: further insights into biomolecular features of Conus venoms
Q40494874Recurrent horizontal transfer of arsenite methyltransferase genes facilitated adaptation of life to arsenic.
Q36233248Red Algal Phylogenomics Provides a Robust Framework for Inferring Evolution of Key Metabolic Pathways
Q38895215Red and problematic green phylogenetic signals among thousands of nuclear genes from the photosynthetic and apicomplexa-related Chromera velia
Q34545653Redefining the invertebrate RNA virosphere
Q46404905Reduction of antinutritional glucosinolates in Brassica oilseeds by mutation of genes encoding transporters.
Q35620910Reevaluating Emx gene phylogeny: homopolymeric amino acid tracts as a potential factor obscuring orthology signals in cyclostome genes.
Q55645537Refining a steroidogenic model: an analysis of RNA-seq datasets from insect prothoracic glands.
Q43594304Regulation of proteorhodopsin gene expression by nutrient limitation in the marine bacterium Vibrio sp. AND4.
Q33738188Regulation of the cholesterol biosynthetic pathway and its integration with fatty acid biosynthesis in the oleaginous microalga Nannochloropsis oceanica
Q64079780Reiterative Synthesis by the Ribosome and Recognition of the N-Terminal Formyl Group by Biosynthetic Machinery Contribute to Evolutionary Conservation of the Length of Antibiotic Microcin C Peptide Precursor
Q59355444Related Endogenous Retrovirus-K Elements Harbor Distinct Protease Active Site Motifs
Q89165837Relative Evolutionary Rates in Proteins Are Largely Insensitive to the Substitution Model
Q90455730Relative model fit does not predict topological accuracy in single-gene protein phylogenetics
Q87873424Remodeling the Specificity of an Endosomal CORVET Tether Underlies Formation of Regulated Secretory Vesicles in the Ciliate Tetrahymena thermophila
Q36185915Resurrecting ancestral structural dynamics of an antiviral immune receptor: adaptive binding pocket reorganization repeatedly shifts RNA preference.
Q37228148Resurrection of an Urbilaterian U1A/U2B″/SNF protein
Q56558305Retention and losses of ultraviolet-sensitive visual pigments in bats
Q46947263Rethinking the evolution of eukaryotic metabolism: novel cellular partitioning of enzymes in stramenopiles links serine biosynthesis to glycolysis in mitochondria
Q62570591Reticulate evolution in eukaryotes: Origin and evolution of the nitrate assimilation pathway
Q48128275Retinoic acid signaling and neurogenic niche regulation in the developing peripheral nervous system of the cephalochordate amphioxus.
Q40285511Retinoid level dynamics during gonad recycling in the limpet Patella vulgata
Q28595512Reverse transcriptase genes are highly abundant and transcriptionally active in marine plankton assemblages
Q88741790Revised Phylogeny of the Cellulose Synthase Gene Superfamily: Insights into Cell Wall Evolution
Q36318982Riboflavin Provisioning Underlies Wolbachia's Fitness Contribution to Its Insect Host
Q48030111Roles of Retinoic Acid Signaling in Shaping the Neuronal Architecture of the Developing Amphioxus Nervous System
Q33687403Rotiferan Hox genes give new insights into the evolution of metazoan bodyplans.
Q49737885SACCHARIS: an automated pipeline to streamline discovery of carbohydrate active enzyme activities within polyspecific families and de novo sequence datasets.
Q50278723Safety assessment of dicamba mono-oxygenases that confer dicamba tolerance to various crops.
Q30978284Salmon Gill Poxvirus, the Deepest Representative of the Chordopoxvirinae
Q27348728Sapocribrum chincoteaguense n. gen. n. sp.: A Small, Scale-bearing Amoebozoan with Flabellinid Affinities.
Q54969367Screening of polyhydroxyalkanoate-producing bacteria and PhaC-encoding genes in two hypersaline microbial mats from Guerrero Negro, Baja California Sur, Mexico.
Q35713339Seagrass (Zostera marina) Colonization Promotes the Accumulation of Diazotrophic Bacteria and Alters the Relative Abundances of Specific Bacterial Lineages Involved in Benthic Carbon and Sulfur Cycling.
Q38925160Seasonal patterns in Arctic prasinophytes and inferred ecology of Bathycoccus unveiled in an Arctic winter metagenome
Q36179012Secondary metabolite gene clusters in the entomopathogen fungus Metarhizium anisopliae: genome identification and patterns of expression in a cuticle infection model
Q47169628Secretome Characterization and Correlation Analysis Reveal Putative Pathogenicity Mechanisms and Identify Candidate Avirulence Genes in the Wheat Stripe Rust Fungus Puccinia striiformis f. sp. tritici
Q41909842Shared gene structures and clusters of mutually exclusive spliced exons within the metazoan muscle myosin heavy chain genes
Q92702107Shedding Light on the Antimicrobial Peptide Arsenal of Terrestrial Isopods: Focus on Armadillidins, a New Crustacean AMP Family
Q46282722Signal, Uncertainty, and Conflict in Phylogenomic Data for a Diverse Lineage of Microbial Eukaryotes (Diatoms, Bacillariophyta).
Q38434282Signatures of co-evolutionary host-pathogen interactions in the genome of the entomopathogenic nematode Steinernema carpocapsae.
Q92421494Single Stranded DNA Viruses Associated with Capybara Faeces Sampled in Brazil
Q90521859Single cell ecogenomics reveals mating types of individual cells and ssDNA viral infections in the smallest photosynthetic eukaryotes
Q38810987Single-Copy Genes as Molecular Markers for Phylogenomic Studies in Seed Plants
Q33741813Single-cell genomics reveal low recombination frequencies in freshwater bacteria of the SAR11 clade
Q36178838Single-cell genomics-based analysis of virus-host interactions in marine surface bacterioplankton
Q91328358Single-cell transcriptome sequencing of rumen ciliates provides insight into their molecular adaptations to the anaerobic and carbohydrate-rich rumen microenvironment
Q39114629Sinu virus, a novel and divergent orthomyxovirus related to members of the genus Thogotovirus isolated from mosquitoes in Colombia
Q36669967Site-Directed Mutagenesis from Arg195 to His of a Microalgal Putatively Chloroplastidial Glycerol-3-Phosphate Acyltransferase Causes an Increase in Phospholipid Levels in Yeast
Q28654574Six subgroups and extensive recent duplications characterize the evolution of the eukaryotic tubulin protein family
Q28654889Small but powerful, the primary endosymbiont of moss bugs, Candidatus Evansia muelleri, holds a reduced genome with large biosynthetic capabilities
Q28296073Small, smaller, smallest: the origins and evolution of ancient dual symbioses in a Phloem-feeding insect
Q48095607Solar-panel and parasol strategies shape the proteorhodopsin distribution pattern in marine Flavobacteriia
Q38810978SpartaABC: a web server to simulate sequences with indel parameters inferred using an approximate Bayesian computation algorithm
Q38647083Spatiotemporal regulation of nervous system development in the annelid Capitella teleta
Q33559999Spicule formation in calcareous sponges: Coordinated expression of biomineralization genes and spicule-type specific genes
Q34007309Spy: a new group of eukaryotic DNA transposons without target site duplications
Q92963165Stable distinct core eukaryotic viromes in different mosquito species from Guadeloupe, using single mosquito viral metagenomics
Q33914867Statoviruses, A novel taxon of RNA viruses present in the gastrointestinal tracts of diverse mammals
Q35617071Step-wise and lineage-specific diversification of plant RNA polymerase genes and origin of the largest plant-specific subunits
Q40422968Stepwise Functional Evolution in a Fungal Sugar Transporter Family
Q92754518Stepwise evolution and convergent recombination underlie the global dissemination of carbapenemase-producing Escherichia coli
Q42776798Sterol Composition and Biosynthetic Genes of Vitrella brassicaformis, a Recently Discovered Chromerid: Comparison to Chromera velia and Phylogenetic Relationship with Apicomplexan Parasites
Q111741780Streptomyces griseicoloratus sp. nov., isolated from soil in cotton fields in Xinjiang, China
Q35606396Streptophyte phytochromes exhibit an N-terminus of cyanobacterial origin and a C-terminus of proteobacterial origin
Q27316494Structural and functional analysis of the finished genome of the recently isolated toxic Anabaena sp. WA102.
Q90356405Structural and functional characterization of an intradiol ring-cleavage dioxygenase from the polyphagous spider mite herbivore Tetranychus urticae Koch
Q90714108Structural basis for substrate and product recognition in human phosphoglucomutase-1 (PGM1) isoform 2, a member of the α-D-phosphohexomutase superfamily
Q30152741Structural basis for the CsrA-dependent modulation of translation initiation by an ancient regulatory protein
Q92039838Structure and evolution of the 4-helix bundle domain of Zuotin, a J-domain protein co-chaperone of Hsp70
Q36036215Structure and evolutionary history of a large family of NLR proteins in the zebrafish
Q28543091Structure of mycobacterial maltokinase, the missing link in the essential GlgE-pathway
Q50320566Study of the Metatranscriptome of Eight Social and Solitary Wild Bee Species Reveals Novel Viruses and Bee Parasites.
Q46515317Studying Evolutionary Dynamics of Gene Families Encoding SUMO-Activating Enzymes with SeaView and ProtTest
Q92662200Subchromosome-Scale Nuclear and Complete Mitochondrial Genome Characteristics of Morchella crassipes
Q37713949Substitutions near the hemagglutinin receptor-binding site determine the antigenic evolution of influenza A H3N2 viruses in U.S. swine
Q42960313Successive gain of insulator proteins in arthropod evolution
Q46940925Sulcozoa revealed as a paraphyletic group in mitochondrial phylogenomics
Q92094009Sulfonate-based networks between eukaryotic phytoplankton and heterotrophic bacteria in the surface ocean
Q28830604Surprisingly rich repertoire of Wnt genes in the demosponge Halisarca dujardini
Q89791842Symbiont replacements reset the co-evolutionary relationship between insects and their heritable bacteria
Q41096420Systematic Search for Evidence of Interdomain Horizontal Gene Transfer from Prokaryotes to Oomycete Lineages.
Q35302259Systematic exploration of guide-tree topology effects for small protein alignments
Q42710823TRT, a Vertebrate and Protozoan Tc1-Like Transposon: Current Activity and Horizontal Transfer
Q90288424TaAPO-A1, an ortholog of rice ABERRANT PANICLE ORGANIZATION 1, is associated with total spikelet number per spike in elite European hexaploid winter wheat (Triticum aestivum L.) varieties
Q58803877Tangled history of a multigene family: The evolution of ISOPENTENYLTRANSFERASE genes
Q28254627Taxon-rich phylogenomic analyses resolve the eukaryotic tree of life and reveal the power of subsampling by sites
Q61804746Taxon-specific expansion and loss of tektins inform metazoan ciliary diversity
Q89820498Taxonomic Organization of the Family Brucellaceae Based on a Phylogenomic Approach
Q40539269Taxonomy proposal for Old World monkey adenoviruses: characterisation of several non-human, non-ape primate adenovirus lineages
Q55034712Teleost Fish-Specific Preferential Retention of Pigmentation Gene-Containing Families After Whole Genome Duplications in Vertebrates.
Q93024760Terpene Synthase Genes Originated from Bacteria through Horizontal Gene Transfer Contribute to Terpenoid Diversity in Fungi
Q40823541Testing for universal common ancestry
Q57801262Tfo belongs to HmuY-like family of proteins but differs in heme-binding properties
Q38631170The Adaptive Evolution Database (TAED): A New Release of a Database of Phylogenetically Indexed Gene Families from Chordates.
Q37728169The Anti-Oxidant Defense System of the Marine Polar Ciliate Euplotes nobilii: Characterization of the MsrB Gene Family
Q53978748The Apicomplexa-specific glucosamine-6-phosphate N-acetyltransferase gene family encodes a key enzyme for glycoconjugate synthesis with potential as therapeutic target
Q51146010The Birth and Death of Olfactory Receptor Gene Families in Mammalian Niche Adaptation.
Q60921405The Challenges of Analysing Highly Diverse Picobirnavirus Sequence Data
Q37465499The Complete Mitochondrial Genome of Aleurocanthus camelliae: Insights into Gene Arrangement and Genome Organization within the Family Aleyrodidae
Q92289713The Discovery of Twenty-Eight New Encapsulin Sequences, Including Three in Anammox Bacteria
Q40355910The Distant Siblings-A Phylogenomic Roadmap Illuminates the Origins of Extant Diversity in Fungal Aromatic Polyketide Biosynthesis.
Q54867190The Ditylenchus destructor genome provides new insights into the evolution of plant parasitic nematodes.
Q46082759The Dynamic Evolutionary History of Pancrustacean Eyes and Opsins
Q59349730The Ecological Significance and Implications of Transovarial Transmission among the Vector-Borne Bunyaviruses: A Review
Q64244058The Environment and Cyanophage Diversity: Insights From Environmental Sequencing of DNA Polymerase
Q90556902The Evolutionary History of Ephs and Ephrins: Toward Multicellular Organisms
Q36156299The Evolutionary History of R2R3-MYB Proteins Across 50 Eukaryotes: New Insights Into Subfamily Classification and Expansion.
Q90194599The Expanded SWEET Gene Family Following Whole Genome Triplication in Brassica rapa
Q92550435The GMC superfamily of oxidoreductases revisited: analysis and evolution of fungal GMC oxidoreductases
Q34997600The GPCR repertoire in the demosponge Amphimedon queenslandica: insights into the GPCR system at the early divergence of animals
Q55004831The Genome Sequence of "Candidatus Fokinia solitaria": Insights on Reductive Evolution in Rickettsiales.
Q36088660The Glutathione-S-Transferase, Cytochrome P450 and Carboxyl/Cholinesterase Gene Superfamilies in Predatory Mite Metaseiulus occidentalis
Q41473433The Green Berry Consortia of the Sippewissett Salt Marsh: Millimeter-Sized Aggregates of Diazotrophic Unicellular Cyanobacteria
Q41889036The Huperzia selago Shoot Tip Transcriptome Sheds New Light on the Evolution of Leaves
Q39593552The Identification of the Closest Living Relative(s) of Tetrapods: Phylogenomic Lessons for Resolving Short Ancient Internodes
Q91802216The Isolation of New Pore-Forming Toxins from the Sea Anemone Actinia fragacea Provides Insights into the Mechanisms of Actinoporin Evolution
Q27346640The Lungfish Transcriptome: A Glimpse into Molecular Evolution Events at the Transition from Water to Land
Q41092099The LysM receptor-like kinase SlLYK10 regulates the arbuscular mycorrhizal symbiosis in tomato
Q36160337The Mitochondrial Genomes of the Zoonotic Canine Filarial Parasites Dirofilaria (Nochtiella) repens and Candidatus Dirofilaria (Nochtiella) Honkongensis Provide Evidence for Presence of Cryptic Species
Q99419536The Molecular Machinery of Gametogenesis in Geodia Demosponges (Porifera): Evolutionary Origins of a Conserved Toolkit across Animals
Q35687925The Origin and Evolution of Baeyer-Villiger Monooxygenases (BVMOs): An Ancestral Family of Flavin Monooxygenases.
Q35667460The Orphan Gene dauerless Regulates Dauer Development and Intraspecific Competition in Nematodes by Copy Number Variation
Q98394700The P-glycoprotein repertoire of the equine parasitic nematode Parascaris univalens
Q44418211The P450 enzyme Shade mediates the hydroxylation of ecdysone to 20-hydroxyecdysone in the Colorado potato beetle, Leptinotarsa decemlineata
Q35654553The Plastid Genome of the Cryptomonad Teleaulax amphioxeia
Q30656959The Rise and Fall of TRP-N, an Ancient Family of Mechanogated Ion Channels, in Metazoa
Q55251083The Sole DEAD-Box RNA Helicase of the Gastric Pathogen Helicobacter pylori Is Essential for Colonization.
Q42423914The Unicellular Ancestry of Groucho-Mediated Repression and the Origins of Metazoan Transcription Factors
Q92859195The Unique Antimicrobial Recognition and Signaling Pathways in Tardigrades with a Comparison Across Ecdysozoa
Q35847768The Utility of Genome Skimming for Phylogenomic Analyses as Demonstrated for Glycerid Relationships (Annelida, Glyceridae).
Q55193718The annotation of repetitive elements in the genome of channel catfish (Ictalurus punctatus).
Q38787437The apicoplast genomes of two taxonomic units of Babesia from sheep
Q111347085The basic helix–loop–helix transcription factors in the Colorado potato beetle Leptinotarsa decemlineata
Q92189868The carbonic anhydrase of Clostridium autoethanogenum represents a new subclass of β-carbonic anhydrases
Q37428424The characterization of sponge NLRs provides insight into the origin and evolution of this innate immune gene family in animals
Q89072997The complete chloroplast genome of the green algae Hariotina reticulata (Scenedesmaceae, Sphaeropleales, Chlorophyta)
Q36200754The complete mitochondrial genome of Anoplocephala perfoliata, the first representative for the family Anoplocephalidae
Q90178633The complete mitochondrial genome of Calyptogena marissinica (Heterodonta: Veneroida: Vesicomyidae): Insight into the deep-sea adaptive evolution of vesicomyids
Q34351680The complete mitochondrial genome of Solemya velum (Mollusca: Bivalvia) and its relationships with conchifera
Q28657684The complete mitochondrial genome of the booklouse, Liposcelis decolor: insights into gene arrangement and genome organization within the genus Liposcelis
Q100941112The complete mitochondrial genome of the sand bubbler crab Scopimera globosa and its phylogenetic position
Q39439577The complete mitochondrial genome of the tapeworm Cladotaenia vulturi (Cestoda: Paruterinidae): gene arrangement and phylogenetic relationships with other cestodes
Q51192955The complete mitochondrial genomes of deep-sea squid (Bathyteuthis abyssicola), bob-tail squid (Semirossia patagonica) and four giant cuttlefish (Sepia apama, S. latimanus, S. lycidas and S. pharaonis), and their application to the phylogenetic anal
Q37430078The complex evolutionary dynamics of Hsp70s: a genomic and functional perspective
Q42630006The complex evolutionary history of seeing red: molecular phylogeny and the evolution of an adaptive visual system in deep-sea dragonfishes (Stomiiformes: Stomiidae).
Q34416680The comprehensive analysis of DEG/ENaC subunits in Hydra reveals a large variety of peptide-gated channels, potentially involved in neuromuscular transmission
Q30811241The cytochrome P450 genes of channel catfish: their involvement in disease defense responses as revealed by meta-analysis of RNA-Seq data sets
Q36954497The discovery of Foxl2 paralogs in chondrichthyan, coelacanth and tetrapod genomes reveals an ancient duplication in vertebrates.
Q37510391The discovery of phiAGATE, a novel phage infecting Bacillus pumilus, leads to new insights into the phylogeny of the subfamily Spounavirinae.
Q35786038The diversification of PHIS transposon superfamily in eukaryotes
Q37616507The diversity of prokaryotic DDE transposases of the mutator superfamily, insertion specificity, and association with conjugation machineries
Q42470428The dynamically evolving nematocyst content of an anthozoan, a scyphozoan, and a hydrozoan
Q28248746The early expansion and evolutionary dynamics of POU class genes
Q35081193The eukaryotic ancestor had a complex ubiquitin signaling system of archaeal origin
Q33753409The evolution and appearance of C3 duplications in fish originate an exclusive teleost c3 gene form with anti-inflammatory activity
Q57898893The evolution and expression of panarthropod frizzled genes
Q21134722The evolution of extracellular fibrillins and their functional domains
Q35898525The evolution of heat shock protein sequences, cis-regulatory elements, and expression profiles in the eusocial Hymenoptera.
Q89639147The evolution of protein domain repertoires: Shedding light on the origins of the Herpesviridae family
Q38981261The evolution of reactive oxygen species metabolism.
Q48606922The evolution of reproduction-related NLRP genes.
Q52618822The evolution, distribution and diversity of endogenous circoviral elements in vertebrate genomes.
Q48344332The evolutionary characteristics and structural biology of Gallus toll-like receptor 21.
Q52606329The evolutionary history of vertebrate RNA viruses.
Q33987571The evolutionary origin of epithelial cell-cell adhesion mechanisms
Q58137183The female and male mitochondrial genomes of Unio delphinus and the phylogeny of freshwater mussels (Bivalvia: Unionida)
Q36319137The first complete mitogenome of the South China deep-sea giant isopod Bathynomus sp. (Crustacea: Isopoda: Cirolanidae) allows insights into the early mitogenomic evolution of isopods
Q30570963The futalosine pathway played an important role in menaquinone biosynthesis during early prokaryote evolution
Q35588729The gene YALI0E20207g from Yarrowia lipolytica encodes an N-acetylglucosamine kinase implicated in the regulated expression of the genes from the N-acetylglucosamine assimilatory pathway
Q36642232The genetic architecture of degenerin/epithelial sodium channels in Drosophila
Q49796452The genome of Austrofundulus limnaeus offers insights into extreme vertebrate stress tolerance and embryonic development.
Q33556693The genome of Cardinium cBtQ1 provides insights into genome reduction, symbiont motility, and its settlement in Bemisia tabaci
Q91386196The genome of a subterrestrial nematode reveals adaptations to heat
Q89280556The genome of tapeworm Taenia multiceps sheds light on understanding parasitic mechanism and control of coenurosis disease
Q57167930The genome of the biting midge Culicoides sonorensis and gene expression analyses of vector competence for bluetongue virus
Q56654641The genome of the golden apple snail Pomacea canaliculata provides insight into stress tolerance and invasive adaptation
Q36605903The genome of the miiuy croaker reveals well-developed innate immune and sensory systems
Q36991107The genome of the yellow potato cyst nematode, Globodera rostochiensis, reveals insights into the basis of parasitism and virulence.
Q28595417The genome, transcriptome, and proteome of the nematode Steinernema carpocapsae: evolutionary signatures of a pathogenic lifestyle
Q34378530The human gut and groundwater harbor non-photosynthetic bacteria belonging to a new candidate phylum sibling to Cyanobacteria
Q52340619The kinetoplastid-infecting Bodo saltans virus (BsV), a window into the most abundant giant viruses in the sea.
Q34523435The logic of DNA replication in double-stranded DNA viruses: insights from global analysis of viral genomes
Q36051608The maize fused leaves1 (fdl1) gene controls organ separation in the embryo and seedling shoot and promotes coleoptile opening
Q95642717The mitochondrial genome of Acrobeloides varius (Cephalobomorpha) confirms non-monophyly of Tylenchina (Nematoda)
Q37359588The mitochondrial genome of Protostrongylus rufescens - implications for population and systematic studies.
Q39602479The mitochondrial genome of the Cinnamon Bittern, Ixobrychus cinnamomeus (Pelecaniformes: Ardeidae): sequence, structure and phylogenetic analysis.
Q48052335The mitochondrial genome of the arbuscular mycorrhizal fungus Gigaspora margarita reveals two unsuspected trans-splicing events of group I introns
Q42369620The mitochondrial genome of the plant-pathogenic fungus Stemphylium lycopersici uncovers a dynamic structure due to repetitive and mobile elements.
Q37694071The nuclear F-actin interactome of Xenopus oocytes reveals an actin-bundling kinesin that is essential for meiotic cytokinesis.
Q36251665The pangenome of (Antarctic) Pseudoalteromonas bacteria: evolutionary and functional insights
Q33390848The phylogenetics of the global population of potato virus Y and its necrogenic recombinants
Q28595887The phylogeny of C/S1 bZIP transcription factors reveals a shared algal ancestry and the pre-angiosperm translational regulation of S1 transcripts
Q28285168The placental mammal ancestor and the post-K-Pg radiation of placentals
Q35604287The plant Polycomb repressive complex 1 (PRC1) existed in the ancestor of seed plants and has a complex duplication history
Q46248767The presence of genes encoding enzymes that digest carbohydrates in coral genomes and analysis of their activities
Q38633552The purplish bifurcate mussel Mytilisepta virgata gene expression atlas reveals a remarkable tissue functional specialization
Q90026473The quagga mussel genome and the evolution of freshwater tolerance
Q36072827The recombination dynamics of Staphylococcus aureus inferred from spA gene
Q33929005The rice endophyte Harpophora oryzae genome reveals evolution from a pathogen to a mutualistic endophyte.
Q86523292The rice resistance protein pair RGA4/RGA5 recognizes the Magnaporthe oryzae effectors AVR-Pia and AVR1-CO39 by direct binding
Q38816124The role of defensive ecological interactions in the evolution of conotoxins.
Q36967239The role of the glucose-sensing transcription factor carbohydrate-responsive element-binding protein pathway in termite queen fertility
Q93009644The round goby genome provides insights into mechanisms that may facilitate biological invasions
Q30422021The salmonid myostatin gene family: a novel model for investigating mechanisms that influence duplicate gene fate
Q35047541The secreted proteins of Achlya hypogyna and Thraustotheca clavata identify the ancestral oomycete secretome and reveal gene acquisitions by horizontal gene transfer
Q59807358The sp. PCC 6803 Genome Encodes Up to Four 2-Phosphoglycolate Phosphatases
Q28652543The transcriptome of an amphioxus, Asymmetron lucayanum, from the Bahamas: a window into chordate evolution
Q94565324The ubiquity and coexistence of two FBPases in chloroplasts of photosynthetic eukaryotes and its evolutionary and functional implications
Q36976771The unique hmuY gene sequence as a specific marker of Porphyromonas gingivalis
Q58762767The unusual flagellar-targeting mechanism and functions of the trypanosome ortholog of the ciliary GTPase Arl13b
Q45341086The velamen protects photosynthetic orchid roots against UV-B damage, and a large dated phylogeny implies multiple gains and losses of this function during the Cenozoic
Q50206613Three rings for the evolution of plastid shape: a tale of land plant FtsZ.
Q34991033Three-dimensional structure of a protozoal double-stranded RNA virus that infects the enteric pathogen Giardia lamblia
Q28596149Tobamoviruses have probably co-diverged with their eudicotyledonous hosts for at least 110 million years
Q36732809Tofla virus: A newly identified Nairovirus of the Crimean-Congo hemorrhagic fever group isolated from ticks in Japan
Q38718344Toll-like receptor pathway evolution in deuterostomes
Q47548504Tomato Apical Leaf Curl Virus: A Novel, Monopartite Geminivirus Detected in Tomatoes in Argentina.
Q64116956Tomato Chlorotic Spot Virus (TCSV) Putatively Incorporated a Genomic Segment of Groundnut Ringspot Virus (GRSV) Upon a Reassortment Event
Q38626294Torix group Rickettsia are widespread in Culicoides biting midges (Diptera: Ceratopogonidae), reach high frequency and carry unique genomic features
Q30317936Toward a comprehensive phylogenetic reconstruction of the evolutionary history of mitogen-activated protein kinases in the plant kingdom
Q36752817Tracing back the nascence of a new sex-determination pathway to the ancestor of bees and ants.
Q35842957Transcription analysis of neonicotinoid resistance in Mediterranean (MED) populations of B. tabaci reveal novel cytochrome P450s, but no nAChR mutations associated with the phenotype
Q59789341Transcription factor DUO1 generated by neo-functionalization is associated with evolution of sperm differentiation in plants
Q88503208Transcriptional profiling of the CAM plant Agave salmiana reveals conservation of a genetic program for regeneration
Q35069317Transcriptional regulation of two conceptus interferon tau genes expressed in Japanese black cattle during peri-implantation period
Q36881637Transcriptome Analysis of Scrippsiella trochoidea CCMP 3099 Reveals Physiological Changes Related to Nitrate Depletion
Q34927743Transcriptome deep-sequencing and clustering of expressed isoforms from Favia corals
Q36064172Transcriptome sequencing and marker development in winged bean (Psophocarpus tetragonolobus; Leguminosae).
Q70201855Transcriptome-wide dynamics of extensive m
Q55261996Transcriptomic Analysis of Pseudoscorpion Venom Reveals a Unique Cocktail Dominated by Enzymes and Protease Inhibitors.
Q28657955Transcriptomic analysis reveals evidence for a cryptic plastid in the colpodellid Voromonas pontica, a close relative of chromerids and apicomplexan parasites
Q64266559Transcriptomics Identifies Modules of Differentially Expressed Genes and Novel Cyclotides in
Q92642287Transgenic Testing Does Not Support a Role for Additional Candidate Genes in Wolbachia Male Killing or Cytoplasmic Incompatibility
Q42058151Transient expression of hemagglutinin antigen from low pathogenic avian influenza A (H7N7) in Nicotiana benthamiana
Q35236846Transient hypermutagenesis accelerates the evolution of legume endosymbionts following horizontal gene transfer.
Q34007229Transposable element dynamics among asymbiotic and ectomycorrhizal Amanita fungi.
Q91940701Tree shape-based approaches for the comparative study of cophylogeny
Q52308831Trypanosomal mitochondrial intermediate peptidase does not behave as a classical mitochondrial processing peptidase.
Q92697456Two Independent Plastid accD Transfers to the Nuclear Genome of Gnetum and Other Insights on Acetyl-CoA Carboxylase Evolution in Gymnosperms
Q35074478Two different rickettsial bacteria invading Volvox carteri
Q52690142Two essential Thioredoxins mediate apicoplast biogenesis, protein import, and gene expression in Toxoplasma gondii.
Q35082699Two-pore channels provide insight into the evolution of voltage-gated Ca2+ and Na+ channels.
Q91839208UPObase: an online database of unspecific peroxygenases
Q36665172UbSRD: The Ubiquitin Structural Relational Database
Q28285762Ultrafast approximation for phylogenetic bootstrap
Q36231638Unbiased RNA Shotgun Metagenomics in Social and Solitary Wild Bees Detects Associations with Eukaryote Parasites and New Viruses
Q38690634Uncovering missing pieces: duplication and deletion history of arrestins in deuterostomes
Q28553050Under-Expression of Chemosensory Genes in Domiciliary Bugs of the Chagas Disease Vector Triatoma brasiliensis
Q40269973Unexpected ancient paralogs and an evolutionary model for the COPII coat complex
Q55340568Unexpected invasion of miniature inverted-repeat transposable elements in viral genomes.
Q46659529Unraveling the evolution and regulation of the alternative oxidase gene family in plants
Q38675651Unraveling the genetic diversity and phylogeny of Leishmania RNA virus 1 strains of infected Leishmania isolates circulating in French Guiana
Q92636391Unravelling the Single-Stranded DNA Virome of the New Zealand Blackfly
Q64275271Unveiling the Kinomes of and Empowers the Discovery of New Kinase Targets and Antileishmanial Compounds
Q36381881Utilization of Dioxygen by Carotenoid Cleavage Oxygenases
Q59888892VESPA: Very large-scale Evolutionary and Selective Pressure Analyses
Q35875342VapD in Xylella fastidiosa Is a Thermostable Protein with Ribonuclease Activity
Q36141118Variation in opsin genes correlates with signalling ecology in North American fireflies
Q33753985Variation in the Genetic Repertoire of Viruses Infecting Micromonas pusilla Reflects Horizontal Gene Transfer and Links to Their Environmental Distribution
Q40261996Venom Gland Transcriptomic and Proteomic Analyses of the Enigmatic Scorpion Superstitionia donensis (Scorpiones: Superstitioniidae), with Insights on the Evolution of Its Venom Components
Q36621255Venom gland transcriptome analyses of two freshwater stingrays (Myliobatiformes: Potamotrygonidae) from Brazil.
Q41569566Venomics of Remipede Crustaceans Reveals Novel Peptide Diversity and Illuminates the Venom's Biological Role.
Q58797681Viral and metabolic controls on high rates of microbial sulfur and carbon cycling in wetland ecosystems
Q91580575Virome Diversity Correlates with Intestinal Microbiome Diversity in Adult Monozygotic Twins
Q45137958Virome analysis of two sympatric bat species (Desmodus rotundus and Molossus molossus) in French Guiana
Q54251426Virulence factors of Moraxella catarrhalis outer membrane vesicles are major targets for cross-reactive antibodies and have adapted during evolution.
Q93007274Virus Discovery in Desert Tortoise Fecal Samples: Novel Circular Single-Stranded DNA Viruses
Q58585556Visualization-assisted binning of metagenome assemblies reveals potential new pathogenic profiles in idiopathic travelers' diarrhea
Q46980059Visualizing the GPCR Network: Classification and Evolution.
Q36433401Vitamin B(12) synthesis and salvage pathways were acquired by horizontal gene transfer to the Thermotogales
Q39846291W-IQ-TREE: a fast online phylogenetic tool for maximum likelihood analysis
Q58605271WRKY transcription factors in legumes
Q90549808What lies beneath: Hydra provides cnidarian perspectives into the evolution of FGFR docking proteins
Q99616703Whitefly genomes contain ribotoxin coding genes acquired from plants
Q38684199Whole Genome Sequence of the Heterozygous Clinical Isolate Candida krusei 81-B-5.
Q28552799Whole Genome Sequencing Allows Better Understanding of the Evolutionary History of Leptospira interrogans Serovar Hardjo
Q21090726Whole genome duplication and enrichment of metal cation transporters revealed by de novo genome sequencing of extremely halotolerant black yeast Hortaea werneckii
Q34992772Whole genome duplication events in plant evolution reconstructed and predicted using myosin motor proteins
Q40696181Wolbachia from Drosophila incompta: just a hitchhiker shared by Drosophila in the New and Old World?
Q29305163Xenacoelomorpha is the sister group to Nephrozoa
Q33611499Zearalenone lactonohydrolase activity in Hypocreales and its evolutionary relationships within the epoxide hydrolase subset of a/b-hydrolases
Q38727034Zinc Cluster Transcription Factors Alter Virulence in Candida albicans
Q39926232Zinc finger protein rotund deficiency affects development of the thoracic leg in Bombyx mori
Q36947989gEVE: a genome-based endogenous viral element database provides comprehensive viral protein-coding sequences in mammalian genomes
Q28600854miRNA Repertoires of Demosponges Stylissa carteri and Xestospongia testudinaria
Q37123070pA506, a conjugative plasmid of the plant epiphyte Pseudomonas fluorescens A506
Q36347226phylo-node: A molecular phylogenetic toolkit using Node.js

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