| scholarly article | Q13442814 |
| P819 | ADS bibcode | 2006PNAS..10316117Q |
| P356 | DOI | 10.1073/PNAS.0606149103 |
| P932 | PMC publication ID | 1616942 |
| P698 | PubMed publication ID | 17050688 |
| P5875 | ResearchGate publication ID | 6744488 |
| P2093 | author name string | Anne Mulichak | |
| Carrie Hiser | |||
| Ling Qin | |||
| R Michael Garavito | |||
| Shelagh Ferguson-Miller | |||
| P2860 | cites work | Evidence for a copper-coordinated histidine-tyrosine cross-link in the active site of cytochrome oxidase | Q41852661 |
| Membrane potential-controlled inhibition of cytochrome c oxidase by zinc | Q43879377 | ||
| The entry point of the K-proton-transfer pathway in cytochrome c oxidase | Q44114463 | ||
| A role for subunit III in proton uptake into the D pathway and a possible proton exit pathway in Rhodobacter sphaeroides cytochrome c oxidase | Q44479672 | ||
| Slow proton transfer through the pathways for pumped protons in cytochrome c oxidase induces suicide inactivation of the enzyme | Q46392917 | ||
| Non-proline cis peptide bonds in proteins. | Q52225116 | ||
| Proton transfer in cytochrome bo3 ubiquinol oxidase of Escherichia coli: second-site mutations in subunit I that restore proton pumping in the mutant Asp135-->Asn. | Q54614091 | ||
| Site-directed mutagenesis of highly conserved residues in helix VIII of subunit I of the cytochrome bo ubiquinol oxidase from Escherichia coli: an amphipathic transmembrane helix that may be important in conveying protons to the binuclear center. | Q54649649 | ||
| Oxygen and proton pathways in cytochrome c oxidase | Q56272088 | ||
| Tryptophan 121 of Subunit II Is the Electron Entry Site to Cytochrome-cOxidase inParacoccus denitrificans | Q58070533 | ||
| Oxygen activation and reduction in respiration: involvement of redox-active tyrosine 244 | Q73220921 | ||
| Suicide inactivation of cytochrome c oxidase: catalytic turnover in the absence of subunit III alters the active site | Q73248232 | ||
| Definition of the interaction domain for cytochrome c on cytochrome c oxidase. I. Biochemical, spectral, and kinetic characterization of surface mutants in subunit ii of Rhodobacter sphaeroides cytochrome aa(3) | Q73297608 | ||
| Definition of the interaction domain for cytochrome c on cytochrome c oxidase. Ii. Rapid kinetic analysis of electron transfer from cytochrome c to Rhodobacter sphaeroides cytochrome oxidase surface mutants | Q73297612 | ||
| Inhibition of proton transfer in cytochrome c oxidase by zinc ions: delayed proton uptake during oxygen reduction | Q74703155 | ||
| Heme/Copper Terminal Oxidases | Q77646446 | ||
| The low-spin heme of cytochrome c oxidase as the driving element of the proton-pumping process | Q24618807 | ||
| Structure at 2.7 A resolution of the Paracoccus denitrificans two-subunit cytochrome c oxidase complexed with an antibody FV fragment | Q24657440 | ||
| Structure of bacteriorhodopsin at 1.55 A resolution | Q27619432 | ||
| Structural investigations of the active-site mutant Asn156Ala of outer membrane phospholipase A: Function of the Asn-His interaction in the catalytic triad | Q27634959 | ||
| Functional role of internal water molecules in rhodopsin revealed by X-ray crystallography. | Q27638895 | ||
| The X-ray crystal structures of wild-type and EQ(I-286) mutant cytochrome c oxidases from Rhodobacter sphaeroides | Q27639427 | ||
| The whole structure of the 13-subunit oxidized cytochrome c oxidase at 2.8 A | Q27732721 | ||
| Redox-coupled crystal structural changes in bovine heart cytochrome c oxidase | Q27758647 | ||
| Proton pump coupled to cytochrome c oxidase in mitochondria | Q28646276 | ||
| C-terminal truncation and histidine-tagging of cytochrome c oxidase subunit II reveals the native processing site, shows involvement of the C-terminus in cytochrome c binding, and improves the assay for proton pumping | Q30666492 | ||
| The preference of tryptophan for membrane interfaces. | Q31997161 | ||
| Mass spectrometric detection of protein, lipid and heme components of cytochrome c oxidase from R. sphaeroides and the stabilization of non-covalent complexes from the enzyme | Q33202140 | ||
| Possible proton relay pathways in cytochrome c oxidase | Q34636365 | ||
| Structure at 2.8 Å resolution of cytochrome c oxidase from Paracoccus denitrificans | Q34662350 | ||
| A defined protein-detergent-lipid complex for crystallization of integral membrane proteins: The cytochrome b6f complex of oxygenic photosynthesis. | Q34982218 | ||
| Understanding the mechanism of proton movement linked to oxygen reduction in cytochrome c oxidase: lessons from other proteins | Q35146225 | ||
| The influence of subunit III of cytochrome c oxidase on the D pathway, the proton exit pathway and mechanism-based inactivation in subunit I. | Q35752171 | ||
| Lipids in membrane protein structures | Q35935371 | ||
| Specific protein-lipid interactions in membrane proteins | Q36295262 | ||
| Lipid and subunit III depleted cytochrome c oxidase purified by horse cytochrome c affinity chromatography in lauryl maltoside | Q38354677 | ||
| Definition of the interaction domain for cytochrome c on cytochrome c oxidase. III. Prediction of the docked complex by a complete, systematic search | Q41710393 | ||
| P433 | issue | 44 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | membrane protein | Q423042 |
| P304 | page(s) | 16117-16122 | |
| P577 | publication date | 2006-10-18 | |
| P1433 | published in | Proceedings of the National Academy of Sciences of the United States of America | Q1146531 |
| P1476 | title | Identification of conserved lipid/detergent-binding sites in a high-resolution structure of the membrane protein cytochrome c oxidase | |
| P478 | volume | 103 |
| Q27651880 | A Conserved Steroid Binding Site in Cytochrome c Oxidase † ‡ |
| Q47727748 | A Water Dimer Shift Activates a Proton Pumping Pathway in the PR → F Transition of ba3 Cytochrome c Oxidase. |
| Q41842908 | A broken-symmetry density functional study of structures, energies, and protonation states along the catalytic O-O bond cleavage pathway in ba3 cytochrome c oxidase from Thermus thermophilus |
| Q38318210 | A conserved amphipathic ligand binding region influences k-path-dependent activity of cytochrome C oxidase |
| Q27644655 | A histidine residue acting as a controlling site for dioxygen reduction and proton pumping by cytochrome c oxidase |
| Q37117512 | A mitochondrial DNA mutation linked to colon cancer results in proton leaks in cytochrome c oxidase |
| Q43122144 | A pathogenic mutation in cytochrome c oxidase results in impaired proton pumping while retaining O(2)-reduction activity |
| Q27653495 | A peroxide bridge between Fe and Cu ions in the O2 reduction site of fully oxidized cytochrome c oxidase could suppress the proton pump |
| Q41763465 | Active site of cytochrome cbb3. |
| Q34858215 | Alternative initial proton acceptors for the D pathway of Rhodobacter sphaeroides cytochrome c oxidase |
| Q27649347 | An unexpected outcome of surface engineering an integral membrane protein: improved crystallization of cytochromeba3fromThermus thermophilus |
| Q37102486 | Analyzing the electrogenicity of cytochrome c oxidase |
| Q37955498 | Biogenesis of cbb(3)-type cytochrome c oxidase in Rhodobacter capsulatus |
| Q35918772 | Broken Symmetry DFT Calculations/Analysis for Oxidized and Reduced Dinuclear Center in Cytochrome c Oxidase: Relating Structures, Protonation States, Energies, and Mössbauer Properties in ba3 Thermus thermophilus |
| Q33866037 | Cardiolipin deficiency in Rhodobacter sphaeroides alters the lipid profile of membranes and of crystallized cytochrome oxidase, but structure and function are maintained |
| Q33427275 | Chapter 28 Use of ruthenium photoreduction techniques to study electron transfer in cytochrome oxidase |
| Q34119860 | Characterizing the proton loading site in cytochrome c oxidase |
| Q27653409 | Combined Microspectrophotometric and Crystallographic Examination of Chemically Reduced and X-ray Radiation-Reduced Forms of Cytochrome ba 3 Oxidase from Thermus thermophilus : Structure of the Reduced Form of the Enzyme † |
| Q33866042 | Combined genetic and metabolic manipulation of lipids in Rhodobacter sphaeroides reveals non-phospholipid substitutions in fully active cytochrome c oxidase |
| Q36163371 | Communication between R481 and Cu(B) in cytochrome bo(3) ubiquinol oxidase from Escherichia coli |
| Q35084946 | Comparative genomics of trace element dependence in biology |
| Q35549335 | Conservation of lipid functions in cytochrome bc complexes |
| Q36673610 | Conserved lipid-binding sites in membrane proteins: a focus on cytochrome c oxidase |
| Q58793798 | Control of transmembrane charge transfer in cytochrome c oxidase by the membrane potential |
| Q28658988 | Copper active sites in biology |
| Q27651824 | Crystal structure of a self-assembling lipopeptide detergent at 1.20 A. |
| Q37614269 | Crystal structures of all-alpha type membrane proteins |
| Q36585114 | Crystallization and crystal properties of squid rhodopsin |
| Q27666469 | Crystallographic and online spectral evidence for role of conformational change and conserved water in cytochrome oxidase proton pump |
| Q34953837 | Crystallographic characterization of N-oxide tripod amphiphiles |
| Q36663543 | Crystallographic location and mutational analysis of Zn and Cd inhibitory sites and role of lipidic carboxylates in rescuing proton path mutants in cytochrome c oxidase |
| Q38133739 | Current advances in research of cytochrome c oxidase |
| Q51739416 | Cytochrome aa3 Oxygen Reductase Utilizes the Tunnel Observed in the Crystal Structures To Deliver O2 for Catalysis. |
| Q33576115 | Cytochrome c oxidase: exciting progress and remaining mysteries |
| Q90363383 | DFT Fea3-O/O-O Vibrational Frequency Calculations over Catalytic Reaction Cycle States in the Dinuclear Center of Cytochrome c Oxidase |
| Q33875968 | Decoupling mutations in the D-channel of the aa(3)-type cytochrome c oxidase from Rhodobacter sphaeroides suggest that a continuous hydrogen-bonded chain of waters is essential for proton pumping |
| Q37585480 | Density functional study for the bridged dinuclear center based on a high-resolution X-ray crystal structure of ba3 cytochrome c oxidase from Thermus thermophilus |
| Q38955724 | Detergents: Friends not foes for high-performance membrane proteomics toward precision medicine. |
| Q35163036 | Differential effects of glutamate-286 mutations in the aa(3)-type cytochrome c oxidase from Rhodobacter sphaeroides and the cytochrome bo(3) ubiquinol oxidase from Escherichia coli. |
| Q38469720 | Dynamics of the beta2-adrenergic G-protein coupled receptor revealed by hydrogen-deuterium exchange |
| Q37088918 | EPR evidence of cyanide binding to the Mn(Mg) center of cytochrome c oxidase: support for Cu(A)-Mg involvement in proton pumping |
| Q42967065 | Electronic continuum model for molecular dynamics simulations of biological molecules |
| Q37096996 | Electronic structure of the ground and excited states of the Cu(A) site by NMR spectroscopy |
| Q41871212 | Evaluation of ion activation strategies and mechanisms for the gas-phase fragmentation of sulfoquinovosyldiacylglycerol lipids from Rhodobacter sphaeroides |
| Q33578173 | Evolution of mitochondria reconstructed from the energy metabolism of living bacteria |
| Q33350451 | Exploration of the cytochrome c oxidase pathway puzzle and examination of the origin of elusive mutational effects |
| Q35926223 | From static structure to living protein: computational analysis of cytochrome c oxidase main-chain flexibility |
| Q34115431 | Functional interactions between membrane-bound transporters and membranes |
| Q37968798 | Gating and regulation of the cytochrome c oxidase proton pump. |
| Q36609135 | Glutamic acid 242 is a valve in the proton pump of cytochrome c oxidase. |
| Q27671514 | High Resolution Structure of the ba3 Cytochrome c Oxidase from Thermus thermophilus in a Lipidic Environment |
| Q27654918 | High resolution crystal structure of Paracoccus denitrificans cytochrome c oxidase: new insights into the active site and the proton transfer pathways |
| Q33762883 | How hydrogen peroxide is metabolized by oxidized cytochrome c oxidase |
| Q50051643 | Hydrogen-Bonded Network and Water Dynamics in the D-channel of Cytochrome c Oxidase. |
| Q42284981 | Identification of cardiolipin binding sites on cytochrome c oxidase at the entrance of proton channels. |
| Q35022843 | Impaired proton pumping in cytochrome c oxidase upon structural alteration of the D pathway |
| Q37747255 | Improved Model of Proton Pump Crystal Structure Obtained by Interactive Molecular Dynamics Flexible Fitting Expands the Mechanistic Model for Proton Translocation in P-Type ATPases |
| Q80509326 | Inorganic chemistry: uranium gets a reaction |
| Q34652307 | Interconversions of P and F intermediates of cytochrome c oxidase from Paracoccus denitrificans |
| Q24561993 | Internal lipid architecture of the hetero-oligomeric cytochrome b6f complex |
| Q34422851 | Intricate Role of Water in Proton Transport through Cytochrome c Oxidase |
| Q30268440 | Kinetic design of the respiratory oxidases |
| Q37310572 | Kinetic gating of the proton pump in cytochrome c oxidase |
| Q36040403 | Less is More: Membrane Protein Digestion Beyond Urea-Trypsin Solution for Next-level Proteomics |
| Q38221738 | Life at the border: adaptation of proteins to anisotropic membrane environment |
| Q33717503 | Ligand trapping by cytochrome c oxidase: implications for gating at the catalytic center |
| Q30423538 | Lipid functions in cytochrome bc complexes: an odd evolutionary transition in a membrane protein structure |
| Q30155924 | Lipid-binding surfaces of membrane proteins: evidence from evolutionary and structural analysis |
| Q43213345 | Lipid-engineered Escherichia coli membranes reveal critical lipid headgroup size for protein function |
| Q42732315 | Membrane protein stability can be compromised by detergent interactions with the extramembranous soluble domains |
| Q30153435 | Methods for studying interactions of detergents and lipids with α-helical and β-barrel integral membrane proteins |
| Q30394639 | Microscopic basis for kinetic gating in Cytochrome c oxidase: insights from QM/MM analysis |
| Q36162910 | Modulation of the active site conformation by site-directed mutagenesis in cytochrome c oxidase from Paracoccus denitrificans. |
| Q42975917 | Molecular dynamics simulation of water in cytochrome c oxidase reveals two water exit pathways and the mechanism of transport |
| Q64978188 | Molecular mechanism of cardiolipin-mediated assembly of respiratory chain supercomplexes. |
| Q34793679 | Molecular simulations of dodecyl-β-maltoside micelles in water: influence of the headgroup conformation and force field parameters |
| Q42690205 | Multiconformation continuum electrostatics analysis of the effects of a buried Asp introduced near heme a in Rhodobacter sphaeroides cytochrome c oxidase |
| Q41375098 | Mutagenic analysis of Cox11 of Rhodobacter sphaeroides: insights into the assembly of Cu(B) of cytochrome c oxidase |
| Q47652815 | Oxygen Activation and Energy Conservation by Cytochrome c Oxidase. |
| Q27664381 | PagP Crystallized from SDS/Cosolvent Reveals the Route for Phospholipid Access to the Hydrocarbon Ruler |
| Q33822922 | Partial steps of charge translocation in the nonpumping N139L mutant of Rhodobacter sphaeroides cytochrome c oxidase with a blocked D-channel |
| Q46188634 | Phenol-Induced O-O Bond Cleavage in a Low-Spin Heme-Peroxo-Copper Complex: Implications for O2 Reduction in Heme-Copper Oxidases. |
| Q28660353 | Philosophy of voltage-gated proton channels |
| Q42406378 | Phosphatidylethanolamine and cardiolipin differentially affect the stability of mitochondrial respiratory chain supercomplexes |
| Q36120547 | Product-controlled steady-state kinetics between cytochrome aa(3) from Rhodobacter sphaeroides and equine ferrocytochrome c analyzed by a novel spectrophotometric approach |
| Q30319684 | Protein structure modeling indicates hexahistidine-tag interference with enzyme activity |
| Q27697681 | Protein structure. Crystal structures of translocator protein (TSPO) and mutant mimic of a human polymorphism |
| Q36789334 | Proton solvation and transport in aqueous and biomolecular systems: insights from computer simulations |
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| Q41957698 | Proton transfer in the K-channel analog of B-type Cytochrome c oxidase from Thermus thermophilus |
| Q37137110 | Proton-dependent electron transfer from CuA to heme a and altered EPR spectra in mutants close to heme a of cytochrome oxidase |
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| Q27655301 | Redox-Dependent Conformational Changes in Cytochrome c Oxidase Suggest a Gating Mechanism for Proton Uptake |
| Q36477773 | Redox-coupled proton pumping in cytochrome c oxidase: further insights from computer simulation |
| Q36895569 | Role of aspartate 132 at the orifice of a proton pathway in cytochrome c oxidase |
| Q47914262 | Role of conformational change and K-path ligands in controlling cytochrome c oxidase activity. |
| Q36354453 | Role of domain swapping in the hetero-oligomeric cytochrome b6f lipoprotein complex |
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