Dynamic changes in subgraph preference profiles of crucial transcription factors

scientific article

Dynamic changes in subgraph preference profiles of crucial transcription factors is …
instance of (P31):
scholarly articleQ13442814

External links are
P8978DBLP publication IDjournals/ploscb/ZhangLSZLCSZWWC06
P356DOI10.1371/JOURNAL.PCBI.0020047
P932PMC publication ID1458966
P698PubMed publication ID16699597
P5875ResearchGate publication ID7081124

P50authorYong ZhangQ30347460
Runsheng ChenQ46823233
Tao WuQ47451165
P2093author name stringJie Wang
Lan Chen
Geir Skogerbø
Xiaopeng Zhu
Changning Liu
Zhihua Zhang
Baochen Shi
Hongchao Lu
P2860cites workGene ontology: tool for the unification of biologyQ23781406
An extended transcriptional regulatory network of Escherichia coli and analysis of its hierarchical structure and network motifsQ24557485
Formation of regulatory patterns during signal propagation in a Mammalian cellular networkQ24631450
Structure and function of the feed-forward loop network motifQ24683513
Hierarchical structure and modules in the Escherichia coli transcriptional regulatory network revealed by a new top-down approachQ24804022
Transcriptional regulatory networks in Saccharomyces cerevisiaeQ27860846
Network biology: understanding the cell's functional organizationQ27861027
Comment on "Network motifs: simple building blocks of complex networks" and "Superfamilies of evolved and designed networks".Q51991156
Gene duplications in H. influenzaeQ52323754
Transcriptional regulation of the Escherichia coli rhaT geneQ71397727
Topological and causal structure of the yeast transcriptional regulatory networkQ77985187
Both activation and repression of a-mating-type-specific genes in yeast require transcription factor Mcm1.Q27930557
MET4, a leucine zipper protein, and centromere-binding factor 1 are both required for transcriptional activation of sulfur metabolism in Saccharomyces cerevisiaeQ27936410
Network motifs: simple building blocks of complex networksQ29547340
Network motifs in the transcriptional regulation network of Escherichia coliQ29547342
Self-perpetuating states in signal transduction: positive feedback, double-negative feedback and bistabilityQ29619706
Transitive functional annotation by shortest-path analysis of gene expression dataQ30716814
The topological relationship between the large-scale attributes and local interaction patterns of complex networksQ33581367
Inferring network mechanisms: the Drosophila melanogaster protein interaction networkQ33927521
Protein molecules as computational elements in living cellsQ34301876
Efficient sampling algorithm for estimating subgraph concentrations and detecting network motifsQ34303213
Structure and evolution of transcriptional regulatory networksQ34326530
Genomic analysis of regulatory network dynamics reveals large topological changesQ34348943
Motifs, modules and games in bacteriaQ35121904
Generation of oscillations by the p53-Mdm2 feedback loop: a theoretical and experimental studyQ35268497
Design of gene circuits: lessons from bacteriaQ35621367
Genomic analysis of essentiality within protein networksQ35774496
A regulatory cascade in the induction of rhaBAD.Q38314392
Proteins that bind to the yeast rDNA enhancerQ44429444
Gene regulatory network growth by duplicationQ47610427
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P433issue5
P304page(s)e47
P577publication date2006-05-12
P1433published inPLOS Computational BiologyQ2635829
P1476titleDynamic changes in subgraph preference profiles of crucial transcription factors
P478volume2

Reverse relations

cites work (P2860)
Q36715572Accuracy and application of the motif expression decomposition method in dissecting transcriptional regulation
Q33330859Bioinformatics in China: a personal perspective
Q34301632Differences in local genomic context of bound and unbound motifs.
Q30445285Genome-wide analysis of transcriptional dependence and probable target sites for Abf1 and Rap1 in Saccharomyces cerevisiae
Q41761380Investigating the validity of current network analysis on static conglomerate networks by protein network stratification
Q39707414Structural Basis of Specific Binding between Aurora A and TPX2 by Molecular Dynamics Simulations
Q39794961The molecular mechanism studies of chirality effect of PHA-739358 on Aurora kinase A by molecular dynamics simulation and free energy calculations
Q33965509Unraveling gene regulatory networks from time-resolved gene expression data - a measures comparison study

Search more.