| scholarly article | Q13442814 |
| P8978 | DBLP publication ID | journals/bioinformatics/DurinckMKDMBH05 |
| P356 | DOI | 10.1093/BIOINFORMATICS/BTI525 |
| P698 | PubMed publication ID | 16082012 |
| P5875 | ResearchGate publication ID | 7678108 |
| P50 | author | Wolfgang Huber | Q37391155 |
| Yves Moreau | Q55638172 | ||
| Bart De Moor | Q61089673 | ||
| Alvis Brazma | Q29840681 | ||
| Arek Kasprzyk | Q32985026 | ||
| Sean Davis | Q37390205 | ||
| P2093 | author name string | Steffen Durinck | |
| P2860 | cites work | R: A Language for Data Analysis and Graphics | Q56268347 |
| Bioconductor: open software development for computational biology and bioinformatics | Q21194861 | ||
| The Vertebrate Genome Annotation (Vega) database | Q24558564 | ||
| dbSNP: the NCBI database of genetic variation | Q24608672 | ||
| CONREAL web server: identification and visualization of conserved transcription factor binding sites | Q24812255 | ||
| EnsMart: a generic system for fast and flexible access to biological data | Q28776411 | ||
| An extensible application for assembling annotation for genomic data | Q30757743 | ||
| P433 | issue | 16 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | database | Q8513 |
| data analysis | Q1988917 | ||
| P304 | page(s) | 3439-3440 | |
| P577 | publication date | 2005-08-01 | |
| P1433 | published in | Bioinformatics | Q4914910 |
| P1476 | title | BioMart and Bioconductor: a powerful link between biological databases and microarray data analysis | |
| P478 | volume | 21 |
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| Q90707551 | Genetic Architecture of Gene Expression in European and African Americans: An eQTL Mapping Study in GENOA |
| Q98735741 | Genetic Diversity and Selection Signatures Within Diannan Small-Ear Pigs Revealed by Next-Generation Sequencing |
| Q64121072 | Genetic Variation in Pan Species Is Shaped by Demographic History and Harbors Lineage-Specific Functions |
| Q92572333 | Genetic and genomic analyses of latent variables related to the milk fatty acid profile, milk composition, and udder health in dairy cattle |
| Q58779498 | Genetic dissection of bull fertility in US Jersey dairy cattle |
| Q57675375 | Genetic effects on promoter usage are highly context-specific and contribute to complex traits |
| Q61450218 | Genetic effects on promoter usage are highly context-specific and contribute to complex traits |
| Q51274396 | Genetic loci that control the loss and regain of trabecular bone during unloading and reambulation. |
| Q57475935 | Genetic variation in Pan species is shaped by demographic history and underlies lineage-specific functions |
| Q49416326 | Genetical genomics of growth in a chicken model. |
| Q37283287 | GenoQuery: a new querying module for functional annotation in a genomic warehouse |
| Q92002632 | Genome and epigenome wide studies of neurological protein biomarkers in the Lothian Birth Cohort 1936 |
| Q33385390 | Genome data mining for everyone |
| Q35656697 | Genome engineering of isogenic human ES cells to model autism disorders |
| Q92763761 | Genome organization in proximity to the BAP1 locus appears to play a pivotal role in a variety of cancers |
| Q98784525 | Genome-Wide Detection of Selection Signatures in Duroc Revealed Candidate Genes Relating to Growth and Meat Quality |
| Q90411201 | Genome-Wide Epistatic Interaction Networks Affecting Feed Efficiency in Duroc and Landrace Pigs |
| Q90642876 | Genome-Wide Expression Profiling Unveils Autoimmune Response Signatures in the Perivascular Adipose Tissue of Abdominal Aortic Aneurysm |
| Q89327056 | Genome-scale analysis identifies paralog lethality as a vulnerability of chromosome 1p loss in cancer |
| Q91420513 | Genome-wide Associations Reveal Human-Mouse Genetic Convergence and Modifiers of Myogenesis, CPNE1 and STC2 |
| Q101143033 | Genome-wide DNA methylation analysis of cognitive function in middle and old-aged Chinese monozygotic twins |
| Q39800990 | Genome-wide analysis of a G-quadruplex-specific single-chain antibody that regulates gene expression |
| Q33517173 | Genome-wide analysis of alternative splicing in cow: implications in bovine as a model for human diseases |
| Q92284269 | Genome-wide association analysis of 350 000 Caucasians from the UK Biobank identifies novel loci for asthma, hay fever and eczema |
| Q92633285 | Genome-wide association and pathway analysis of carcass and meat quality traits in Piemontese young bulls |
| Q38429385 | Genome-wide association and pathway-based analysis using latent variables related to milk protein composition and cheesemaking traits in dairy cattle. |
| Q38879531 | Genome-wide association mapping and pathway analysis of leukosis incidence in a US Holstein cattle population |
| Q57281734 | Genome-wide association studies and meta-analysis uncovers new candidate genes for growth and carcass traits in pigs |
| Q93163096 | Genome-wide association studies of 74 plasma metabolites of German shepherd dogs reveal two metabolites associated with genes encoding their enzymes |
| Q64065848 | Genome-wide associations and functional gene analyses for endoparasite resistance in an endangered population of native German Black Pied cattle |
| Q90042573 | Genome-wide effects of social status on DNA methylation in the brain of a cichlid fish, Astatotilapia burtoni |
| Q33869396 | Genome-wide footprints of pig domestication and selection revealed through massive parallel sequencing of pooled DNA. |
| Q41811630 | Genome-wide gene expression analysis in response to organophosphorus pesticide chlorpyrifos and diazinon in C. elegans. |
| Q36171157 | Genome-wide gene expression profiling to predict resistance to anthracyclines in breast cancer patients |
| Q103828874 | Genome-wide identification of major genes and genomic prediction using high-density and text-mined gene-based SNP panels in Hanwoo (Korean cattle) |
| Q28703527 | Genome-wide identification, characterization, and expression analysis of lineage-specific genes within zebrafish |
| Q35129119 | Genome-wide targeting of the epigenetic regulatory protein CTCF to gene promoters by the transcription factor TFII-I. |
| Q35147809 | Genome-wide transcriptional profiling of skin and dorsal root ganglia after ultraviolet-B-induced inflammation |
| Q33397624 | GenomeGraphs: integrated genomic data visualization with R |
| Q29577127 | Genomic Annotation Resources in R/Bioconductor |
| Q99727068 | Genomic Prediction Informed by Biological Processes Expands Our Understanding of the Genetic Architecture Underlying Free Amino Acid Traits in Dry Arabidopsis Seeds |
| Q58780831 | Genomic Prediction of Complex Phenotypes Using Genic Similarity Based Relatedness Matrix |
| Q91842427 | Genomic Signatures of Selection along a Climatic Gradient in the Northern Range Margin of the White-Footed Mouse (Peromyscus leucopus) |
| Q58761912 | Genomic analysis reveals genes affecting distinct phenotypes among different Chinese and western pig breeds |
| Q89557124 | Genomic basis for RNA alterations in cancer |
| Q57525358 | Genomic basis for RNA alterations revealed by whole-genome analyses of 27 cancer types |
| Q28752089 | Genomic evidence for non-random endemic populations of decaying exons from mammalian genes |
| Q52926926 | Genomic organization of transcriptomes in mammals: Coregulation and cofunctionality. |
| Q36238742 | Genomic prediction with epistasis models: on the marker-coding-dependent performance of the extended GBLUP and properties of the categorical epistasis model (CE). |
| Q46247518 | Genomic signature of highland adaptation in fish: a case study in Tibetan Schizothoracinae species |
| Q111150092 | Genomic variations and epigenomic landscape of the Medaka Inbred Kiyosu-Karlsruhe (MIKK) panel |
| Q34555096 | Genomics and evolution of protein phosphatases |
| Q97644558 | Genomics of Heat Tolerance in Reproductive Performance Investigated in Four Independent Maternal Lines of Pigs |
| Q91559708 | Genotype-by-environment interaction of fertility traits in Danish Holstein cattle using a single-step genomic reaction norm model |
| Q101570749 | Global assessment of organ specific basal gene expression over a diurnal cycle with analyses of gene copies exhibiting cyclic expression patterns |
| Q28389557 | Global gene expression response of a population exposed to benzene: a pilot study exploring the use of RNA-sequencing technology |
| Q93012478 | Guidelines for using sigQC for systematic evaluation of gene signatures |
| Q99616180 | H3.3G34W promotes growth and impedes differentiation of osteoblast-like mesenchymal progenitors in Giant Cell Tumour of Bone |
| Q101121746 | HDAC3 Mediates the Inflammatory Response and LPS Tolerance in Human Monocytes and Macrophages |
| Q102213176 | Haldane's rule in the placenta: Sex-biased misregulation of the Kcnq1 imprinting cluster in hybrid mice |
| Q42832065 | Head and neck squamous cancer stromal fibroblasts produce growth factors influencing phenotype of normal human keratinocytes |
| Q91825128 | Hepatic gene expression explains primary drug toxicity in bipolar disorder |
| Q34958896 | Hierarchical Bayesian modelling of gene expression time series across irregularly sampled replicates and clusters |
| Q91690826 | High Concentration of Low-Density Lipoprotein Results in Disturbances in Mitochondrial Transcription and Functionality in Endothelial Cells |
| Q34073400 | High-throughput DNA analysis shows the importance of methylation in the control of immune inflammatory gene transcription in chronic periodontitis. |
| Q61228701 | Highly Heritable and Functionally Relevant Breed Differences in Dog Behavior: supplemental information |
| Q90422332 | Highly heritable and functionally relevant breed differences in dog behaviour |
| Q36579111 | Histone acetylation and DNA demethylation of T cells result in an anaplastic large cell lymphoma-like phenotype |
| Q35363365 | Host regulatory network response to infection with highly pathogenic H5N1 avian influenza virus |
| Q37936931 | How do you find transcription factors? Computational approaches to compile and annotate repertoires of regulators for any genome |
| Q47662709 | Human Lung DNA Methylation Quantitative Trait Loci Colocalize with COPD Genome-wide Association Loci |
| Q39341456 | Human PDE4D isoform composition is deregulated in primary prostate cancer and indicative for disease progression and development of distant metastases |
| Q99634616 | Human germinal centres engage memory and naive B cells after influenza vaccination |
| Q43699250 | Human skin transcriptome during superficial cutaneous wound healing. |
| Q37641863 | INsPeCT: INtegrative Platform for Cancer Transcriptomics. |
| Q38390705 | ISPIDER Central: an integrated database web-server for proteomics |
| Q50568006 | Identification and Characterization of Androgen-Responsive Genes in Zebrafish Embryos. |
| Q27310913 | Identification of Chemical Inhibitors of β-Catenin-Driven Liver Tumorigenesis in Zebrafish |
| Q92422004 | Identification of Prognostic Candidate Genes in Breast Cancer by Integrated Bioinformatic Analysis |
| Q33382118 | Identification of Spt5 target genes in zebrafish development reveals its dual activity in vivo |
| Q33687266 | Identification of cis-regulatory elements in the mammalian genome: the cREMaG database |
| Q94603121 | Identification of microRNA-mRNA regulatory networks and pathways related to retinoblastoma across human and mouse |
| Q90448896 | Identification of pivotal lncRNAs in papillary thyroid cancer using lncRNA-mRNA-miRNA ceRNA network analysis |
| Q38453302 | Identification of pleiotropic genes and gene sets underlying growth and immunity traits: a case study on Meishan pigs |
| Q38513883 | Identification of proteins in human substantia nigra |
| Q35070834 | Identification of putative target genes of the transcription factor RUNX2. |
| Q64073928 | Identifying and exploiting gene-pathway interactions from RNA-seq data for binary phenotype |
| Q33407931 | Identifying disease associations via genome-wide association studies |
| Q100463518 | Immune Remodelling of the Extracellular Matrix Drives Loss of Cancer Stem Cells and Tumor Rejection |
| Q36090356 | Immune competence assessment in marine medaka (Orzyias melastigma)-a holistic approach for immunotoxicology. |
| Q60146701 | Immune genes are hotspots of shared positive selection across birds and mammals |
| Q61450220 | Immune genes are hotspots of shared positive selection across birds and mammals |
| Q27486568 | Immunity related genes in dipterans share common enrichment of AT-rich motifs in their 5' regulatory regions that are potentially involved in nucleosome formation |
| Q64074332 | Immunological Molecular Responses of Human Retinal Pigment Epithelial Cells to Infection With |
| Q30899557 | Immunological data from cancer patients treated with Ad5/3-E2F-Δ24-GMCSF suggests utility for tumor immunotherapy |
| Q59126521 | Impact of structural prior knowledge in SNV prediction: Towards causal variant finding in rare disease |
| Q40060038 | Impaired response of the bronchial epithelium to inflammation characterizes severe equine asthma |
| Q94516825 | In Vitro Evaluation of the Effects of Commercial Prebiotic GOS and FOS Products on Human Colonic Caco-2 Cells |
| Q34413907 | In depth comparison of an individual's DNA and its lymphoblastoid cell line using whole genome sequencing |
| Q36269696 | In silico analyses and global transcriptional profiling reveal novel putative targets for Pea3 transcription factor related to its function in neurons. |
| Q33482488 | In silico identification of a core regulatory network of OCT4 in human embryonic stem cells using an integrated approach |
| Q89115406 | Inactivation of CDK12 Delineates a Distinct Immunogenic Class of Advanced Prostate Cancer |
| Q38609468 | Incorporating Gene Annotation into Genomic Prediction of Complex Phenotypes |
| Q100391665 | Increased comparability between RNA-Seq and microarray data by utilization of gene sets |
| Q36327425 | Increased production of piRNAs from euchromatic clusters and genes in Anopheles gambiae compared with Drosophila melanogaster |
| Q30531604 | Induced pluripotent mesenchymal stromal cell clones retain donor-derived differences in DNA methylation profiles. |
| Q34805554 | Infection with a Virulent Strain of Wolbachia Disrupts Genome Wide-Patterns of Cytosine Methylation in the Mosquito Aedes aegypti |
| Q30791224 | Inference and validation of predictive gene networks from biomedical literature and gene expression data |
| Q31025966 | Inferring gene-phenotype associations via global protein complex network propagation |
| Q31162096 | Inferring mouse gene functions from genomic-scale data using a combined functional network/classification strategy |
| Q59332980 | Inflammatory pathways are upregulated in the nasal epithelium in patients with idiopathic pulmonary fibrosis |
| Q36136759 | Inhibition of Dihydroorotate Dehydrogenase Overcomes Differentiation Blockade in Acute Myeloid Leukemia. |
| Q52353838 | Insight into Genes Regulating Post-harvest Aflatoxin Contamination of Tetraploid Peanut from Transcriptional Profiling. |
| Q96591679 | Insights into high mobility group A (HMGA) proteins from Poaceae family: An in silico approach for studying homologs |
| Q64994676 | Integrated Functional Genomic Analysis Enables Annotation of Kidney Genome-Wide Association Study Loci. |
| Q59335736 | Integrated PTR-ToF-MS, GWAS and biological pathway analyses reveal the contribution of cow's genome to cheese volatilome |
| Q41135798 | Integrated miRNA and mRNA profiling of tumor-educated macrophages identifies prognostic subgroups in estrogen receptor-positive breast cancer |
| Q48148906 | Integrated ovarian mRNA and miRNA transcriptome profiling characterizes the genetic basis of prolificacy traits in sheep (Ovis aries). |
| Q33631737 | Integrating heterogeneous sequence information for transcriptome-wide microarray design; a Zebrafish example. |
| Q48251123 | Integration of GWAS, pathway and network analyses reveals novel mechanistic insights into the synthesis of milk proteins in dairy cows |
| Q47094727 | Integration of RNA-Seq data with heterogeneous microarray data for breast cancer profiling |
| Q91989623 | Integration of Transcriptomic Data Identifies Global and Cell-Specific Asthma-Related Gene Expression Signatures |
| Q31033425 | Integration of genomic data for pharmacology and toxicology using Internet resources. |
| Q31111803 | Integrative Analysis of Histone ChIP-seq and RNA-seq Data |
| Q96158624 | Integrative analysis of key candidate genes and signaling pathways in autoimmune thyroid dysfunction related to anti-CTLA-4 therapy by bioinformatics |
| Q92978032 | Integrative analysis reveals RNA G-quadruplexes in UTRs are selectively constrained and enriched for functional associations |
| Q51802432 | Integrative approach for prioritizing cancer genes in sporadic colon cancer. |
| Q91621858 | Integrative molecular and clinical modeling of clinical outcomes to PD1 blockade in patients with metastatic melanoma |
| Q37001980 | Integrative omics analysis reveals the importance and scope of translational repression in microRNA-mediated regulation |
| Q98207356 | Integrative transcriptomics reveals genotypic impact on sugar beet storability |
| Q93249771 | Interactome mapping defines BRG1, a component of the SWI/SNF chromatin remodeling complex, as a new partner of the transcriptional regulator CTCF |
| Q30560779 | Interfaces to PeptideAtlas: a case study of standard data access systems. |
| Q90287353 | Interleukin-11 is a therapeutic target in idiopathic pulmonary fibrosis |
| Q43151067 | Interplay among Drosophila transcription factors Ets21c, Fos and Ftz-F1 drives JNK-mediated tumor malignancy |
| Q109002749 | Investigating the Molecular Processes behind the Cell-Specific Toxicity Response to Titanium Dioxide Nanobelts |
| Q34216309 | Ischemia caused by time to freezing induces systematic microRNA and mRNA responses in cancer tissue |
| Q28679153 | JBioWH: an open-source Java framework for bioinformatics data integration |
| Q112043136 | KibioR & Kibio: a new architecture for next-generation data querying and sharing in big biology |
| Q90282483 | Kinome-wide identification of phosphorylation networks in eukaryotic proteomes |
| Q33688211 | Large-scale integration of MicroRNA and gene expression data for identification of enriched microRNA-mRNA associations in biological systems |
| Q33730629 | Linkage disequilibrium and signatures of positive selection around LINE-1 retrotransposons in the human genome. |
| Q31069236 | Linking publication, gene and protein data |
| Q35970467 | Lipid-mediated regulation of SKN-1/Nrf in response to germ cell absence |
| Q35126377 | Long non-coding RNA and alternative splicing modulations in Parkinson's leukocytes identified by RNA sequencing |
| Q29048160 | MAISTAS: a tool for automatic structural evaluation of alternative splicing products |
| Q38289483 | MOPAT: a graph-based method to predict recurrent cis-regulatory modules from known motifs |
| Q44194420 | MRMaid-DB: a repository of published SRM transitions. |
| Q39323642 | Major differences between human atopic dermatitis and murine models, as determined by using global transcriptomic profiling |
| Q47776097 | Mapping Selection within Drosophila melanogaster Embryo's Anatomy |
| Q35174434 | Mapping identifiers for the integration of genomic datasets with the R/Bioconductor package biomaRt |
| Q29048172 | Massive screening of copy number population-scale variation in Bos taurus genome |
| Q35040521 | Maternal high-fat diet and obesity compromise fetal hematopoiesis |
| Q35129397 | MeSH ORA framework: R/Bioconductor packages to support MeSH over-representation analysis |
| Q47138796 | Mechanisms of action of Coxiella burnetii effectors inferred from host-pathogen protein interactions |
| Q36416121 | Meta-Analysis of DNA Tumor-Viral Integration Site Selection Indicates a Role for Repeats, Gene Expression and Epigenetics |
| Q92538680 | Meta-Analysis of in vitro-Differentiated Macrophages Identifies Transcriptomic Signatures That Classify Disease Macrophages in vivo |
| Q64097743 | Meta-analysis of epigenome-wide association studies in neonates reveals widespread differential DNA methylation associated with birthweight |
| Q92078321 | Methodological challenges in translational drug response modeling in cancer: A systematic analysis with FORESEE |
| Q90626506 | MiRNA-target interactions in osteogenic signaling pathways involving zinc via the metal regulatory element |
| Q41366654 | Microarray analysis of differentially expressed genes in ovarian and fallopian tube epithelium from risk-reducing salpingo-oophorectomies. |
| Q28394835 | Mining gene expression data for pollutants (dioxin, toluene, formaldehyde) and low dose of gamma-irradiation |
| Q35147602 | Mining host-pathogen protein interactions to characterize Burkholderia mallei infectivity mechanisms. |
| Q30597548 | Mining large heterogeneous data sets in drug discovery |
| Q99555938 | Mitochondrial Transfer by Human Mesenchymal Stromal Cells Ameliorates Hepatocyte Lipid Load in a Mouse Model of NASH |
| Q31085571 | Model-driven user interfaces for bioinformatics data resources: regenerating the wheel as an alternative to reinventing it |
| Q89711459 | Modeling Down syndrome in animals from the early stage to the 4.0 models and next |
| Q64072479 | Modeling the pasture-associated severe equine asthma bronchoalveolar lavage fluid proteome identifies molecular events mediating neutrophilic airway inflammation |
| Q40253946 | Modular expression analysis reveals functional conservation between human Langerhans cells and mouse cross-priming dendritic cells. |
| Q91892876 | Modulation of stress and immune response by Amblyomin-X results in tumor cell death in a horse melanoma model |
| Q55118518 | Modulation of the peripheral blood transcriptome by the ingestion of probiotic yoghurt and acidified milk in healthy, young men. |
| Q64284486 | Molecular and pharmacological modulators of the tumor immune contexture revealed by deconvolution of RNA-seq data |
| Q40064156 | Molecular effectors and modulators of hypericin-mediated cell death in bladder cancer cells. |
| Q91813897 | Molecular footprint of Medawar's mutation accumulation process in mammalian aging |
| Q59329853 | Molecular patterns of cancer colonisation in lymph nodes of breast cancer patients |
| Q36211831 | Morphine produces immunosuppressive effects in nonhuman primates at the proteomic and cellular levels |
| Q97527193 | Multi-method genome- and epigenome-wide studies of inflammatory protein levels in healthy older adults |
| Q91947820 | Multi-omic Profiling Reveals Dynamics of the Phased Progression of Pluripotency |
| Q41410982 | Multi-omics Quantification of Species Variation of Escherichia coli Links Molecular Features with Strain Phenotypes |
| Q90305639 | Multi-omics analysis identifies mitochondrial pathways associated with anxiety-related behavior |
| Q90737598 | Multiple forms of selection shape reproductive isolation in a primate hybrid zone |
| Q91910625 | Mutant CEBPA directly drives the expression of the targetable tumor-promoting factor CD73 in AML |
| Q55078547 | MutationalPatterns: comprehensive genome-wide analysis of mutational processes. |
| Q91996689 | Myocarditis in Cynomolgus Monkeys Following Treatment with Immune Checkpoint Inhibitors |
| Q33407515 | NF-E2 p45 is important for establishing normal function of platelets |
| Q30663634 | NPEBseq: nonparametric empirical bayesian-based procedure for differential expression analysis of RNA-seq data |
| Q30656589 | NanoMiner - integrative human transcriptomics data resource for nanoparticle research |
| Q42357261 | Nanog-dependent feedback loops regulate murine embryonic stem cell heterogeneity |
| Q57175754 | Netpredictor: R and Shiny package to perform drug-target network analysis and prediction of missing links |
| Q50317765 | Network analysis of coronary artery disease risk genes elucidates disease mechanisms and druggable targets. |
| Q90910276 | Network-Based Functional Prediction Augments Genetic Association To Predict Candidate Genes for Histamine Hypersensitivity in Mice |
| Q51730916 | Neurogenomic Profiling Reveals Distinct Gene Expression Profiles Between Brain Parts That Are Consistent in Ophthalmotilapia Cichlids. |
| Q62800192 | Neuronal brain-region-specific DNA methylation and chromatin accessibility are associated with neuropsychiatric trait heritability |
| Q52560637 | New perspectives: systems medicine in cardiovascular disease. |
| Q99565801 | Next-generation sequencing of newborn screening genes: the accuracy of short-read mapping |
| Q36576661 | Next-generation sequencing of small RNAs from HIV-infected cells identifies phased microrna expression patterns and candidate novel microRNAs differentially expressed upon infection |
| Q93186684 | Nonrandom RNAseq gene expression associated with RNAlater and flash freezing storage methods |
| Q27320793 | Normal formation of a vertebrate body plan and loss of tissue maintenance in the absence of ezh2. |
| Q96301668 | Notch-mediated generation of monocyte-derived Langerhans cells: Phenotype and function |
| Q89781606 | Novel Breast Cancer Brain Metastasis Patient-Derived Orthotopic Xenograft Model for Preclinical Studies |
| Q34783879 | Novel Burkholderia mallei virulence factors linked to specific host-pathogen protein interactions. |
| Q96227062 | Novel Comprehensive Bioinformatics Approaches to Determine the Molecular Genetic Susceptibility Profile of Moderate and Severe Asthma |
| Q38909020 | Novel long non-coding RNAs are specific diagnostic and prognostic markers for prostate cancer |
| Q47766819 | Number of inadvertent RNA targets for morpholino knockdown in Danio rerio is largely underestimated: evidence from the study of Ser/Arg-rich splicing factors. |
| Q90711716 | OHNOLOGS v2: a comprehensive resource for the genes retained from whole genome duplication in vertebrates |
| Q98471489 | On the cross-population generalizability of gene expression prediction models |
| Q36056531 | OncoScape: Exploring the cancer aberration landscape by genomic data fusion |
| Q27010369 | Online resources of cancer data: barriers, benefits and lessons |
| Q38515972 | Onto-Tools: new additions and improvements in 2006. |
| Q36312053 | OrbId: Origin-based identification of microRNA targets |
| Q84353677 | Overestimation of nonsynonymous/synonymous rate ratio by reverse-translation of aligned amino acid sequences |
| Q99560564 | Overexpression of Long Noncoding RNA HOTAIR Is a Unique Epigenetic Characteristic of Myxopapillary Ependymoma |
| Q101132997 | PAR-TERRA is the main contributor to telomeric repeat-containing RNA transcripts in normal and cancer mouse cells |
| Q28755658 | PRIDE: new developments and new datasets |
| Q96169295 | PS4DR: a multimodal workflow for identification and prioritization of drugs based on pathway signatures |
| Q37254063 | PTEN deficiency in a luminal ErbB-2 mouse model results in dramatic acceleration of mammary tumorigenesis and metastasis |
| Q30483618 | Pancreatic Expression database: a generic model for the organization, integration and mining of complex cancer datasets |
| Q46533544 | Parallel evolution of male germline epigenetic poising and somatic development in animals. |
| Q42183671 | ParkDB: a Parkinson's disease gene expression database |
| Q92734018 | Pathogenic Epigenetic Consequences of Genetic Alterations in IDH-Wild-Type Diffuse Astrocytic Gliomas |
| Q38635886 | Pathway-Based Kernel Boosting for the Analysis of Genome-Wide Association Studies |
| Q38439030 | Pathway-based genome-wide association analysis of milk coagulation properties, curd firmness, cheese yield, and curd nutrient recovery in dairy cattle. |
| Q91086363 | Pathway-based meta-analysis for partially paired transcriptomics analysis |
| Q35421310 | Pdsg1 and Pdsg2, novel proteins involved in developmental genome remodelling in Paramecium |
| Q31161025 | PepSeeker: mining information from proteomic data |
| Q21284206 | Performing statistical analyses on quantitative data in Taverna workflows: an example using R and maxdBrowse to identify differentially-expressed genes from microarray data |
| Q104110078 | Peripheral blood transcriptomic sub-phenotypes of pediatric acute respiratory distress syndrome |
| Q38874298 | Personalized diagnosis of medulloblastoma subtypes across patients and model systems |
| Q92072874 | Pervasive Inter-Individual Variation in Allele-Specific Expression in Monozygotic Twins |
| Q90898954 | PhenoModifier: a genetic modifier database for elucidating the genetic basis of human phenotypic variation |
| Q35748303 | PhosphOrtholog: a web-based tool for cross-species mapping of orthologous protein post-translational modifications |
| Q50045566 | Phospholipase D isoforms differentially regulate leukocyte responses to acute lung injury. |
| Q91145929 | Phosphoproteomics of Acute Cell Stressors Targeting Exercise Signaling Networks Reveal Drug Interactions Regulating Protein Secretion |
| Q90353797 | Phylogenetic modeling of regulatory element turnover based on epigenomic data |
| Q94461817 | Polymorphisms in miRNA binding sites involved in metabolic diseases in mice and humans |
| Q45908406 | Post-weaning epiphysiolysis causes distal femur dysplasia and foreshortened hindlimbs in fetuin-A-deficient mice. |
| Q31159715 | Pre-processing of microarray data and analysis of differential expression |
| Q90345575 | Predicting Stage-Specific Recurrent Aberrations From Somatic Copy Number Dataset |
| Q47845601 | Predicting bull fertility using genomic data and biological information |
| Q91819248 | Predicting effective drug combinations using gradient tree boosting based on features extracted from drug-protein heterogeneous network |
| Q33916198 | Predicting susceptibility to tuberculosis based on gene expression profiling in dendritic cells |
| Q62801481 | Predicting susceptibility to tuberculosis based on gene expression profiling in dendritic cells |
| Q91899199 | Priming exposures to lipopolysaccharides do not affect the induction of Polycomb target genes upon re-exposure |
| Q93012784 | Prioritization of cancer therapeutic targets using CRISPR-Cas9 screens |
| Q97641633 | Profiling of cis- and trans-acting factors supporting noncanonical splice site activation |
| Q96645346 | Programmatic access to bacterial regulatory networks with regutools |
| Q91765660 | Proliferating Transitory T Cells with an Effector-like Transcriptional Signature Emerge from PD-1+ Stem-like CD8+ T Cells during Chronic Infection |
| Q40009985 | Prolyl endopeptidase is revealed following SILAC analysis to be a novel mediator of human microglial and THP-1 cell neurotoxicity |
| Q33495709 | Properties of untranslated regions of the S. cerevisiae genome |
| Q44140964 | Prostaglandin E2 modulates the expression of antimicrobial peptides in the fat body and midgut of Anopheles albimanus. |
| Q98162889 | Protamine-2 Deficiency Initiates a Reactive Oxygen Species (ROS)-Mediated Destruction Cascade during Epididymal Sperm Maturation in Mice |
| Q43058879 | Protein interactions with the platelet integrin alpha(IIb) regulatory motif |
| Q99201328 | Proteogenomic analysis of melanoma brain metastases from distinct anatomical sites identifies pathways of metastatic progression |
| Q42014305 | Proteome Dynamics Reveals Pro-Inflammatory Remodeling of Plasma Proteome in a Mouse Model of NAFLD |
| Q28754290 | Pseudofam: the pseudogene families database |
| Q57728783 | Pseudogenes in the mouse lineage: transcriptional activity and strain-specific history |
| Q47965731 | QTLs Associated with Crown Root Angle, Stomatal Conductance, and Maturity in Sorghum |
| Q55354251 | Quantitative proteomic characterization and comparison of T helper 17 and induced regulatory T cells. |
| Q30977725 | QuickNGS elevates Next-Generation Sequencing data analysis to a new level of automation |
| Q50016479 | RBiomirGS: an all-in-one miRNA gene set analysis solution featuring target mRNA mapping and expression profile integration. |
| Q36783636 | RIPSeeker: a statistical package for identifying protein-associated transcripts from RIP-seq experiments |
| Q37368517 | RMaNI: Regulatory Module Network Inference framework |
| Q100940011 | RNA sequencing of whole blood in dogs with primary immune-mediated hemolytic anemia (IMHA) reveals novel insights into disease pathogenesis |
| Q93190399 | RNA-Seq Data-Mining Allows the Discovery of Two Long Non-Coding RNA Biomarkers of Viral Infection in Humans |
| Q34085200 | RNA-seq Transcriptional Profiling of Peripheral Blood Leukocytes from Cattle Infected with Mycobacterium bovis |
| Q37077625 | RNA-seq analysis is easy as 1-2-3 with limma, Glimma and edgeR. |
| Q43409460 | RNAplex: a fast tool for RNA-RNA interaction search |
| Q92220252 | RSAT variation-tools: An accessible and flexible framework to predict the impact of regulatory variants on transcription factor binding |
| Q96431252 | Rab11b-mediated integrin recycling promotes brain metastatic adaptation and outgrowth |
| Q55008423 | Racial differences in endometrial cancer molecular portraits in The Cancer Genome Atlas. |
| Q57791529 | Ranking noncanonical 5' splice site usage by genome-wide RNA-seq analysis and splicing reporter assays |
| Q53641003 | Rapid and convergent evolution in the glioblastoma multiforme genome. |
| Q30831794 | Rare and common epilepsies converge on a shared gene regulatory network providing opportunities for novel antiepileptic drug discovery. |
| Q33657722 | Rate of elongation by RNA polymerase II is associated with specific gene features and epigenetic modifications |
| Q51636523 | Reactome knowledgebase of human biological pathways and processes. |
| Q28608563 | Reactome pathway analysis to enrich biological discovery in proteomics data sets |
| Q97533252 | Reanalysis and integration of public microarray datasets reveals novel host genes modulated in leprosy |
| Q39688534 | Recent demography drives changes in linked selection across the maize genome. |
| Q33500841 | Reciprocal regulation of microRNA and mRNA profiles in neuronal development and synapse formation |
| Q33417923 | Reconstruction of metabolic pathways for the cattle genome |
| Q28652610 | Reconstruction of the ancestral marsupial karyotype from comparative gene maps |
| Q33932915 | Regional regulation of transcription in the bovine genome. |
| Q33523878 | Regional regulation of transcription in the chicken genome |
| Q36190535 | Regulatory Architecture of Gene Expression Variation in the Threespine Stickleback Gasterosteus aculeatus. |
| Q39187683 | Replication stress links structural and numerical cancer chromosomal instability |
| Q42021260 | Reproducible probe-level analysis of the Affymetrix Exon 1.0 ST array with R/Bioconductor |
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