Altered target site specificity variants of the I-PpoI His-Cys box homing endonuclease

scientific article

Altered target site specificity variants of the I-PpoI His-Cys box homing endonuclease is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1093/NAR/GKM624
P932PMC publication ID2034468
P698PubMed publication ID17720708
P5875ResearchGate publication ID6119037

P50authorUmut Y UlgeQ56057050
P2093author name stringRaymond J Monnat
Jennifer Eastberg
Jennifer L Eklund
P2860cites workHoming endonucleases: keeping the house in orderQ24545192
Computational redesign of endonuclease DNA binding and cleavage specificityQ24569661
An overview of the structures of protein-DNA complexesQ24804125
Protein-DNA binding specificity predictions with structural modelsQ24811023
A novel endonuclease mechanism directly visualized for I-PpoIQ27620540
Conformational changes and cleavage by the homing endonuclease I-PpoI: a critical role for a leucine residue in the active siteQ27625320
DNA binding and cleavage by the nuclear intron-encoded homing endonuclease I-PpoIQ27764571
A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiaeQ27860636
Directed evolution and substrate specificity profile of homing endonuclease I-SceI.Q27936586
Gene targeting using zinc finger nucleasesQ28265983
I-PpoI and I-CreI homing site sequence degeneracy determined by random mutagenesis and sequential in vitro enrichmentQ28276603
Homing endonuclease genes: the rise and fall and rise again of a selfish elementQ28292077
Transcription factors: structural families and principles of DNA recognitionQ29615317
Getting started with yeastQ29618025
Sterile host yeasts (SHY): A eukaryotic system of biological containment for recombinant DNA experimentsQ29620758
Amino acid-base interactions: a three-dimensional analysis of protein-DNA interactions at an atomic levelQ30014824
Assessing the plasticity of DNA target site recognition of the PI-SceI homing endonuclease using a bacterial two-hybrid selection systemQ31029529
Yeast transformation by the LiAc/SS Carrier DNA/PEG methodQ33222169
Invasion of a multitude of genetic niches by mobile endonuclease genesQ33885297
Homing endonuclease structure and functionQ34473961
Type II restriction endonucleases: structure and mechanismQ34555997
Protein-DNA recognition patterns and predictions.Q36115484
Crystallization and preliminary X-ray studies of I-PpoI: a nuclear, intron-encoded homing endonuclease from Physarum polycephalumQ36280256
Indirect readout of DNA sequence by proteins: the roles of DNA sequence-dependent intrinsic and extrinsic forcesQ36557529
A mobile group I intron from Physarum polycephalum can insert itself and induce point mutations in the nuclear ribosomal DNA of saccharomyces cerevisiaeQ36661174
Characterization of I-Ppo, an intron-encoded endonuclease that mediates homing of a group I intron in the ribosomal DNA of Physarum polycephalumQ36714793
Meganucleases and DNA double-strand break-induced recombination: perspectives for gene therapyQ36737863
Interaction of the intron-encoded mobility endonuclease I-PpoI with its target siteQ36827630
Cloning of random oligonucleotides to create single-insert plasmid librariesQ38299172
Degenerate DNA recognition by I-PpoI endonuclease.Q38340018
Roles of ATM and NBS1 in chromatin structure modulation and DNA double-strand break repairQ40135858
Repair of a specific double-strand break generated within a mammalian chromosome by yeast endonuclease I-SceI.Q40410325
Homologous recombination in plant cells is enhanced by in vivo induction of double strand breaks into DNA by a site-specific endonucleaseQ40412858
Generation of highly site-specific DNA double-strand breaks in human cells by the homing endonucleases I-PpoI and I-CreI.Q40966076
Introduction of double-strand breaks into the genome of mouse cells by expression of a rare-cutting endonucleaseQ42832099
A simple physical model for the prediction and design of protein-DNA interactionsQ48166706
A mobile group I intron in the nuclear rDNA of Physarum polycephalumQ64390183
Structural parsimony in endonuclease active sites: should the number of homing endonuclease families be redefined?Q73280737
Recognizing DNAQ82723826
P433issue17
P407language of work or nameEnglishQ1860
P304page(s)5839-5850
P577publication date2007-08-24
P1433published inNucleic Acids ResearchQ135122
P1476titleAltered target site specificity variants of the I-PpoI His-Cys box homing endonuclease
P478volume35

Reverse relations

cites work (P2860)
Q35750783A localized nucleolar DNA damage response facilitates recruitment of the homology-directed repair machinery independent of cell cycle stage.
Q28749088Cofactor requirement of HpyAV restriction endonuclease
Q35017891Comprehensive computational design of mCreI homing endonuclease cleavage specificity for genome engineering
Q27665420Evolution of I-SceI Homing Endonucleases with Increased DNA Recognition Site Specificity
Q36709717Homing endonucleases catalyze double-stranded DNA breaks and somatic transgene excision in Aedes aegypti.
Q37633432Homing endonucleases: from basics to therapeutic applications.
Q33827114Linear nicking endonuclease-mediated strand-displacement DNA amplification
Q92403169Pest management by genetic addiction
Q41956295Pushing the limits of what is achievable in protein-DNA docking: benchmarking HADDOCK's performance.
Q34003956Sequence conversion by single strand oligonucleotide donors via non-homologous end joining in mammalian cells
Q33844698Successful targeting and disruption of an integrated reporter lentivirus using the engineered homing endonuclease Y2 I-AniI.
Q37581606Targeted approaches for gene therapy and the emergence of engineered meganucleases

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