| P50 | author | Hélène Gaillard | Q57041661 |
| | Joaquin Arino | Q60503389 |
| | Alfonso Rodríguez-Gil | Q79458013 |
| | Cristina González-Aguilera | Q81720268 |
| | María L García-Rubio | Q43158419 |
| | José L. Revuelta | Q36597850 |
| | Sebastián Chávez | Q37374358 |
| | Andrés Aguilera | Q37382275 |
| P2093 | author name string | Laia Viladevall | |
| | Antonio Marín | |
| | Javier Botet | |
| | Cristina Tous | |
| | Maria José Quintero | |
| P2860 | cites work | CCR4, a 3'-5' poly(A) RNA and ssDNA exonuclease, is the catalytic component of the cytoplasmic deadenylase | Q24292432 |
| | Recognition of RNA polymerase II and transcription bubbles by XPG, CSB, and TFIIH: insights for transcription-coupled repair and Cockayne Syndrome | Q24292732 |
| | Cockayne syndrome group B protein enhances elongation by RNA polymerase II | Q24317053 |
| | DNA damage and replication stress induced transcription of RNR genes is dependent on the Ccr4-Not complex. | Q24815044 |
| | Genome-wide requirements for resistance to functionally distinct DNA-damaging agents | Q24815105 |
| | Roles for Gcn5p and Ada2p in transcription and nucleotide excision repair at the Saccharomyces cerevisiae MET16 gene | Q25256763 |
| | The yeast THO complex and mRNA export factors link RNA metabolism with transcription and genome instability | Q27929526 |
| | Ccr4 contributes to tolerance of replication stress through control of CRT1 mRNA poly(A) tail length | Q27929903 |
| | Evidence that the transcription elongation function of Rpb9 is involved in transcription-coupled DNA repair in Saccharomyces cerevisiae | Q27930103 |
| | Bur1 kinase is required for efficient transcription elongation by RNA polymerase II. | Q27930313 |
| | Molecular evidence for a positive role of Spt4 in transcription elongation | Q27930449 |
| | The yeast Ccr4-Not complex controls ubiquitination of the nascent-associated polypeptide (NAC-EGD) complex | Q27930672 |
| | Characterization of the calcium-mediated response to alkaline stress in Saccharomyces cerevisiae. | Q27930851 |
| | The Paf1 complex is required for histone H3 methylation by COMPASS and Dot1p: linking transcriptional elongation to histone methylation | Q27930884 |
| | Genetic evidence supports a role for the yeast CCR4-NOT complex in transcriptional elongation. | Q27930971 |
| | Cell cycle progression in G1 and S phases is CCR4 dependent following ionizing radiation or replication stress in Saccharomyces cerevisiae | Q27931688 |
| | A new connection of mRNP biogenesis and export with transcription-coupled repair | Q27931906 |
| | Direct interactions between the Paf1 complex and a cleavage and polyadenylation factor are revealed by dissociation of Paf1 from RNA polymerase II. | Q27933085 |
| | The Paf1 complex physically and functionally associates with transcription elongation factors in vivo | Q27933848 |
| | The DNA damage checkpoint response requires histone H2B ubiquitination by Rad6-Bre1 and H3 methylation by Dot1. | Q27934025 |
| | A Requirement for the Saccharomyces cerevisiae Paf1 complex in snoRNA 3' end formation | Q27934649 |
| | The Saccharomyces cerevisiae RAD9, RAD17, RAD24 and MEC3 genes are required for tolerating irreparable, ultraviolet-induced DNA damage | Q27935475 |
| | Histone H2B ubiquitylation is associated with elongating RNA polymerase II | Q27936299 |
| | Molecular evidence indicating that the yeast PAF complex is required for transcription elongation | Q27936952 |
| | RAD26, the functional S. cerevisiae homolog of the Cockayne syndrome B gene ERCC6. | Q27937381 |
| | Methylation of histone H3 lysine-79 by Dot1p plays multiple roles in the response to UV damage in Saccharomyces cerevisiae. | Q27937420 |
| | The transcription factor associated Ccr4 and Caf1 proteins are components of the major cytoplasmic mRNA deadenylase in Saccharomyces cerevisiae | Q27937565 |
| | A Rad26-Def1 complex coordinates repair and RNA pol II proteolysis in response to DNA damage | Q27937572 |
| | Regulation of histone modification and cryptic transcription by the Bur1 and Paf1 complexes | Q27938071 |
| | H2B ubiquitin protease Ubp8 and Sgf11 constitute a discrete functional module within the Saccharomyces cerevisiae SAGA complex. | Q27939759 |
| | The THP1-SAC3-SUS1-CDC31 complex works in transcription elongation-mRNA export preventing RNA-mediated genome instability. | Q27939828 |
| | The Paf1 complex is essential for histone monoubiquitination by the Rad6-Bre1 complex, which signals for histone methylation by COMPASS and Dot1p | Q27940017 |
| | A complex containing RNA polymerase II, Paf1p, Cdc73p, Hpr1p, and Ccr4p plays a role in protein kinase C signaling | Q27940291 |
| | Elongation by RNA polymerase II: the short and long of it | Q29614529 |
| | Histone ubiquitination: triggering gene activity | Q29617523 |
| | Distinction and relationship between elongation rate and processivity of RNA polymerase II in vivo | Q29619233 |
| | The SAGA continues: expanding the cellular role of a transcriptional co-activator complex | Q30438554 |
| | Spt4 modulates Rad26 requirement in transcription-coupled nucleotide excision repair | Q30973998 |
| | Initiation of DNA repair mediated by a stalled RNA polymerase IIO. | Q33231453 |
| | Requirement for yeast RAD26, a homolog of the human CSB gene, in elongation by RNA polymerase II | Q33551567 |
| | Transcription-coupled DNA repair in yeast transcription factor IIE (TFIIE) mutants | Q33614239 |
| | A posttranscriptional role for the yeast Paf1-RNA polymerase II complex is revealed by identification of primary targets. | Q53652090 |
| | A simple in vivo assay for measuring the efficiency of gene length-dependent processes in yeast mRNA biogenesis | Q82401286 |
| | The Saccharomyces cerevisiae RAD9 cell cycle checkpoint gene is required for optimal repair of UV-induced pyrimidine dimers in both G(1) and G(2)/M phases of the cell cycle | Q39085968 |
| | Hpr1 is preferentially required for transcription of either long or G+C-rich DNA sequences in Saccharomyces cerevisiae. | Q39528577 |
| | Ultraviolet radiation-induced ubiquitination and proteasomal degradation of the large subunit of RNA polymerase II. Implications for transcription-coupled DNA repair | Q41056225 |
| | A chemical genomic screen in Saccharomyces cerevisiae reveals a role for diphthamidation of translation elongation factor 2 in inhibition of protein synthesis by sordarin | Q41876397 |
| | CAF1 plays an important role in mRNA deadenylation separate from its contact to CCR4. | Q42025763 |
| | Regulation of histone H3K4 tri-methylation and PAF complex recruitment by the Ccr4-Not complex | Q42747908 |
| | Screening the yeast "disruptome" for mutants affecting resistance to the immunosuppressive drug, mycophenolic acid | Q43997248 |
| | Phenotypic analysis of Paf1/RNA polymerase II complex mutations reveals connections to cell cycle regulation, protein synthesis, and lipid and nucleic acid metabolism | Q44190695 |
| | H2B ubiquitylation plays a role in nucleosome dynamics during transcription elongation | Q46493188 |
| | Multiple mechanisms confining RNA polymerase II ubiquitylation to polymerases undergoing transcriptional arrest | Q46550839 |
| | DNA damage-induced Def1-RNA polymerase II interaction and Def1 requirement for polymerase ubiquitylation in vitro | Q47422023 |
| | Histone acetylation, chromatin remodelling, transcription and nucleotide excision repair in S. cerevisiae: studies with two model genes | Q50129981 |
| | Gcn5 promotes acetylation, eviction, and methylation of nucleosomes in transcribed coding regions. | Q53577981 |
| | The genetic defect in Cockayne syndrome is associated with a defect in repair of UV-induced DNA damage in transcriptionally active DNA. | Q33640104 |
| | Cells have distinct mechanisms to maintain protection against different reactive oxygen species: oxidative-stress-response genes | Q33695799 |
| | E. coli Transcription repair coupling factor (Mfd protein) rescues arrested complexes by promoting forward translocation | Q34135671 |
| | Rpb4 and Rpb9 mediate subpathways of transcription-coupled DNA repair in Saccharomyces cerevisiae | Q34207143 |
| | Rules of engagement: co-transcriptional recruitment of pre-mRNA processing factors | Q34419716 |
| | Transcription-coupled repair: a complex affair | Q34421058 |
| | A genome-wide screen for methyl methanesulfonate-sensitive mutants reveals genes required for S phase progression in the presence of DNA damage | Q34430366 |
| | The Bur1/Bur2 complex is required for histone H2B monoubiquitination by Rad6/Bre1 and histone methylation by COMPASS. | Q34470200 |
| | Mechanisms of transcription-coupled DNA repair | Q34514438 |
| | Terminating the transcript: breaking up is hard to do. | Q34520033 |
| | Breaking barriers to transcription elongation | Q34561019 |
| | Ccr4-not complex mRNA deadenylase activity contributes to DNA damage responses in Saccharomyces cerevisiae | Q34570125 |
| | The CCR4-NOT complex plays diverse roles in mRNA metabolism | Q35185687 |
| | The eukaryotic Ccr4-not complex: a regulatory platform integrating mRNA metabolism with cellular signaling pathways? | Q35805081 |
| | Diverse roles for histone H2A modifications in DNA damage response pathways in yeast | Q35844894 |
| | Yeast Rpb9 plays an important role in ubiquitylation and degradation of Rpb1 in response to UV-induced DNA damage | Q35948156 |
| | SAGA unveiled. | Q36011032 |
| | Bur1/Bur2 and the Ctk complex in yeast: the split personality of mammalian P-TEFb | Q36487341 |
| | Ccr4 alters cell size in yeast by modulating the timing of CLN1 and CLN2 expression | Q36665844 |
| | Contending with transcriptional arrest during RNAPII transcript elongation | Q36756252 |
| | Mediator complexes and eukaryotic transcription regulation: an overview | Q36942779 |
| | Biogenesis of mRNPs: integrating different processes in the eukaryotic nucleus | Q37144184 |
| | Members of the SAGA and Mediator complexes are partners of the transcription elongation factor TFIIS. | Q37592638 |
| | Genome-wide occupancy profile of mediator and the Srb8-11 module reveals interactions with coding regions | Q38314041 |
| | Defective Kin28, a subunit of yeast TFIIH, impairs transcription-coupled but not global genome nucleotide excision repair. | Q38329870 |
| | The structure and function of RAD6 and RAD18 DNA repair genes of Saccharomyces cerevisiae | Q38778956 |
| P275 | copyright license | Creative Commons Attribution 4.0 International | Q20007257 |
| P6216 | copyright status | copyrighted | Q50423863 |
| P433 | issue | 2 | |
| P304 | page(s) | e1000364 | |
| P577 | publication date | 2009-02-06 | |
| P1433 | published in | PLOS Genetics | Q1893441 |
| P1476 | title | Genome-wide analysis of factors affecting transcription elongation and DNA repair: a new role for PAF and Ccr4-not in transcription-coupled repair | |
| P478 | volume | 5 | |