Specialized or flexible feed-forward loop motifs: a question of topology

scientific article published on 31 August 2009

Specialized or flexible feed-forward loop motifs: a question of topology is …
instance of (P31):
scholarly articleQ13442814

External links are
P8978DBLP publication IDjournals/bmcsb/MaciaWS09
P356DOI10.1186/1752-0509-3-84
P932PMC publication ID2749051
P698PubMed publication ID19719842
P5875ResearchGate publication ID26779562

P50authorRichard V. SoléQ21530946
Stefanie WidderQ56422335
P2093author name stringJavier Macía
P2860cites workThe Bacillus subtilis sin operon: an evolvable network motifQ24544957
Network motifs: structure does not determine functionQ24548927
Design and implementation of three incoherent feed-forward motif based biological concentration sensorsQ24648654
Structure and function of the feed-forward loop network motifQ24683513
Dynamic properties of network motifs contribute to biological network organizationQ24810462
Transcriptional regulatory networks in Saccharomyces cerevisiaeQ27860846
Network biology: understanding the cell's functional organizationQ27861027
Distributed robustness in cellular networks: insights from synthetic evolved circuitsQ28755021
Network motifs: simple building blocks of complex networksQ29547340
Network motifs in the transcriptional regulation network of Escherichia coliQ29547342
From molecular to modular cell biologyQ29547493
The Biochemical Basis of an All-or-None Cell Fate Switch in Xenopus OocytesQ29619826
Transcriptional dynamics of the embryonic stem cell switchQ33257709
Modelling cellular behaviourQ33934640
A reduced model clarifies the role of feedback loops and time delays in the Drosophila circadian oscillatorQ34179029
Coupled positive and negative feedback circuits form an essential building block of cellular signaling pathwaysQ51926204
Noise characteristics of feed forward loopsQ51962902
Topological generalizations of network motifsQ51985085
Cross talking of network motifs in gene regulation that generates temporal pulses and spatial stripesQ52036513
A feedforward loop motif in transcriptional regulation: induction and repression.Q54491149
Are network motifs the spandrels of cellular complexity?Q83961070
Building a cell cycle oscillator: hysteresis and bistability in the activation of Cdc2.Q34182935
Convergent evolution of gene circuitsQ34207780
Topology of biological networks and reliability of information processingQ34234755
The Coherent Feedforward Loop Serves as a Sign-sensitive Delay Element in Transcription NetworksQ34275513
The incoherent feed-forward loop accelerates the response-time of the gal system of Escherichia coliQ34483407
Feed-forward loop circuits as a side effect of genome evolutionQ34547351
Mining logic gates in prokaryotic transcriptional regulation networksQ34750229
Do motifs reflect evolved function?--No convergent evolution of genetic regulatory network subgraph topologies.Q34793697
Motifs, modules and games in bacteriaQ35121904
Back to the biology in systems biology: what can we learn from biomolecular networks?Q35784207
Negative feedback that improves information transmission in yeast signallingQ37277701
Minimal model for signal-induced Ca2+ oscillations and for their frequency encoding through protein phosphorylationQ37698658
Dynamic signaling in the Hog1 MAPK pathway relies on high basal signal transduction.Q42451365
Rate constants rather than biochemical mechanism determine behaviour of genetic clocksQ43078784
How to make a biological switchQ43490291
A feed-forward loop guarantees robust behavior in Escherichia coli carbohydrate uptakeQ46813885
The biphasic behavior of incoherent feed-forward loops in biomolecular regulatory networksQ47285375
FANMOD: a tool for fast network motif detectionQ48602055
P275copyright licenseCreative Commons Attribution 2.0 GenericQ19125117
P6216copyright statuscopyrightedQ50423863
P304page(s)84
P577publication date2009-08-31
P1433published inBMC Systems BiologyQ4835949
P1476titleSpecialized or flexible feed-forward loop motifs: a question of topology
P478volume3

Reverse relations

cites work (P2860)
Q44211748A coherent feedforward loop design principle to sustain robustness of biological networks
Q42290236A spectrum of modularity in multi-functional gene circuits
Q39668287Design principles of stripe-forming motifs: the role of positive feedback
Q34504403Dynamic and structural constraints in signal propagation by regulatory networks.
Q34133112Evolvability of feed-forward loop architecture biases its abundance in transcription networks
Q42384762Form and function in gene regulatory networks: the structure of network motifs determines fundamental properties of their dynamical state space
Q35973469Function does not follow form in gene regulatory circuits
Q37854175Impulse Control: Temporal Dynamics in Gene Transcription
Q35044290Lessons from the modular organization of the transcriptional regulatory network of Bacillus subtilis.
Q37452616Noise Decomposition Principle in a Coherent Feed-Forward Transcriptional Regulatory Loop.
Q34318172Protein scaffolds can enhance the bistability of multisite phosphorylation systems
Q37270376Reducing the complexity of complex gene coexpression networks by coupling multiweighted labeling with topological analysis
Q33826254Structural discrimination of robustness in transcriptional feedforward loops for pattern formation.
Q42217583The combination of the functionalities of feedback circuits is determinant for the attractors' number and size in pathway-like Boolean networks

Search more.