XTandem Parser: an open-source library to parse and analyse X!Tandem MS/MS search results

scientific article

XTandem Parser: an open-source library to parse and analyse X!Tandem MS/MS search results is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1002/PMIC.200900759
P698PubMed publication ID20140905

P50authorLennart MartensQ42647916
Harald BarsnesQ110514737
P2093author name stringAlbert Sickmann
Thilo Muth
Marc Vaudel
P433issue7
P921main subjectopen-source softwareQ1130645
P304page(s)1522-1524
P577publication date2010-04-01
P1433published inProteomicsQ15614164
P1476titleXTandem Parser: an open-source library to parse and analyse X!Tandem MS/MS search results
P478volume10

Reverse relations

cites work (P2860)
Q35606771A draft map of rhesus monkey tissue proteome for biomedical research
Q88506291A-to-I RNA Editing Contributes to Proteomic Diversity in Cancer
Q28546408Biochemical, transcriptomic and proteomic analyses of digestion in the scorpion Tityus serrulatus: insights into function and evolution of digestion in an ancient arthropod
Q34275201Chimeras taking shape: potential functions of proteins encoded by chimeric RNA transcripts
Q38063572Current methods for global proteome identification
Q44186697D-score: a search engine independent MD-score.
Q36125534High throughput techniques to reveal the molecular physiology and evolution of digestion in spiders
Q35624427IPeak: An open source tool to combine results from multiple MS/MS search engines
Q38427624Identification of cardiac myofilament protein isoforms using multiple mass spectrometry based approaches
Q30738680MASSyPup--an 'out of the box' solution for the analysis of mass spectrometry data
Q28660368Open source libraries and frameworks for mass spectrometry based proteomics: a developer's perspective
Q36055712PGA: an R/Bioconductor package for identification of novel peptides using a customized database derived from RNA-Seq.
Q28656032Pride-asap: automatic fragment ion annotation of identified PRIDE spectra
Q51600991SearchGUI: An open-source graphical user interface for simultaneous OMSSA and X!Tandem searches.
Q28710369The PRoteomics IDEntification (PRIDE) Converter 2 framework: an improved suite of tools to facilitate data submission to the PRIDE database and the ProteomeXchange consortium
Q45299510The good, the bad, the ugly: validating the mass spectrometric analysis of modified peptides
Q28661716Tools (Viewer, Library and Validator) that facilitate use of the peptide and protein identification standard format, termed mzIdentML
Q30878062Viewing the proteome: how to visualize proteomics data?
Q33834487Visualize: a free and open source multifunction tool for proteomics data analysis
Q33840310compomics-utilities: an open-source Java library for computational proteomics
Q28658662jmzIdentML API: A Java interface to the mzIdentML standard for peptide and protein identification data
Q34249159jmzReader: A Java parser library to process and visualize multiple text and XML-based mass spectrometry data formats
Q42593135sapFinder: an R/Bioconductor package for detection of variant peptides in shotgun proteomics experiments

Search more.