Visualize: a free and open source multifunction tool for proteomics data analysis

scientific article published on February 7, 2011

Visualize: a free and open source multifunction tool for proteomics data analysis is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1002/PMIC.201000556
P932PMC publication ID3816356
P698PubMed publication ID21365761

P2093author name stringAndrew S Greene
Brian D Halligan
P2860cites workGene ontology: tool for the unification of biologyQ23781406
KEGG: Kyoto Encyclopedia of Genes and GenomesQ24548371
The Universal Protein Resource (UniProt)Q24558582
Basic local alignment search toolQ25938991
A simple method for displaying the hydropathic character of a proteinQ26778481
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resourcesQ27860739
Quantitative analysis of complex protein mixtures using isotope-coded affinity tagsQ28145324
The human plasma proteome: history, character, and diagnostic prospectsQ28218148
Reactome: a knowledge base of biologic pathways and processesQ28757721
A guided tour of the Trans-Proteomic PipelineQ30497827
An assessment of software solutions for the analysis of mass spectrometry based quantitative proteomics dataQ31141751
MascotDatfile: an open-source library to fully parse and analyse MASCOT MS/MS search resultsQ33268182
Peptizer, a tool for assessing false positive peptide identifications and manually validating selected resultsQ33356312
OMSSA Parser: an open-source library to parse and extract data from OMSSA MS/MS search resultsQ33488264
Trans-Proteomic Pipeline supports and improves analysis of electron transfer dissociation data setsQ33524864
Quantitative analysis of SILAC data sets using spectral counting.Q33526796
XTandem Parser: an open-source library to parse and analyse X!Tandem MS/MS search resultsQ33530176
MassSieve: panning MS/MS peptide data for proteinsQ33610286
Tandem Mass Tags: A Novel Quantification Strategy for Comparative Analysis of Complex Protein Mixtures by MS/MSQ34192662
Comparison of spectral counting and metabolic stable isotope labeling for use with quantitative microbial proteomicsQ42043971
P433issue6
P921main subjectopen-source softwareQ1130645
data analysisQ1988917
P304page(s)1058-1063
P577publication date2011-02-07
P1433published inProteomicsQ15614164
P1476titleVisualize: a free and open source multifunction tool for proteomics data analysis
P478volume11

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cites work (P2860)
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