Statistics and bioinformatics in nutritional sciences: analysis of complex data in the era of systems biology

scientific article

Statistics and bioinformatics in nutritional sciences: analysis of complex data in the era of systems biology is …
instance of (P31):
scholarly articleQ13442814
review articleQ7318358

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P356DOI10.1016/J.JNUTBIO.2009.11.007
P932PMC publication ID2885517
P698PubMed publication ID20233650
P5875ResearchGate publication ID42108726

P2093author name stringArnold J Stromberg
Guoyao Wu
Raymond J Carroll
Wenjiang J Fu
Kert Viele
P2860cites workProtQuant: a tool for the label-free quantification of MudPIT proteomics dataQ21284217
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High fat feeding and dietary L-arginine supplementation differentially regulate gene expression in rat white adipose tissueQ28569883
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Preprocessing of tandem mass spectrometric data to support automatic protein identificationQ30818886
Conservation and implications of eukaryote transcriptional regulatory regions across multiple speciesQ30855812
Automated statistical analysis of protein abundance ratios from data generated by stable-isotope dilution and tandem mass spectrometryQ30884824
A correlation algorithm for the automated quantitative analysis of shotgun proteomics dataQ30885965
Sample size for FDR-control in microarray data analysisQ30987832
Exploration, normalization, and genotype calls of high-density oligonucleotide SNP array dataQ31088360
Sample size determination for the false discovery rate.Q33224562
Mass spectrometry-based metabolomicsQ33254576
High-resolution identification of chromosomal abnormalities using oligonucleotide arrays containing 116,204 SNPsQ34106761
DNA microarray experiments: biological and technological aspectsQ34166262
A method for assessing the statistical significance of mass spectrometry-based protein identifications using general scoring schemesQ34182025
Microarray analysis reveals a major direct role of DNA copy number alteration in the transcriptional program of human breast tumorsQ34190883
PepNovo: de novo peptide sequencing via probabilistic network modelingQ34414526
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NovoHMM: a hidden Markov model for de novo peptide sequencingQ34467135
Amino acids: metabolism, functions, and nutritionQ34966070
Molecular karyotyping using an SNP array for genomewide genotyping.Q35444340
Statistical significance of quantitative PCRQ35793975
Towards a systems biology understanding of human health: interplay between genotype, environment and nutritionQ35927574
Nutrigenomics and nutrigenetics: the emerging faces of nutritionQ36272895
Environmental toxicity, nutrition, and gene interactions in the development of atherosclerosisQ36738524
Mechanisms of colorectal and lung cancer prevention by vegetables: a genomic approachQ36891293
Functional proteomics to identify critical proteins in signal transduction pathways.Q36912829
Analysis of case-control studies of genetic and environmental factors with missing genetic information and haplotype-phase ambiguityQ36978323
PEPPeR, a platform for experimental proteomic pattern recognition.Q37113905
Mapping Nucleotide Sequences that Encode Complex Binary Disease Traits with HapMapQ37119988
Nutrition and mutagenesisQ37133315
Arginine metabolism and nutrition in growth, health and diseaseQ37179500
Functional genomics and SNP analysis of human genes encoding proline metabolic enzymesQ37255176
Advances in protein-amino acid nutrition of poultryQ37325538
Emerging technologies for amino acid nutrition research in the post-genome era.Q37326424
Hybridization modeling of oligonucleotide SNP arrays for accurate DNA copy number estimation.Q37385838
A multi-array multi-SNP genotyping algorithm for Affymetrix SNP microarrays.Q38302362
A robust algorithm for copy number detection using high-density oligonucleotide single nucleotide polymorphism genotyping arraysQ40396914
How many samples are needed to build a classifier: a general sequential approachQ40490945
An integrated view of copy number and allelic alterations in the cancer genome using single nucleotide polymorphism arraysQ40559185
Dietary supplementation with zinc oxide stimulates ghrelin secretion from the stomach of young pigsQ42443330
An integrated approach for automating validation of extracted ion chromatographic peaksQ43063743
Dietary modulation of mitochondrial DNA deletions and copy number after chemotherapy in ratsQ43948375
Power and sample size for DNA microarray studiesQ44219710
A genotype calling algorithm for affymetrix SNP arrays.Q46033042
Proteomic analysis reveals altered expression of proteins related to glutathione metabolism and apoptosis in the small intestine of zinc oxide-supplemented pigletsQ46138114
Metabolomic analysis of the response of growing pigs to dietary L-arginine supplementationQ46260515
Regulation of ornithine aminotransferase gene expression and activity by all-transretinoic acid in Caco-2 intestinal epithelial cellsQ46749681
False discovery rate, sensitivity and sample size for microarray studies.Q47384576
Sample size determination in microarray experiments for class comparison and prognostic classificationQ47397086
Sample size for gene expression microarray experimentsQ47399991
Estimation and tests of haplotype-environment interaction when linkage phase is ambiguousQ47724047
GEL: a novel genotype calling algorithm using empirical likelihoodQ48441112
Statistical models in assessing fold change of gene expression in real-time RT-PCR experiments.Q51631919
Gene selection using a two-level hierarchical Bayesian model.Q51636237
Performance evaluation of existing de novo sequencing algorithms.Q51929619
Dietary L-arginine supplementation reduces fat mass in Zucker diabetic fatty rats.Q54673457
Statistical design and the analysis of gene expression microarray dataQ73886317
Intrauterine growth restriction affects the proteomes of the small intestine, liver, and skeletal muscle in newborn pigsQ80400730
Gene expression is altered in piglet small intestine by weaning and dietary glutamine supplementationQ81311162
P433issue7
P407language of work or nameEnglishQ1860
P921main subjectstatisticsQ12483
bioinformaticsQ128570
systems biologyQ815297
P304page(s)561-572
P577publication date2010-03-16
P1433published inJournal of Nutritional BiochemistryQ15716705
P1476titleStatistics and bioinformatics in nutritional sciences: analysis of complex data in the era of systems biology
P478volume21

Reverse relations

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